BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0556.0002.p (526 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value MA1747 [P] COG1122 ABC-type cobalt transport system, ATPase comp... 253 8e-67 Cgl0519 [P] COG1122 ABC-type cobalt transport system, ATPase com... 221 3e-57 SP0483 [P] COG1122 ABC-type cobalt transport system, ATPase comp... 200 4e-51 ZybhF [V] COG1131 ABC-type multidrug transport system, ATPase co... 162 2e-39 ybhF [V] COG1131 ABC-type multidrug transport system, ATPase com... 162 2e-39 >MA1747 [P] COG1122 ABC-type cobalt transport system, ATPase component Length = 614 Score = 253 bits (645), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 174/513 (33%), Positives = 266/513 (51%), Gaps = 35/513 (6%) Query: 1 VLLGPSGGGKTTLLRHLKRELAPV--GKAGGKIAYKGQPLSGLPAELAAAEIGMVFQNPD 58 +L GPSG GK+TL+R L R + V G G++ +G+ L+ A E+GMVFQNP+ Sbjct: 42 LLAGPSGCGKSTLVRCLNRLVPEVSGGSFSGRVLLRGKDLTHEKVHSLALEVGMVFQNPE 101 Query: 59 AQIVMDTVWHELAFSMENMGYPPAVMRSRLAEIAGLFGLEPLLYKSVHELSGGQKQLLNL 118 Q+ TV +LAF EN+G P +R R+ ++ GL+ L + LSGG+KQ + Sbjct: 102 TQLFSLTVAEDLAFGPENLGLPGEEIRIRVKKVLKEVGLKGLEDHFIFTLSGGEKQRTAI 161 Query: 119 ASVLMLQPKLLLLDEPTSQLDPVAAREFLQTLHRLNEEMSVTVIISEHRLEEVLPLADRV 178 L +QP++L+LDEPTS LDP E L+ L LN E T+I+ EH+L+ V + DR+ Sbjct: 162 GGNLAMQPEILVLDEPTSDLDPAGTGEVLELLKHLNAENRTTLILIEHKLDAVFEMVDRM 221 Query: 179 LLLEEGELRFQGTP-----RDFVRGAGLALHAPHMAYLPTAARLFLALEPDAVQAPREAI 233 L+++EG + G P R+ + L +H P + F + +I Sbjct: 222 LVMDEGRVILDGKPFEILCREEEKLRKLGIHPPQFTEIARFLGFF---------SENSSI 272 Query: 234 PLTVREGKRWLHSLAERGPGMGEAAADTGASRLSAPV-----TSSDLLLSCREVTFRYSK 288 P KR L + + S + AP T +L+ ++ +R+ + Sbjct: 273 PAYETLLKRLTELLQASEVEIHPEDLEKRESEIPAPAPQPRNTPPHVLIE--QLCYRH-E 329 Query: 289 DGAEVLKKLSLSLYRGELLAVMGGNGAGKSTLLHILNGLLKPQRGKVTLAKGETS----- 343 DG+E +KL+L + RGE LA++G NGAGK+TL L G +P G++ L + S Sbjct: 330 DGSEAFEKLNLEIKRGEFLALLGHNGAGKTTLAGHLIGFYRPASGRILLDGKDISGYSTA 389 Query: 344 ------GFLAQNPLLYFSYDTVQEELQQMAEYAGLSKEEADREIARLLAIFQLEDLLLSH 397 G+L QNP ++V EE+ E G+ +E+ + L + +L H Sbjct: 390 RLSKQVGYLFQNPDSQIFTNSVFEEVCFGLENLGMPEEKIKKLADSALEMMELSAYRNRH 449 Query: 398 PHDISGGQQQKLALAMVMLLGPGILLLDEPTKGLDPGAKERLAALLGDLRRQGVSILLVT 457 PH +S GQ+Q+LA+A ++ L P +L+LDEPT G D G + + L G +++L+T Sbjct: 450 PHALSRGQRQRLAVASILALEPDLLILDEPTTGQDRGHIRKFLDKIRKLNGLGKTVILIT 509 Query: 458 HDVEFAARYASRCAMLFDGGITSEGTPAEFFSS 490 HD+E AA YA R ++ G I +G AE FSS Sbjct: 510 HDMELAAEYAERVVVMKQGKIFLDGPTAEVFSS 542 Score = 80.5 bits (197), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 19/227 (8%) Query: 281 EVTFRYSKDGAEVLKKLSLSLYRGELLAVMGGNGAGKSTLLHILNGLLKPQ------RGK 334 ++T+ Y A L ++L L +GE + + G +G GKSTL+ LN L+ P+ G+ Sbjct: 15 KITYNYPYSDAAALSDVNLELKKGEFVLLAGPSGCGKSTLVRCLNRLV-PEVSGGSFSGR 73 Query: 335 VTLAKGETS-----------GFLAQNPLLYFSYDTVQEELQQMAEYAGLSKEEADREIAR 383 V L + + G + QNP TV E+L E GL EE + + Sbjct: 74 VLLRGKDLTHEKVHSLALEVGMVFQNPETQLFSLTVAEDLAFGPENLGLPGEEIRIRVKK 133 Query: 384 LLAIFQLEDLLLSHPHDISGGQQQKLALAMVMLLGPGILLLDEPTKGLDPGAKERLAALL 443 +L L+ L +SGG++Q+ A+ + + P IL+LDEPT LDP + LL Sbjct: 134 VLKEVGLKGLEDHFIFTLSGGEKQRTAIGGNLAMQPEILVLDEPTSDLDPAGTGEVLELL 193 Query: 444 GDLRRQG-VSILLVTHDVEFAARYASRCAMLFDGGITSEGTPAEFFS 489 L + +++L+ H ++ R ++ +G + +G P E Sbjct: 194 KHLNAENRTTLILIEHKLDAVFEMVDRMLVMDEGRVILDGKPFEILC 240 >Cgl0519 [P] COG1122 ABC-type cobalt transport system, ATPase component Length = 569 Score = 221 bits (562), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 164/525 (31%), Positives = 264/525 (50%), Gaps = 57/525 (10%) Query: 1 VLLGPSGGGKTTLLRHLKREL--APVGKAGGKIAYKGQPLSGLPAELAAAEIGMVFQNPD 58 +++G +G GK+TLL + + A G+ G++ G+ P + + +G+V Q+P Sbjct: 52 LVVGRTGSGKSTLLNAMSGAMPHATGGRLDGRVRVVGRDTRDFPPRMLSDVVGVVGQDPA 111 Query: 59 AQIVMDTVWHELAFSMENMGYPPAVMRSRLAEIAGLFGLEPLLYKSVHELSGGQKQLLNL 118 A + +TV ELA+SME +G PPAVMR R+ E L G+ L Y + ELSGG++Q + + Sbjct: 112 ASFITNTVEEELAYSMEQLGLPPAVMRKRVEETLDLLGIAELRYVPLAELSGGEQQRVAI 171 Query: 119 ASVLMLQPKLLLLDEPTSQLDPVAAREFLQTLHRLNEEMSVTVIISEHRLEEVLPLADRV 178 +VL +P L++LDEPTS LDP A + L T+ +L ++++TV+++EHR+E VL DRV Sbjct: 172 GAVLTTRPALIILDEPTSALDPNGAEDVLATVTKLAHDLAMTVVLAEHRIERVLQYVDRV 231 Query: 179 LLLEEGELRFQGTPRDFVRGAGLALHAPHMAYLPTAARLFLALEPDAVQAPREA----IP 234 + GTP + + + +A P V+ R A +P Sbjct: 232 AHVGADGHVTVGTPEEIMADSDVA--------------------PPIVELGRWAGWAPLP 271 Query: 235 LTVREGKRWLHSLAERGPGMGEAAADTGASRLSAPVTSSDLLLSCREVTFRYSKDGAEVL 294 L++R+ + + +R G + + + D+++ E+ + DG