BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0560.0027.p (418 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CAC2716 [GC] COG1819 Glycosyl transferases, related to UDP-glucu... 199 7e-51 BS_yjiC [GC] COG1819 Glycosyl transferases, related to UDP-glucu... 187 2e-47 BS_yojK [GC] COG1819 Glycosyl transferases, related to UDP-glucu... 184 2e-46 CAP0045 [GC] COG1819 Glycosyl transferases, related to UDP-glucu... 180 4e-45 BS_ydhE [GC] COG1819 Glycosyl transferases, related to UDP-glucu... 168 2e-41 >CAC2716 [GC] COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase Length = 407 Score = 199 bits (506), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 129/420 (30%), Positives = 207/420 (49%), Gaps = 29/420 (6%) Query: 1 MSKVIFLSYPFYSHVIPSXXXXXXXXXXXXXXIYYSVEAYKDAVEETGAVFRDYGDIIGL 60 MSKV+F+++P Y HV P+ Y+ + +K+++E GA F YG+ + Sbjct: 1 MSKVLFMNFPGYGHVNPTLGLVDELVKRGEEVYYFCTDEFKESIEAAGAKFISYGERMSN 60 Query: 61 LEAATDQINYAGYPTPVDILYSLVPSKILKSKKVVQRIVNRVLADNPDYIVRDCEAYWGR 120 + A AG + DI+ ++ ++ ++ I+ ++ DY+V G Sbjct: 61 FKNANKT---AGNRSYADIITKIIGM----TECEIEDILKKIKGMKFDYVVHCSMFCAGN 113 Query: 121 LLGNILDVPVVCYITTVALNNRMMDINKEGFMESVFSMSADSLPVAEKES-----VSQVL 175 ++ IL VP + A +M + P+ EKE VS+ Sbjct: 114 IIAQILKVPSISSFAVFATRKEVMKMQYS--------------PITEKELESNPIVSRAY 159 Query: 176 DHIAAGIAKEQGVEGYTVLDALAGGDEFNIVYTSREFQPYAETFGDNYVFIGPSVRASKE 235 + I K V+ + + +A + NI YT++EF E + D++ FIGP + KE Sbjct: 160 SEAKSRIEKRYFVKMPAISELMACRGDLNIAYTAKEFVSNIEYYDDSFKFIGPPIYKRKE 219 Query: 236 KTDFPFQKEADRPVLLIAFGNIFNNT-LELYKRCMEAFRDTGFSVIMSVGKKVDISLLGD 294 DFPF+K ++ V+ I+ G +FNNT LY EAF + V+MS +D S + Sbjct: 220 NLDFPFEKLKNKKVIYISLGTVFNNTNSNLYNIFFEAFGGSDVVVVMS-AYNIDTSNF-N 277 Query: 295 VPANFVVANQVPQVELMSQVDVFLSHGGYNSLSEAIDNHVPLVLFPQGADQVATSSRIEE 354 +P NF+V N VPQ E++ D ++H G NS S+ I N VP V P GADQ+ +SR +E Sbjct: 278 IPKNFIVRNYVPQTEILKYADAAITHAGMNSTSDLIYNKVPFVAIPIGADQLYMASRAKE 337 Query: 355 TGAGVYVRNQEISPVELLETVEGVYKNSEYRRNCEKLADSFRLSGGAKLGADAILAFISE 414 GA + + +++ EL E+V V ++ Y N EK+ D FR +GG + GA+ I F +E Sbjct: 338 LGAAIVLNKDKLTAKELRESVNKVMVDASYLENIEKIRDVFREAGGYRKGAEEIFKFKAE 397 >BS_yjiC [GC] COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase Length = 276 Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 0/380 (0%), Positives = 0/380 (0%), Gaps = 29/380 (7%) Query: 4 VIFLSYPFYSHVIPSXXXXXXXXXXXXXXIYYSVEAYKDAVEETGAVFRDYGDIIGLLEA 63 L + T +Y + Sbjct: 6 SNALQSQIITDAHFLHHPIVDSEFTRKLKYARMDSENIYLPPLTRGNNHNYDGKSVVEIR 65 Query: 64 ATDQINYAGYPTPVDILYSLVPSKILKSKKVVQRIVNRVLADNPDYIVRDCEAYWGRLLG 123 D +P + R+L N E Y G Sbjct: 66 KLDIS-KEPWPFNYVTGA--------CRESDGITTTGRMLYRNLKITSALDEIYGGICKK 