BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0557.0074.p (334 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BH2883 [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 361 e-100 FN0148 [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 355 8e-98 BS_yjaX [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 346 3e-95 CAC3578 [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 336 3e-92 XF1817 [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 322 4e-88 >BH2883 [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III Length = 312 Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust. Identities = 176/322 (54%), Positives = 232/322 (72%), Gaps = 16/322 (4%) Query: 13 GIIGTGKYVPEQILTNSDLEKMVETNDEWIVSRTGIRERHIAAPHEATSDLAYEAALKAL 72 GI+G G YV E ++TN D EK ++T+DEWI +RTGI ER A + TSD+AYEA++KAL Sbjct: 5 GILGIGSYVGEHVVTNKDFEKRIDTSDEWIRTRTGIEERRFAPDNVDTSDMAYEASVKAL 64 Query: 73 DSAGMKAEDLDLIIVATVTPDSTVPSTACILQDKLGAKGAAAFDLSAACSGFVYSLATAT 132 +AG+ AE++DLI+VATVTPD P+ + ++Q +LGAK AAA D+SAAC+GF+Y LAT Sbjct: 65 KAAGVSAEEIDLILVATVTPDMPFPTVSTLVQQRLGAKKAAAMDISAACAGFIYGLATGQ 124 Query: 133 GFIQNGMYNNALVIGADTLSRITDYTDRNTCVLFGDGAGAVIIGEVPEGRGFQSFDLGAE 192 FI+NG Y + LVIG + LS+ITD TDRNT VLFGDGAGA ++G V E RG +++LGA+ Sbjct: 125 QFIENGGYKHVLVIGVEKLSKITDMTDRNTAVLFGDGAGAAVMGAVSEDRGILAYELGAD 184 Query: 193 GSGGSLLNIEAGGSRLPASHQTIEDKKHFLYMNGREVFKFAVRVMGTATERVLTKAGLGK 252 G G A H I K ++ MNGREVFKFAVR MG + VL KAGL K Sbjct: 185 GEG--------------AMH--INQKGEYIQMNGREVFKFAVRQMGESALSVLEKAGLSK 228 Query: 253 ENIDLFIPHQANIRIIQSAMQRLDLPPEKCVINVDKYANTSAASIPLALVEAAEEGRIKE 312 E++D IPHQANIRI++++ +RL+LP EK V KY NTS+ASIP+A+V+ ++G+IK+ Sbjct: 229 EDVDFLIPHQANIRIMEASRERLELPVEKMSTTVKKYGNTSSASIPMAMVDELKDGKIKD 288 Query: 313 GDTLLMVGFGGGLTWGASVLIW 334 GD L++VGFG GL WG+ L W Sbjct: 289 GDLLVLVGFGAGLVWGSLALRW 310 >FN0148 [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III Length = 328 Score = 355 bits (910), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 165/326 (50%), Positives = 233/326 (71%) Query: 9 LRPVGIIGTGKYVPEQILTNSDLEKMVETNDEWIVSRTGIRERHIAAPHEATSDLAYEAA 68 ++ +GI G G YVPE + TN D EK+++T+DEWI +RTGI ER A+ +ATSDLA EA+ Sbjct: 1 MQSIGIKGMGYYVPENVFTNFDFEKIIDTSDEWIRTRTGIIERRFASKDQATSDLATEAS 60 Query: 69 LKALDSAGMKAEDLDLIIVATVTPDSTVPSTACILQDKLGAKGAAAFDLSAACSGFVYSL 128 LKA+ +A + ED+D+II+AT T D ACI+Q+KLG K FDL+AAC+GF+Y L Sbjct: 61 LKAIKNAKISKEDVDMIILATTTADYIAQGAACIVQNKLGLKKIPCFDLNAACTGFIYGL 120 Query: 129 ATATGFIQNGMYNNALVIGADTLSRITDYTDRNTCVLFGDGAGAVIIGEVPEGRGFQSFD 188 A +++G+Y N LVIGA+TLSRI D +RNTCVLFGDGA A IIGEV +G GF F Sbjct: 121 