BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0564.0038.p
         (155 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC3E7.02c [O] COG0071 Molecular chaperone (small heat shock pr...    50   1e-06
BH2272 [O] COG0071 Molecular chaperone (small heat shock protein)      49   3e-06

>SPBC3E7.02c [O] COG0071 Molecular chaperone (small heat shock protein)
          Length = 143

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 1/104 (0%)

Query: 39  MSFRTDIRESEQAYLIEAELPGFKKEEIDIDYASPYLTIKA-VRKEENSEENKDHQXXXX 97
           +S   D+ E +    ++ ELPG KKE++ + Y S  LTI   V  E  +E  + +Q    
Sbjct: 35  LSPSIDVHEGKDTVSVDVELPGVKKEDVQVHYDSGKLTISGEVVNERKNESTEGNQRWSE 94

Query: 98  XXXXXXXXXXXXXQDVAEDEIRASLKDGLLTLSVPKQQKSLGKR 141
                          +  D I A+  +GLLT+++PK +KS  K+
Sbjct: 95  RRFGSFSRTITIPAKIDADRIEANFSNGLLTVTLPKVEKSQTKK 138


>BH2272 [O] COG0071 Molecular chaperone (small heat shock protein)
          Length = 144

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 16/136 (11%)

Query: 7   FGKRRDDAFGVLAKSLNEVFNDDFFAPIKSSTMSFRTDIRESEQA--YLIEAELPGFKKE 64
           F +  DD F   +KS   + ++  FAP           IR+ E+   ++IEAELPG  K 
Sbjct: 18  FLRSIDDFF---SKSFQHLHDNGMFAP--------SIPIRQYEKGEQFIIEAELPGVSKN 66

Query: 65  EIDIDYASPYLTIKAVRKEENSEENKDHQXXXXXXXXXXXXXXXX--XQDVAEDEIRASL 122
           +I +D    Y+ I+ + +EE  E  +D +                     V E +I+A L
Sbjct: 67  QIQLDVFPQYVRIR-IHEEEVLEMREDEKGIYSKSISSQARERVIPFPYPVQEGDIKARL 125

Query: 123 KDGLLTLSVPKQQKSL 138
           ++GLLT+++P  +K +
Sbjct: 126 RNGLLTIAIPNHRKRI 141


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.312    0.132    0.354 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 9,386,783
Number of extensions: 288285
Number of successful extensions: 413
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 415
Number of HSP's successfully gapped: 5
Length of query: 155
Length of database: 38,378,431
Length adjustment: 97
Effective length of query: 58
Effective length of database: 27,191,033
Effective search space: 1577079914
Effective search space used: 1577079914
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 111 (47.4 bits)