BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0555.0010.p (922 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BH0648 [L] COG0210 Superfamily I DNA and RNA helicases 832 0.0 BS_yerF [L] COG0210 Superfamily I DNA and RNA helicases 825 0.0 SA1721 [L] COG0210 Superfamily I DNA and RNA helicases 761 0.0 CAC2674 [L] COG0210 Superfamily I DNA and RNA helicases 654 0.0 ML0287 [S] COG0586 Uncharacterized membrane-associated protein 645 0.0 >BH0648 [L] COG0210 Superfamily I DNA and RNA helicases Length = 747 Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/639 (65%), Positives = 517/639 (80%), Gaps = 3/639 (0%) Query: 6 IQDAVSRLNPPQRQAVETTEGPLLIMAGAGSGKTRVLTHRIAWLIANRKAPPWAILAITF 65 I+ ++ LN QR+AV+ TEGPLL+MAGAGSGKTRVLTHRIA+L+ + PW +LAITF Sbjct: 13 IEKMLAGLNDRQREAVKHTEGPLLLMAGAGSGKTRVLTHRIAYLLREKGVAPWNVLAITF 72 Query: 66 TNKAAREMQDRVSKLVGPEGRDIWVSTFHSMSVRILRKDIERIGFTSNFSILDSTDQLSV 125 TNKAAREM+DRV++LVGP DIW+STFHSM VRILR+DI+RIG++ NF+ILDSTDQLSV Sbjct: 73 TNKAAREMKDRVAQLVGPIADDIWISTFHSMCVRILRRDIDRIGYSRNFTILDSTDQLSV 132 Query: 126 IRNCMKDLNIDTKKFEPKAVQAMISAAKNELITPAQYEQKIGDYLEGLVAKVYTMYQKRL 185 I+ +K+ NID+KKFEP+++ IS AKNEL TP Q+ E A+VY YQK+L Sbjct: 133 IKQILKNNNIDSKKFEPRSILGTISGAKNELKTPEQFMGIAKGPYEETAAEVYVEYQKQL 192 Query: 186 KSNNSLDFDDLIMKTIELFKEVPEVLDFYQKKFKYIHVDEYQDTNRAQYMLCRMLADSHH 245 K N +LDFDDLIMKT LFK+VPEVL++YQ+KF+YI VDEYQDTNRAQYML +ML D H Sbjct: 193 KKNQALDFDDLIMKTTSLFKKVPEVLEYYQRKFQYILVDEYQDTNRAQYMLVKMLGDRHK 252 Query: 246 RICVVGDSDQSIYRWRGADITNILNFEEDYPEAKTILLEQNYRSTSNILNAANGVIALNT 305 +CVVGDSDQSIY+WRGADI NIL+FEEDY +A+ ILLEQNYRST IL AAN VI N Sbjct: 253 NVCVVGDSDQSIYKWRGADIANILSFEEDYQDAEVILLEQNYRSTKTILEAANRVIENNV 312 Query: 306 GRKPKKLWTDSAEGAKIKVFRGDSEHDEGYFVTGEISKNVQQGQSYQNHAILYRTNAQSR 365 RKPK LWT++ +GAKI ++ D+E E FV +I + +Q G SY++ AILYRTNAQSR Sbjct: 313 KRKPKNLWTENEQGAKIGFYKADTEQGEAQFVVEKIREAIQDGASYKDIAILYRTNAQSR 372 Query: 366 VIEEILIKSDIPYQIVGGIKFYDRKEIKDLLAYLRLLSNPDDDISLTRIINVPKRGLGDT 425 V+EE+LIKS+I Y IVGG KFYDRKEIKD+LAYLRL++NPDDDISL RIINVPKRG+G T Sbjct: 373 VMEEMLIKSNIDYNIVGGTKFYDRKEIKDVLAYLRLVANPDDDISLQRIINVPKRGIGAT 432 Query: 426 TVGKLAAAAASQGVSIFRALQTVDDLGFAGRTRNTLVEFYDMIEALHRMVEFLSVTELTE 485 TV K+AA A QG+S+F AL+ ++ +G R + LVEF + + +M