116 Query: 124 NILDVPVVCYITTVALNNRMMDINKEGFMESVFSMSADSLPVAEKESVSQVLDHIAAGIA 183 + + + E + ++ + Sbjct: 117 AHATTELAEGLRLNL-FMKSPFDPVEDYTVHEITLGPGCNVPGYAGTTIGY--------- 166 Query: 184 KEQGVEGYTVLDALAGGDEFNIVYTSREFQPYAETFGDNYVFIGPSVRASKEKTDFPFQK 243 + A + R + V + Sbjct: 167 ---------ISTLPASQAKRWTNEQPRIDIYIDQIMTVTGVANSSGFALAALLNANIELG 217 Query: 244 EADRPVLLIAFGNIFNNTLELYKRCMEAFRDTGFSVIMSVGKKVDISLLGDVPANFVVAN 303 D + + A+ ++ + + + + + + Sbjct: 218 N-DPIIGIEAYPGTAEIHAKMGYKVIPGDENAPLKRMTLQPSSLPELFELKNGEWNYIGK 276 Query: 304 QVPQVELMSQVDVFLSHGGYNSLSEAIDNHVPLVLFPQGADQVATSSRIEETGAGVYVRN 363 Sbjct: 277 336 Query: 364 QEISPVELLETVEGVYKNSE 383 Sbjct: 337 356 >BS_yojK [GC] COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase Length = 287 Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 87/218 (39%), Positives = 133/218 (61%), Gaps = 1/218 (0%) Query: 197 LAGGDEFNIVYTSREFQPYAETFGDNYVFIGPSVRASKEKTDFPFQKEADRPVLLIAFGN 256 LA GD IV+TSR FQP AE FG+ YVF+GPS+ DFPF + + VL I+ G Sbjct: 64 LADGD-LTIVFTSRGFQPLAEQFGERYVFVGPSITERAGNNDFPFDQIDNENVLFISMGT 122 Query: 257 IFNNTLELYKRCMEAFRDTGFSVIMSVGKKVDISLLGDVPANFVVANQVPQVELMSQVDV 316 IFNN + + +C+E +D V++S+GK + S L D+P NF+V VPQ+E++ + + Sbjct: 123 IFNNQKQFFNQCLEVCKDFDGKVVLSIGKHIKTSELNDIPENFIVRPYVPQLEILKRASL 182 Query: 317 FLSHGGYNSLSEAIDNHVPLVLFPQGADQVATSSRIEETGAGVYVRNQEISPVELLETVE 376 F++HGG NS SE + PLV+ P G DQ + ++E+ GAG ++ +E+S L ET++ Sbjct: 183 FVTHGGMNSTSEGLYFETPLVVIPMGGDQFVVADQVEKVGAGKVIKKEELSESLLKETIQ 242 Query: 377 GVYKNSEYRRNCEKLADSFRLSGGAKLGADAILAFISE 414 V N Y +++ S + +GG+K AD+IL + + Sbjct: 243 EVMNNRSYAEKAKEIGQSLKAAGGSKKAADSILEAVKQ 280 >CAP0045 [GC] COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase Length = 406 Score = 180 bits (457), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 114/411 (27%), Positives = 203/411 (49%), Gaps = 17/411 (4%) Query: 1 MSKVIFLSYPFYSHVIPSXXXXXXXXXXXXXXIYYSVEAYKDAVEETGAVFRDYGDIIGL 60 M K++FL P Y HV P+ Y+ E +++ +E+TGA+F+DYG Sbjct: 1 MGKILFLGIPAYGHVNPTLGIISELVKRGQEVTYFCTEEFRERIEKTGAIFKDYG---SA 57 Query: 61 LEAATDQINYAGYPTPVDILYSLVPSKILKSKKVVQRIVNRVLADNPDYIVRDCEAYWGR 120 ++ + + +++ + L +++ + +K ++ ++++ DYI +G Sbjct: 58 MDPSNRKHHFSASNMTKETLIAIIEKSLDICEKAIESVLDKTNGTKFDYIGYAAACPFGS 117 Query: 121 LLGNILDVPVVCYITTVALNNRMMDINKEGFMESVFSMSADSLPVAEKESVSQVLDHIAA 180 LL IL +P A + +M + EG E S P+ EK + Sbjct: 118 LLAQILKLPSFSSFAIFATPDEIMPKSLEGITEE----SMKDTPIMEKYM------KLKY 167 Query: 181 GIAKEQGVEGYTVLDALAGGDEFNIVYTSREFQPYAETFGDNYVFIGPSVRASKEK-TDF 239 G+ ++ +E + + N YTS+ F P + + D++ FIGP + KE ++F Sbjct: 168 GLKEKYDIELPEIKKLFFNKGDVNFAYTSKYFIPNIQYYDDSFKFIGPPIYDRKEDLSNF 227 