Sbjct: 272 LSIRDARAHSADMRKRLYQRGLVVNKLHNHAVQPLLIAEDIMVDFPEI---RAVDG---- 324 Query: 295 KKLSLSLYRGELLAVMGGNGAGKSTLLHILNGLLKPQRGKVTLAKGETSGFLAQNP---- 350 ++L+L GE+ +MG NG GKS+LL L G +G V + E +GF +P Sbjct: 325 --VNLNLNSGEITVLMGRNGCGKSSLLWALQGSGTRNQGSVQVLD-EAAGFSWTDPKTLK 381 Query: 351 ------LLYFSYDTVQEELQQMAEYAGLSKEEAD--------REIARLLAIFQLEDLLLS 396 L+ T + L + +A L++ + D REI L + + D L Sbjct: 382 PAKRRNLVSMVPQTPTDILYESTVHAELARSDKDAAAPAGTTREILDSL-VPNIPDHL-- 438 Query: 397 HPHDISGGQQQKLALAMVMLLGPGILLLDEPTKGLDPGAKERLAALLGDLRRQGVSILLV 456 HP D+S GQ+ LAL++ + P ++ DEPT+GLD K+ LA L G +IL+V Sbjct: 439 HPRDLSEGQKLSLALSIQLAAKPRVVFFDEPTRGLDYDGKKSLARSFQQLADDGHAILVV 498 Query: 457 THDVEFAARYASRCAMLFDGGITSEGTPAEFFSSNYFYTTAVNRM 501 THDVEF+A A R + G I S+GT E ++ Y V ++ Sbjct: 499 THDVEFSALCADRVLFMASGKIISDGTAVEILPASPAYAPQVAKI 543 Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 73/252 (28%), Positives = 124/252 (49%), Gaps = 26/252 (10%) Query: 266 LSAPVT-----SSDLLLSCREVTFRYSKD----GAEVLKKLSLSLYRGELLAVMGGNGAG 316 +SAP + S+D +L V Y D A + ++L+L+ GE+L V+G G+G Sbjct: 1 MSAPFSARTAWSTDPVLELESVAASYYDDERTLAAPQISDVNLTLFEGEILLVVGRTGSG 60 Query: 317 KSTLLHILNGLLKPQR-----GKVTLAKGETSGF-----------LAQNPLLYFSYDTVQ 360 KSTLL+ ++G + G+V + +T F + Q+P F +TV+ Sbjct: 61 KSTLLNAMSGAMPHATGGRLDGRVRVVGRDTRDFPPRMLSDVVGVVGQDPAASFITNTVE 120 Query: 361 EELQQMAEYAGLSKEEADREIARLLAIFQLEDLLLSHPHDISGGQQQKLALAMVMLLGPG 420 EEL E GL + + L + + +L ++SGG+QQ++A+ V+ P Sbjct: 121 EELAYSMEQLGLPPAVMRKRVEETLDLLGIAELRYVPLAELSGGEQQRVAIGAVLTTRPA 180 Query: 421 ILLLDEPTKGLDP-GAKERLAALLGDLRRQGVSILLVTHDVEFAARYASRCAMLFDGGIT 479 +++LDEPT LDP GA++ LA + ++++L H +E +Y R A + G Sbjct: 181 LIILDEPTSALDPNGAEDVLATVTKLAHDLAMTVVLAEHRIERVLQYVDRVAHVGADGHV 240 Query: 480 SEGTPAEFFSSN 491 + GTP E + + Sbjct: 241 TVGTPEEIMADS 252 >SP0483 [P] COG1122 ABC-type cobalt transport system, ATPase component Length = 560 Score = 200 bits (509), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 144/505 (28%), Positives = 256/505 (50%), Gaps = 38/505 (7%) Query: 1 VLLGPSGGGKTTLLRHLKRELAPV--GKAGGKIAYKGQPLSGLPAELAAAEIGMVFQNPD 58 +++GPSG GK+TL + L + + G+ G+ KGQ + + + V Q+ D Sbjct: 37 LIVGPSGSGKSTLGQCLNGIIPNIYKGQTYGEFLIKGQVAFDMSIYDKSHLVSTVLQDTD 96 Query: 