E+LSVTEL E Sbjct: 433 TVDKIAAYAERQGISMFAALKEIEQIGVTSRAVSKLVEFTEQLGHWVQMQEYLSVTELVE 492 Query: 486 KILELSQYRLELQNENTLESRSRLENIDEFLSVTMEFEKNNEDKSLVSFLTDLALIA--- 542 ++LE + YR LQNE TLE++SRLENIDEFLSVT EFEK+++DKSL++FLTDLALI+ Sbjct: 493 ELLERTGYRDMLQNEKTLEAQSRLENIDEFLSVTQEFEKSSDDKSLIAFLTDLALISDID 552 Query: 543 DIDSVNDDEERSDAVVLMTMHSAKGLEFPTVFIIGMEEGVFPHSRAFQDNDELEEERRLA 602 +D +D + +DAVVLMT+HSAKGLEFP VF+IG+EEG+FPHSR+ ++DE+EEERRLA Sbjct: 553 KLDDEDDGAKPTDAVVLMTLHSAKGLEFPIVFLIGLEEGIFPHSRSLFEDDEMEEERRLA 612 Query: 603 YVGITRAEKQLFLSCARMRTLFGRTTANPPSRFLDEIPE 641 YVGITRAEKQL+L+ A++RT++GRT ANPPSRF+DEIPE Sbjct: 613 YVGITRAEKQLYLTSAQLRTIYGRTNANPPSRFIDEIPE 651 >BS_yerF [L] COG0210 Superfamily I DNA and RNA helicases Length = 739 Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/636 (63%), Positives = 506/636 (79%), Gaps = 4/636 (0%) Query: 10 VSRLNPPQRQAVETTEGPLLIMAGAGSGKTRVLTHRIAWLIANRKAPPWAILAITFTNKA 69 +S LNP Q++AV+TT+GPLL+MAGAGSGKTRVLTHRIA+L+A + PW ILAITFTNKA Sbjct: 9 LSGLNPVQQEAVKTTDGPLLLMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKA 68 Query: 70 AREMQDRVSKLVGPEGRDIWVSTFHSMSVRILRKDIERIGFTSNFSILDSTDQLSVIRNC 129 AREM++RV ++GP DIW+STFHSM VRILR+DI+RIG NFSILD+ DQLSVI+ Sbjct: 69 AREMKERVESILGPGADDIWISTFHSMCVRILRRDIDRIGINRNFSILDTADQLSVIKGI 128 Query: 130 MKDLNIDTKKFEPKAVQAMISAAKNELITPAQYEQKIGDYLEGLVAKVYTMYQKRLKSNN 189 +K+ N+D KKF+P+++ IS+AKNEL P ++ + G Y + +V+ VY YQK+L N Sbjct: 129 LKERNLDPKKFDPRSILGTISSAKNELTEPEEFSKVAGGYYDQVVSDVYADYQKKLLKNQ 188 Query: 190 SLDFDDLIMKTIELFKEVPEVLDFYQKKFKYIHVDEYQDTNRAQYMLCRMLADSHHRICV 249 SLDFDDLIM TI+LF VPEVL+FYQ+KF+YIHVDEYQDTNRAQYML + LA+ +CV Sbjct: 189 SLDFDDLIMTTIKLFDRVPEVLEFYQRKFQYIHVDEYQDTNRAQYMLVKQLAERFQNLCV 248 Query: 250 VGDSDQSIYRWRGADITNILNFEEDYPEAKTILLEQNYRSTSNILNAANGVIALNTGRKP 309 VGDSDQSIYRWRGADITNIL+FE+DYP A ILLEQNYRST IL AAN VI N+ RKP Sbjct: 249 VGDSDQSIYRWRGADITNILSFEKDYPNASVILLEQNYRSTKRILRAANEVIKNNSNRKP 308 Query: 310 KKLWTDSAEGAKIKVFRGDSEHDEGYFVTGEISKNVQQGQ-SYQNHAILYRTNAQSRVIE 368 K LWT++ EG KI +RGD+E EG FV G+I + G+ + AILYRTNAQSRVIE Sbjct: 309 KNLWTENDEGIKISYYRGDNEFGEGQFVAGKIHQLHSTGKRKLSDIAILYRTNAQSRVIE 368 Query: 369 EILIKSDIPYQIVGGIKFYDRKEIKDLLAYLRLLSNPDDDISLTRIINVPKRGLGDTTVG 428 E L+K+ + Y IVGG KFYDRKEIKD+LAYLRL+SNPDDDIS