EVAYSLVKSGLYKNILVIGAETLSRIVDMQNRNTCVLFGDGAAAAIIGEVEKGYGFLGFS 180 Query: 189 LGAEGSGGSLLNIEAGGSRLPASHQTIEDKKHFLYMNGREVFKFAVRVMGTATERVLTKA 248 +GAEG +L + AGGS+ P + +TI+++++F+ M G++VFKFAV + T L KA Sbjct: 181 IGAEGEDNMILKVPAGGSKKPNNEETIKNRENFVIMKGQDVFKFAVSTLPKVTSDALEKA 240 Query: 249 GLGKENIDLFIPHQANIRIIQSAMQRLDLPPEKCVINVDKYANTSAASIPLALVEAAEEG 308 L ++ + PHQAN+RII+SA +R+ P EK +N+ +Y NTS+AS+ +AL EA E+G Sbjct: 241 KLKVNDLSMVFPHQANLRIIESAAKRMKFPLEKFYMNLSRYGNTSSASVGIALGEAIEKG 300 Query: 309 RIKEGDTLLMVGFGGGLTWGASVLIW 334 +K+GD + + GFGGGLT+G++++ W Sbjct: 301 LVKKGDNIALTGFGGGLTYGSTIIKW 326 >BS_yjaX [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III Length = 312 Score = 346 bits (888), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 180/322 (55%), Positives = 236/322 (73%), Gaps = 15/322 (4%) Query: 13 GIIGTGKYVPEQILTNSDLEKMVETNDEWIVSRTGIRERHIAAPHEATSDLAYEAALKAL 72 GI+G G+Y+PE++LTN DLEKMVET+DEWI +RTGI ER IAA +S +A AA AL Sbjct: 4 GILGVGRYIPEKVLTNHDLEKMVETSDEWIRTRTGIEERRIAADDVFSSHMAVAAAKNAL 63 Query: 73 DSAGMKAEDLDLIIVATVTPDSTVPSTACILQDKLGAKGAAAFDLSAACSGFVYSLATAT 132 + A + AEDLD+I+VATVTPD + P+ +C++Q++LGAK A A D+SAAC+GF+Y + T Sbjct: 64 EQAEVAAEDLDMILVATVTPDQSFPTVSCMIQEQLGAKKACAMDISAACAGFMYGVVTGK 123 Query: 133 GFIQNGMYNNALVIGADTLSRITDYTDRNTCVLFGDGAGAVIIGEVPEGRGFQSFDLGAE 192 FI++G Y + LV+G + LS ITD+ DRNT VLFGDGAGA ++G V + RG SF+LGA+ Sbjct: 124 QFIESGTYKHVLVVGVEKLSSITDWEDRNTAVLFGDGAGAAVVGPVSDDRGILSFELGAD 183 Query: 193 GSGGSLLNIEAGGSRLPASHQTIEDKKHFLYMNGREVFKFAVRVMGTATERVLTKAGLGK 252 G+GG H + +K+H + MNGREVFKFAVR MG + V+ KAGL K Sbjct: 184 GTGG--------------QHLYLNEKRHTI-MNGREVFKFAVRQMGESCVNVIEKAGLSK 228 Query: 253 ENIDLFIPHQANIRIIQSAMQRLDLPPEKCVINVDKYANTSAASIPLALVEAAEEGRIKE 312 E++D IPHQANIRI+++A +RL+LP EK V KY NTSAASIP++LVE E G+IK+ Sbjct: 229 EDVDFLIPHQANIRIMEAARERLELPVEKMSKTVHKYGNTSAASIPISLVEELEAGKIKD 288 Query: 313 GDTLLMVGFGGGLTWGASVLIW 334 GD ++MVGFGGGLTWGA + W Sbjct: 289 GDVVVMVGFGGGLTWGAIAIRW 310 >CAC3578 [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III Length = 325 Score = 336 bits (861), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 172/327 (52%), Positives = 235/327 (71%), Gaps = 5/327 (1%) Query: 9 LRPVGIIGTGKYVPEQILTNSDLEKMVETNDEWIVSRTGIRERHIAAPHEATSDLAYEAA 68 + V IIGTG YVPE+I+TN D+ K+V+T+DEWI SRTGI+ER I+ +E TSDL +AA Sbjct: 1 MNSVEIIGTGSYVPEKIVTNEDMSKIVDTSDEWISSRTGIKERRISI-NENTSDLGAKAA 59 Query: 69 LKALDSAGMKAEDLDLIIVATVTPDSTVPSTACILQDKLGAKGAAAFDLSAACSGFVYSL 128 L+A++ + +K E++DLIIVAT +PDS PS ACI+Q+K+GAK AA FDL+AAC+GF+++L Sbjct: 60 LRAIEDSNIKPEEIDLIIVATTSPDSYTPSVACIVQEKIGAKNAACFDLNAACTGFIFAL 119 Query: 129 ATATGFIQNGMYNNALVIGADTLSRITDYTDRNTCVLFGDGAGAVIIGEVPEGRGFQSFD 