59 AQIVMDTVWHELAFSMENMGYPPAVMRSRLAEIAGLFGLEPLLYKSVHELSGGQKQLLNL 118 Q + +V +LAF++EN M+ R+ + A L PLL + +LSGGQKQ ++L Sbjct: 97 GQFIGLSVAEDLAFALENDVTALDEMKGRVYKWAEKLDLLPLLDQRPQDLSGGQKQRVSL 156 Query: 119 ASVLMLQPKLLLLDEPTSQLDPVAAREFLQTLHRLNEEMSVTVIISEHRLEEVLPL-ADR 177 A VL+ + +LL DEP + LDP + ++ ++ + ++++E T +I EHRLE+VL DR Sbjct: 157 AGVLIDESPILLFDEPLANLDPKSGQDIIELIDQIHKEEGTTTLIIEHRLEDVLHRPVDR 216 Query: 178 VLLLEEGELRFQGTPRDFVRGAGLALHAPHMA-YLPTAARLFLALEPDAVQAPREAIPLT 236 ++L+ +G + F G+P + L + YL T +L + L + A + L+ Sbjct: 217 IVLINDGRILFNGSPDQLLATDLLTQNGIREPLYLTTLRQLGVDLVKEEQLANLDN--LS 274 Query: 237 VREGKRWLHS-LAERGPGMGEAAADTGASRLSAPVTSSDLLLSCREVTFRYSKDGAEVLK 295 + +G+ L + LA+ P + L EV+F Y D +LK Sbjct: 275 ISKGQVQLQNELAKETPALQS-------------------LFRLEEVSFSY--DDRPILK 313 Query: 296 KLSLSLYRGELLAVMGGNGAGKSTLLHILNGLLKPQ----------RGKVTLAKGETSGF 345 L L + +GE +A++G NGAGKSTL ++ ++ + +G + E G+ Sbjct: 314 SLHLDIKKGEKIAIVGKNGAGKSTLAKAISSFIQTEGRYLWEKQDIKGDSVAERAERVGY 373 Query: 346 LAQNPLLYFSYDTVQEELQQMAEYAGLSKEEADREIARLLAIFQLEDLLLSHPHDISGGQ 405 + QNP S + + +E+ G+ ++E + + L I L + +S GQ Sbjct: 374 VLQNPNQMISTNMIFDEVALGLRLRGVDEKEIETRVYETLKICGLYEFRNWPISALSFGQ 433 Query: 406 QQKLALAMVMLLGPGILLLDEPTKGLDPGAKERLAALLGDLRRQGVSILLVTHDVEFAAR 465 ++++ +A +++LG I+LLDEPT G D + L +L ++G +I+++THD++ Sbjct: 434 KKRVTIASILVLGAEIILLDEPTAGQDQKNYTEIMEFLEELHQKGHTIVMITHDMQLMLD 493 Query: 466 YASRCAMLFDGGITSEGTPAEFFSS 490 Y+ R ++ DG + ++ PA S Sbjct: 494 YSDRVLVMVDGELIADTVPASLLSD 518 Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 66/247 (26%), Positives = 119/247 (48%), Gaps = 30/247 (12%) Query: 276 LLSCREVTFRYSKDGAEVLKKLSLSLYRGELLAVMGGNGAGKSTLLHILNGLLKPQRGKV 335 ++ ++ +FRY L+ + L++Y+GE + ++G +G+GKSTL LNG++ Sbjct: 5 IIEWKDFSFRYETQQEPTLQGIDLTIYKGEKVLIVGPSGSGKSTLGQCLNGIIP------ 58 Query: 336 TLAKGETSG-FLAQNPL-----LYFSYDTVQEELQQM-AEYAGLSK-------------- 374 + KG+T G FL + + +Y V LQ ++ GLS Sbjct: 59 NIYKGQTYGEFLIKGQVAFDMSIYDKSHLVSTVLQDTDGQFIGLSVAEDLAFALENDVTA 118 Query: 375 -EEADREIARLLAIFQLEDLLLSHPHDISGGQQQKLALAMVMLLGPGILLLDEPTKGLDP 433 +E + + L LL P D+SGGQ+Q+++LA V++ ILL DEP LDP Sbjct: 119 LDEMKGRVYKWAEKLDLLPLLDQRPQDLSGGQKQRVSLAGVLIDESPILLFDEPLANLDP 178 Query: 434 