TRI+NVPKRG+G T++ Sbjct: 369 ETLLKAGLNYNIVGGTKFYDRKEIKDILAYLRLVSNPDDDISFTRIVNVPKRGVGATSLE 428 Query: 429 KLAAAAASQGVSIFRALQTVDDLGFAGRTRNTLVEFYDMIEALHRMVEFLSVTELTEKIL 488 K+A+ AA G+S F+A+Q VD +G + + N L F MIE L M ++LS+TELTE+IL Sbjct: 429 KIASYAAINGLSFFQAIQQVDFIGVSAKAANALDSFRQMIENLTNMQDYLSITELTEEIL 488 Query: 489 ELSQYRLELQNENTLESRSRLENIDEFLSVTMEFEKNNEDKSLVSFLTDLALIADIDSVN 548 + ++YR L+ E ++E++SRLENIDEFLSVT FE+ +EDK+LV+FLTDLALIADID ++ Sbjct: 489 DKTEYREMLKAEKSIEAQSRLENIDEFLSVTKNFEQKSEDKTLVAFLTDLALIADIDQLD 548 Query: 549 DDEERS---DAVVLMTMHSAKGLEFPTVFIIGMEEGVFPHSRAFQDNDELEEERRLAYVG 605 EE S DA+ LMT+H+AKGLEFP VF++G+EEGVFPHSR+ + E+EEERRLAYVG Sbjct: 549 QKEEESGGKDAITLMTLHAAKGLEFPVVFLMGLEEGVFPHSRSLMEEAEMEEERRLAYVG 608 Query: 606 ITRAEKQLFLSCARMRTLFGRTTANPPSRFLDEIPE 641 ITRAE++L+L+ A+MRTLFGRT NP SRF+ EIP+ Sbjct: 609 ITRAEQELYLTNAKMRTLFGRTNMNPESRFIAEIPD 644 >SA1721 [L] COG0210 Superfamily I DNA and RNA helicases Length = 730 Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/636 (58%), Positives = 480/636 (75%), Gaps = 8/636 (1%) Query: 10 VSRLNPPQRQAVETTEGPLLIMAGAGSGKTRVLTHRIAWLIANRKAPPWAILAITFTNKA 69 ++ +N Q +AV+TTEGPLLIMAGAGSGKTRVLTHRIA+L+ + P+ +LAITFTNKA Sbjct: 5 LNHMNTEQSEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNVLAITFTNKA 64 Query: 70 AREMQDRVSKLVGPEGRDIWVSTFHSMSVRILRKDIERIGFTSNFSILDSTDQLSVIRNC 129 AREM++RV KLVG + IW+STFHSM VRILR+D +RIG NF+I+D TDQ SVI++ Sbjct: 65 AREMKERVQKLVGDQAEVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSVIKDV 124 Query: 130 MKDLNIDTKKFEPKAVQAMISAAKNELITPAQYEQKIGDYLEGLVAKVYTMYQKRLKSNN 189 +K+ NID+KKFEP+ IS KNEL TPA +++ DY +VA VY+ YQ++L N Sbjct: 125 LKNENIDSKKFEPRMFIGAISNLKNELKTPADAQKEATDYHSQMVATVYSGYQRQLSRNE 184 Query: 190 SLDFDDLIMKTIELFKEVPEVLDFYQKKFKYIHVDEYQDTNRAQYMLCRMLADSHHRICV 249 +LDFDDLIM TI LF+ VPEVL++YQ KF+YIHVDEYQDTN+AQY L ++LA +CV Sbjct: 185 ALDFDDLIMTTINLFERVPEVLEYYQNKFQYIHVDEYQDTNKAQYTLVKLLASKFKNLCV 244 Query: 250 VGDSDQSIYRWRGADITNILNFEEDYPEAKTILLEQNYRSTSNILNAANGVIALNTGRKP 309 VGDSDQSIY WRGADI NIL+FE+DYPEA TI LEQNYRST ILNAAN VI N+ RKP Sbjct: 245 VGDSDQSIYGWRGADIQNILSFEKDYPEANTIFLEQNYRSTKTILNAANEVIKNNSERKP 304 Query: 310 KKLWTDSAEGAKIKVFRGDSEHDEGYFVTGEISKNVQQGQSYQNHAILYRTNAQSRVIEE 369 K LWT + G KI + +E DE FV