188 TA+ FI+ G Y ALV+G + LS+I D+ DR TCVLFGDGAGAVII E G Sbjct: 120 NTASQFIKTGEYKTALVVGTEVLSKILDWQDRGTCVLFGDGAGAVIIRGGDE-NGIIKAC 178 Query: 189 LGAEGSGGSLLNIEAGGSRLPASHQT-IEDKKHFLYMNGREVFKFAVRVMGTATERVLTK 247 LG++G+G L+ A P S + + K + MNGREVFKFAV+VM ++ ++V+ Sbjct: 179 LGSDGTGKDFLHCPATNVINPFSDEKGLASSK--ISMNGREVFKFAVKVMVSSVKKVIED 236 Query: 248 AGLGKENIDLFIPHQANIRIIQSAMQRLDLPPEKCVINVDKYANTSAASIPLALVEAAEE 307 +GL E+ID +PHQANIRII+ A ++L L +K IN+ Y NTS A+IPLA+ E ++ Sbjct: 237 SGLNIEDIDYIVPHQANIRIIEFAAKKLGLSMDKFFINLQNYGNTSGATIPLAIDEMNKK 296 Query: 308 GRIKEGDTLLMVGFGGGLTWGASVLIW 334 G +K G +++VGFGGGLTWG+ VL W Sbjct: 297 GLLKRGAKIVVVGFGGGLTWGSMVLKW 323 >XF1817 [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III Length = 324 Score = 322 bits (826), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 165/319 (51%), Positives = 218/319 (68%), Gaps = 5/319 (1%) Query: 14 IIGTGKYVPEQILTNSDLEKMVETNDEWIVSRTGIRERHIAAPHEATSDLAYEAALKALD 73 I GTG Y+PE++LTN DL +V+T+DEWI +RTGIRERHIAA E TSDLAYEAA+ AL+ Sbjct: 9 IAGTGGYLPEKVLTNDDLAHIVDTSDEWIRTRTGIRERHIAAEGETTSDLAYEAAICALE 68 Query: 74 SAGMKAEDLDLIIVATVTPDSTVPSTACILQDKLGAKGAAAFDLSAACSGFVYSLATATG 133 +A +++ DLDLI+V T TPD PSTAC+LQ +LGA G AFD++AACSGFVY+L+ A Sbjct: 69 AAEVRSADLDLIVVGTTTPDLIFPSTACLLQARLGAVGCGAFDVNAACSGFVYALSVAEK 128 Query: 134 FIQNGMYNNALVIGADTLSRITDYTDRNTCVLFGDGAGAVIIGEVPEGRGFQSFDLGAEG 193 F+ +G LV+GADTL+RI D++DR TCVLFGDGAGAV++ + E G S L A+G Sbjct: 129 FVSSGCSKTVLVVGADTLTRIIDWSDRTTCVLFGDGAGAVVL-KADEDTGILSTHLHADG 187 Query: 194 SGGSLLNIEAGGSRLPASHQTIEDKKHFLYMNGREVFKFAVRVMGTATERVLTKAGLGKE 253 S LL G S + L M G EVFK+AV+ + + L L K Sbjct: 188 SKKELLWDPVGVSVGFGEGKDC----GALLMKGNEVFKYAVKALDRVVDETLEANHLDKH 243 Query: 254 NIDLFIPHQANIRIIQSAMQRLDLPPEKCVINVDKYANTSAASIPLALVEAAEEGRIKEG 313 +D IPHQAN+RII++ +RLD+ ++ V+ VD++ NTS AS+PLAL EA GR++ G Sbjct: 244 ELDWLIPHQANLRIIEATARRLDMSMDQVVVTVDRHGNTSTASVPLALDEAIRSGRVQRG 303 Query: 314 DTLLMVGFGGGLTWGASVL 332 LL+ FGGG TWG+++L Sbjct: 304 QLLLLEAFGGGFTWGSALL 322 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.317 0.134 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 24,461,668 Number of extensions: 1051323 Number of successful extensions: 5186 Number of sequences better than 1.0e-05: 44 Number of HSP's gapped: 5114 Number of HSP's successfully gapped: 44 Length of query: 334 Length of database: 38,378,431 Length adjustment: 107 Effective length of query: 227 Effective length of database: 26,037,693 Effective search space: 5910556311 Effective search space used: 5910556311 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 116 (49.3 bits)