Query: 240 PFQKEADRPVLLIAFGNIFNN-TLELYKRCMEAFRDTGFSVIMSVGKKVDISLLGDVPAN 298 P+++ D+ V+ I+ G +++N ++LY+ AF++ V+M+ KVD+S D+P N Sbjct: 228 PYEEIKDKKVIYISLGTVYSNFDIKLYETFFNAFKNEDVVVVMT-AYKVDLSQF-DIPKN 285 Query: 299 FVVANQVPQVELMSQVDVFLSHGGYNSLSEAIDNHVPLVLFPQGADQVATSSRIEETGAG 358 FVV N + Q E++ + ++H G NS ++ + N VP V P GADQ +SR + GA Sbjct: 286 FVVRNYISQTEILKYANAAVTHSGMNSTNDLLFNSVPFVAIPLGADQPYMASRTADLGAC 345 Query: 359 VYVRNQEISPVELLETVEGVYKNSEYRRNCEKLADSFRLSGGAKLGADAIL 409 + + ++P L +V V N Y N K+ +SFR SGG K A+ +L Sbjct: 346 IKLDIDTLTPELLRNSVYEVMTNQNYMENIRKINNSFRESGGYKRAAEEVL 396 >BS_ydhE [GC] COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase Length = 381 Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 109/367 (29%), Positives = 179/367 (48%), Gaps = 30/367 (8%) Query: 34 YYSVEAYKDAVEETGAVFRDYGDIIGLLEAATDQINYAGYPTPVDILYSLVPSKILKSKK 93 Y S E YK +E GA + D++ T I + G P + V I S Sbjct: 20 YISTEKYKKRLEAAGATVHLHRDLL-----RTTPI-HVGSPNGI---LDFVKIHIKTSLD 70 Query: 94 VVQRIVNRVLADNPDYIVRDCEAYWGRLLGNILDVPVVCYITTVALNNRMMDINKEGFME 153 ++Q + + + D++ D + G L+ + LD+P V + + I Sbjct: 71 ILQIVKDLSKSIQFDFVYYD-KFGAGELVRDYLDIPGVSSSASFLFGEEHLKI------- 122 Query: 154 SVFSMSADSLPVAEKESVSQVLDH----IAAGIAKEQGVEGYTVLDALAGGDEFNIVYTS 209 LP+ + LD + A + + GV ++ + E N+VYTS Sbjct: 123 ---------LPLHPESGAPLELDQECEDLLAKMKETYGVAPKNLVQFMNNKGELNVVYTS 173 Query: 210 REFQPYAETFGDNYVFIGPSVRASKEKTDFPFQKEADRPVLLIAFGNIFNNTLELYKRCM 269 R FQP ++ FGD +FIGPS EKTDFP ++ D V+ I+ G + ++T + + C+ Sbjct: 174 RYFQPESDRFGDECLFIGPSFPKRAEKTDFPIEQLKDEKVIYISMGTVLDHTEDFFNLCI 233 Query: 270 EAFRDTGFSVIMSVGKKVDISLLGDVPANFVVANQVPQVELMSQVDVFLSHGGYNSLSEA 329 +AF V+++ G+K D++ L P NF++A VPQ+E++ Q DVF++HGG NS++E Sbjct: 234 DAFSGFNGKVVIAAGEKADLTKLKQAPENFIIAPYVPQLEVLEQSDVFITHGGMNSVNEG 293 Query: 330 IDNHVPLVLFPQGADQVATSSRIEETGAGVYVRNQEISPVELLETVEGVYKNSEYRRNCE 389 I VPLV+ P DQ + R+ E AG + E++ L + V+ V +N +Y + Sbjct: 294 IHFSVPLVVMPHDKDQPMVAQRLSELHAGYVISKDEVNAQILKQAVDEVLRNDQYTAGIK 353 Query: 390 KLADSFR 396 K+ SF+ Sbjct: 354 KINQSFK 360 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.319 0.137 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 29,660,178 Number of extensions: 1255246 Number of successful extensions: 3288 Number of sequences better than 1.0e-05: 18 Number of HSP's gapped: 3275 Number of HSP's successfully gapped: 18 Length of query: 418 Length of database: 38,378,431 Length adjustment: 109 Effective length of query: 309 Effective length of database: 25,807,025 Effective search space: 7974370725 Effective search space used: 7974370725 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 117 (49.7 bits)