GAKERLAALLGDL-RRQGVSILLVTHDVE-FAARYASRCAMLFDGGITSEGTPAEFFSSN 491 + + + L+ + + +G + L++ H +E R R ++ DG I G+P + +++ Sbjct: 179 KSGQDIIELIDQIHKEEGTTTLIIEHRLEDVLHRPVDRIVLINDGRILFNGSPDQLLATD 238 Query: 492 YFYTTAV 498 + Sbjct: 239 LLTQNGI 245 >ZybhF [V] COG1131 ABC-type multidrug transport system, ATPase component Length = 583 Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 144/528 (27%), Positives = 242/528 (45%), Gaps = 61/528 (11%) Query: 2 LLGPSGGGKTTLLRHLKRELAPVGKAGGKIAYKGQPLSG--------LPAELAAAEIGMV 53 L+GP G GKTTL+R L L P + I + G +P + E V Sbjct: 43 LVGPDGAGKTTLMRMLAGLLKPDSGSATVIGFDPIKNDGALHAVLGYMPQKFGLYEDLTV 102 Query: 54 FQNPDAQIVMDTVWHELAFSMENMGYPPAVMRSRLAEIAGLFGLEPLLYKSVHELSGGQK 113 +N + + +V E + A + L P + +LSGG K Sbjct: 103 MENLNLYADLRSVTGE-------------ARKQTFARLLEFTSLGPFTGRLAGKLSGGMK 149 Query: 114 QLLNLASVLMLQPKLLLLDEPTSQLDPVAAREFLQTLHRLNEEMSVTVIISEHRLEEVLP 173 Q L LA L+ +PK+LLLDEP +DP++ RE Q +H L E + ++ S L+E Sbjct: 150 QKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELAGE-GMLILWSTSYLDEAEQ 208 Query: 174 LADRVLLLEEGELRFQGTPRDFVR---GAGLALHAPHMAY---------LP--------- 212 D VLL+ EGEL +QG P+ + G + +PH LP Sbjct: 209 CRD-VLLMNEGELLYQGEPKALTQTMAGRSFLMTSPHEGNRKLLQRALKLPQVSDGMIQG 267 Query: 213 TAARLFLALE--PDAVQAPREAIPLTVREGK-RWLHSLAERGPGMGEAAADTGASRLSAP 269 + RL L E PD ++ + + E R+ + + G G + + GA + Sbjct: 268 KSVRLILKKEATPDDIRHADGMPEININETTPRFEDAFIDLLGGAGTSESPLGAILHTVE 327 Query: 270 VTSSDLLLSCREVTFRYSKDGAEVLKKLSLSLYRGELLAVMGGNGAGKSTLLHILNGLLK 329 T + ++ +E+T ++ A ++ ++ RGE+ ++G NGAGKST ++ GLL Sbjct: 328 GTPGETVIEAKELTKKFGDFAAT--DHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLV 385 Query: 330 PQRGKVTL-------AKGETS---GFLAQNPLLYFSYDTVQEELQQMAEYAGLSKEEADR 379 P G+ + + G+ G++AQ LY + TV++ L+ + GL + Sbjct: 386 PTSGQALVLGMDLKESSGKARQHLGYMAQKFSLYGNL-TVEQNLRFFSGVYGLRGRAQNE 444 Query: 380 EIARLLAIFQLEDLLLSHPHDISGGQQQKLALAMVMLLGPGILLLDEPTKGLDPGAKERL 439 +I+R+ F L+ + ++ G +Q+LALA ++ P IL LDEPT G+DP + Sbjct: 445 KISRMSEAFGLKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREF 504 Query: 440 AALLGDLRRQGVSILLVTHDVEFAARYASRCAMLFDGGITSEGTPAEF 487 + + +GV++++ TH ++ A Y R +++ G + + GTP + Sbjct: 505 WLHINSMVEKGVTVMVTTHFMD-EAEYCDRIGLVYRGKLIASGTPDDL 551 Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 13/258 (5%) Query: 273 SDLLLSCREVTFRYSKDGAEVLKKLSLSLYRGELLAVMGGNGAGKSTLLHILNGLLKPQR 332 +D +++ + R+ + L +++ G + ++G +GAGK+TL+ +L GLLKP Sbjct: 7 NDAVITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDS 66 Query: 333 GKVTL-------AKGETSGFLAQNPLLYFSYD--TVQEELQQMAEYAGLSKEEADREIAR 383 G T+ G L P + Y+ TV E L A+ ++ E + AR Sbjct: 67 GSATVIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFAR 126 Query: 384 LLAIFQLEDLLLSHPHDISGGQQQKLALAMVMLLGPGILLLDEPTKGLDPGAKERLAALL 443 LL L +SGG +QKL LA ++ P +LLLDEP G+DP ++ L ++ Sbjct: 127 LLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMV 186 Query: 444 GDLRRQGVSILLVTHDVEFAARYASRCAMLFDGGITSEGTP---AEFFSSNYFYTTAVNR 500 +L +G+ IL T ++ A ++ +G + +G P + + F T+ + Sbjct: 187 HELAGEGMLILWSTSYLD-EAEQCRDVLLMNEGELLYQGEPKALTQTMAGRSFLMTSPHE 245 Query: 501 MARELLPQALTIEDVMNA 518 R+LL +AL + V + Sbjct: 246 GNRKLLQRALKLPQVSDG 263 >ybhF [V] COG1131 ABC-type multidrug transport system, ATPase component Length = 583 Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 144/528 (27%), Positives = 242/528 (45%), Gaps = 61/528 (11%) Query: 2 LLGPSGGGKTTLLRHLKRELAPVGKAGGKIAYKGQPLSG--------LPAELAAAEIGMV 53 L+GP G GKTTL+R L L P + I + G +P + E V Sbjct: 43 LVGPDGAGKTTLMRMLAGLLKPDSGSATVIGFDPIKNDGALHAVLGYMPQKFGLYEDLTV 102 Query: 54 FQNPDAQIVMDTVWHELAFSMENMGYPPAVMRSRLAEIAGLFGLEPLLYKSVHELSGGQK 113 +N + + +V E + A + L P + +LSGG K Sbjct: 103 MENLNLYADLRSVTGE-------------ARKQTFARLLEFTSLGPFTGRLAGKLSGGMK 149 Query: 114 QLLNLASVLMLQPKLLLLDEPTSQLDPVAAREFLQTLHRLNEEMSVTVIISEHRLEEVLP 173 Q L LA L+ +PK+LLLDEP +DP++ RE Q +H L E + ++ S L+E Sbjct: 150 QKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELAGE-GMLILWSTSYLDEAEQ 208 Query: 174 LADRVLLLEEGELRFQGTPRDFVR---GAGLALHAPHMAY---------LP--------- 212 D VLL+ EGEL +QG P+ + G + +PH LP Sbjct: 209 CRD-VLLMNEGELLYQGEPKALTQTMAGRSFLMTSPHEGNRKLLQRALKLPQVSDGMIQG 267 Query: 213 TAARLFLALE--PDAVQAPREAIPLTVREGK-RWLHSLAERGPGMGEAAADTGASRLSAP 269 + RL L E PD ++ + + E R+ + + G G + + GA + Sbjct: 268 KSVRLILKKEATPDDIRHADGMPEININETTPRFEDAFIDLLGGAGTSESPLGAILHTVE 327 Query: 270 VTSSDLLLSCREVTFRYSKDGAEVLKKLSLSLYRGELLAVMGGNGAGKSTLLHILNGLLK 329 T + ++ +E+T ++ A ++ ++ RGE+ ++G NGAGKST ++ GLL