BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0560.0004.p
         (110 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L120883 [R] COG0110 Acetyltransferase (isoleucine patch superfam...   148   2e-36
SA2342 [R] COG0110 Acetyltransferase (isoleucine patch superfamily)   105   1e-23
ZlacA [R] COG0110 Acetyltransferase (isoleucine patch superfamily)    102   1e-22
ECs0395 [R] COG0110 Acetyltransferase (isoleucine patch superfam...   102   1e-22
ZlacA [R] COG0110 Acetyltransferase (isoleucine patch superfamily)    102   1e-22

>L120883 [R] COG0110 Acetyltransferase (isoleucine patch superfamily)
          Length = 203

 Score =  148 bits (373), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 70/105 (66%), Positives = 82/105 (78%)

Query: 1   MIILDCNEVKIGNNVFIGPRAGLYAANHAEDPFERAEKGVYSAPIIIQDNVWLGGDVKIT 60
           MIILDCN+V IGNNV+ GPR GL+AANH+EDP  R   GVYS PI + + VWLG +V + 
Sbjct: 89  MIILDCNQVTIGNNVYFGPRCGLFAANHSEDPSLRTAGGVYSKPITVGNQVWLGANVSLL 148

Query: 61  QGVTIGENSIIGAGSVVTKDIPPNTIAAGVPCKVIRPIKYSDNPW 105
            GV+IG+NSIIGAGSVVTKDIP N IAAG PC+VIRPI+  D  W
Sbjct: 149 PGVSIGDNSIIGAGSVVTKDIPENVIAAGNPCQVIRPIRTEDQEW 193


>SA2342 [R] COG0110 Acetyltransferase (isoleucine patch superfamily)
          Length = 199

 Score =  105 bits (263), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 51/96 (53%), Positives = 64/96 (66%)

Query: 3   ILDCNEVKIGNNVFIGPRAGLYAANHAEDPFERAEKGVYSAPIIIQDNVWLGGDVKITQG 62
            +D  ++ IG+NVFIGP  G Y A H  + + R E    + PI I  N W GG V +  G
Sbjct: 89  FMDGGQITIGDNVFIGPNCGFYTATHPLNFYHRNEGYEKAGPIHIGSNTWFGGHVAVLPG 148

Query: 63  VTIGENSIIGAGSVVTKDIPPNTIAAGVPCKVIRPI 98
           VTIGE S+IGAGSVVTKDIPP+++A G PCKV+R I
Sbjct: 149 VTIGEGSVIGAGSVVTKDIPPHSLAVGNPCKVVRKI 184


>ZlacA [R] COG0110 Acetyltransferase (isoleucine patch superfamily)
          Length = 203

 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/105 (51%), Positives = 66/105 (62%)

Query: 1   MIILDCNEVKIGNNVFIGPRAGLYAANHAEDPFERAEKGVYSAPIIIQDNVWLGGDVKIT 60
           + I+D   V IG+NV I P   L    H      R    +YS PI I +NVW+G  V I 
Sbjct: 88  LTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVIN 147

Query: 61  QGVTIGENSIIGAGSVVTKDIPPNTIAAGVPCKVIRPIKYSDNPW 105
            GVTIG+NS+IGAGS+VTKDIPPN +AAGVPC+VIR I   D  +
Sbjct: 148 PGVTIGDNSVIGAGSIVTKDIPPNVVAAGVPCRVIREINDRDKQY 192


>ECs0395 [R] COG0110 Acetyltransferase (isoleucine patch superfamily)
          Length = 203

 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/105 (51%), Positives = 66/105 (62%)

Query: 1   MIILDCNEVKIGNNVFIGPRAGLYAANHAEDPFERAEKGVYSAPIIIQDNVWLGGDVKIT 60
           + I+D   V IG+NV I P   L    H      R    +YS PI I +NVW+G  V I 
Sbjct: 88  LTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVIN 147

Query: 61  QGVTIGENSIIGAGSVVTKDIPPNTIAAGVPCKVIRPIKYSDNPW 105
            GVTIG+NS+IGAGS+VTKDIPPN +AAGVPC+VIR I   D  +
Sbjct: 148 PGVTIGDNSVIGAGSIVTKDIPPNVVAAGVPCRVIREINDRDKQY 192



 Score =  102 bits (254), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/105 (51%), Positives = 66/105 (62%)

Query: 1   MIILDCNEVKIGNNVFIGPRAGLYAANHAEDPFERAEKGVYSAPIIIQDNVWLGGDVKIT 60
           + I+D   V IG+NV I P   L    H      R    +YS PI I +NVW+G  V I 
Sbjct: 88  LTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVIN 147

Query: 61  QGVTIGENSIIGAGSVVTKDIPPNTIAAGVPCKVIRPIKYSDNPW 105
            GVTIG+NS+IGAGS+VTKDIPPN +AAGVPC+VIR I   D  +
Sbjct: 148 PGVTIGDNSVIGAGSIVTKDIPPNVVAAGVPCRVIREINDRDKQY 192


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.317    0.139    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 8,571,718
Number of extensions: 319874
Number of successful extensions: 820
Number of sequences better than 1.0e-05: 98
Number of HSP's gapped: 805
Number of HSP's successfully gapped: 98
Length of query: 110
Length of database: 38,378,431
Length adjustment: 78
Effective length of query: 32
Effective length of database: 29,382,379
Effective search space: 940236128
Effective search space used: 940236128
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 109 (46.6 bits)