Sbjct: 328 GTPGETVIEAKELTKKFGDFAAT--DHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLV 385 Query: 330 PQRGKVTL-------AKGETS---GFLAQNPLLYFSYDTVQEELQQMAEYAGLSKEEADR 379 P G+ + + G+ G++AQ LY + TV++ L+ + GL + Sbjct: 386 PTSGQALVLGMDLKESSGKARQHLGYMAQKFSLYGNL-TVEQNLRFFSGVYGLRGRAQNE 444 Query: 380 EIARLLAIFQLEDLLLSHPHDISGGQQQKLALAMVMLLGPGILLLDEPTKGLDPGAKERL 439 +I+R+ F L+ + ++ G +Q+LALA ++ P IL LDEPT G+DP + Sbjct: 445 KISRMSEAFGLKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREF 504 Query: 440 AALLGDLRRQGVSILLVTHDVEFAARYASRCAMLFDGGITSEGTPAEF 487 + + +GV++++ TH ++ A Y R +++ G + + GTP + Sbjct: 505 WLHINSMVEKGVTVMVTTHFMD-EAEYCDRIGLVYRGKLIASGTPDDL 551 Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 13/258 (5%) Query: 273 SDLLLSCREVTFRYSKDGAEVLKKLSLSLYRGELLAVMGGNGAGKSTLLHILNGLLKPQR 332 +D +++ + R+ + L +++ G + ++G +GAGK+TL+ +L GLLKP Sbjct: 7 NDAVITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDS 66 Query: 333 GKVTL-------AKGETSGFLAQNPLLYFSYD--TVQEELQQMAEYAGLSKEEADREIAR 383 G T+ G L P + Y+ TV E L A+ ++ E + AR Sbjct: 67 GSATVIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFAR 126 Query: 384 LLAIFQLEDLLLSHPHDISGGQQQKLALAMVMLLGPGILLLDEPTKGLDPGAKERLAALL 443 LL L +SGG +QKL LA ++ P +LLLDEP G+DP ++ L ++ Sbjct: 127 LLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMV 186 Query: 444 GDLRRQGVSILLVTHDVEFAARYASRCAMLFDGGITSEGTP---AEFFSSNYFYTTAVNR 500 +L +G+ IL T ++ A ++ +G + +G P + + F T+ + Sbjct: 187 HELAGEGMLILWSTSYLD-EAEQCRDVLLMNEGELLYQGEPKALTQTMAGRSFLMTSPHE 245 Query: 501 MARELLPQALTIEDVMNA 518 R+LL +AL + V + Sbjct: 246 GNRKLLQRALKLPQVSDG 263 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.319 0.136 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 39,314,665 Number of extensions: 1698704 Number of successful extensions: 26345 Number of sequences better than 1.0e-05: 2221 Number of HSP's gapped: 20932 Number of HSP's successfully gapped: 4583 Length of query: 526 Length of database: 38,378,431 Length adjustment: 111 Effective length of query: 415 Effective length of database: 25,576,357 Effective search space: 10614188155 Effective search space used: 10614188155 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 118 (50.1 bits)