EI K+ + G+ YQ+ AILYRTNAQSRV+EE Sbjct: 305 KGLWTANTNGEKIHYYEAMTERDEAEFVIREIMKHQRNGKKYQDMAILYRTNAQSRVLEE 364 Query: 370 ILIKSDIPYQIVGGIKFYDRKEIKDLLAYLRLLSNPDDDISLTRIINVPKRGLGDTTVGK 429 +KS++PY +VGG KFYDRKEIKDLL+YLR+++N +DDISL RIINVPKRG+G ++V K Sbjct: 365 TFMKSNMPYTMVGGQKFYDRKEIKDLLSYLRIIANSNDDISLQRIINVPKRGVGPSSVEK 424 Query: 430 LAAAAASQGVSIFRALQTVDDLGFAGRTRNTLVEFYDMIEALHRMVEFLSVTELTEKILE 489 + A +S+F AL D +G + + + FY++I++L + EFL + E+ +++L+ Sbjct: 425 VQNYALQNNISMFDALGEADFIGLSKKVTQECLNFYELIQSLIKEQEFLEIHEIVDEVLQ 484 Query: 490 LSQYRLELQNENTLESRSRLENIDEFLSVTMEFEKNN--EDKSLVSFLTDLALIADIDSV 547 S YR L+ ENTLESRSRLENIDEF+SV ++E+N E++SL++FLTDL+L+ADID Sbjct: 485 KSGYREMLERENTLESRSRLENIDEFMSVPKDYEENTPLEEQSLINFLTDLSLVADIDEA 544 Query: 548 NDDEERSDAVVLMTMHSAKGLEFPTVFIIGMEEGVFPHSRAF--QDNDELEEERRLAYVG 605 + + + V LMTMHSAKGLEFP VFI+GMEE +FPH RA +D+ E++EERR+ YV Sbjct: 545 DTE----NGVTLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKSEDDHEMQEERRICYVA 600 Query: 606 ITRAEKQLFLSCARMRTLFGRTTANPPSRFLDEIPE 641 ITRAE+ L+++ A R LFGR +N PSRFL EIPE Sbjct: 601 ITRAEEVLYITHATSRMLFGRPQSNMPSRFLKEIPE 636 >CAC2674 [L] COG0210 Superfamily I DNA and RNA helicases Length = 756 Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/633 (51%), Positives = 461/633 (72%), Gaps = 7/633 (1%) Query: 13 LNPPQRQAVETTEGPLLIMAGAGSGKTRVLTHRIAWLIANRKAPPWAILAITFTNKAARE 72 LN Q +A +GP+LI+AGAGSGKTRVLT+RIA ++ + + P ILAITFTNKAA+E Sbjct: 7 LNEEQYKAATKIDGPILILAGAGSGKTRVLTYRIAHMVKDLEIYPSQILAITFTNKAAKE 66 Query: 73 MQDRVSKLVGP-EGRDIWVSTFHSMSVRILRKDIERIGFTSNFSILDSTDQLSVIRNCMK 131 M+DRV L+G E ++W+STFHS VRILR++I++IG+ NF+I DS DQ ++R C+K Sbjct: 67 MKDRVKALIGGNEIDNMWISTFHSCCVRILRREIDKIGYNKNFTIYDSDDQKVLMRECIK 126 Query: 132 DLNIDTKKFEPKAVQAMISAAKNELITPAQYE-QKIGDYLEGLVAKVYTMYQKRLKSNNS 190 + I+ K K + + I +AK+ L++ QY+ Q G++ +A VY +YQK+LK NN+ Sbjct: 127 QVGINEKDITEKEIISKIGSAKDGLVSANQYKNQNSGNFKLNKIADVYLLYQKKLKENNA 186 Query: 191 LDFDDLIMKTIELFKEVPEVLDFYQKKFKYIHVDEYQDTNRAQYMLCRMLADSHHRICVV 250 LDFDDLI KT+ELFK+ P+VL FYQ+KF+YI +DEYQDTN++QY R+LA ++ +CVV Sbjct: 187 LDFDDLIFKTVELFKKAPDVLAFYQRKFRYIMIDEYQDTNKSQYEFARLLASANKNLCVV 246 Query: 251 GDSDQSIYRWRGADITNILNFEEDYPEAKTILLEQNYRSTSNILNAANGVIALNTGRKPK 310 GD DQ IY WRGADI NILNFE+DY A I LE+NYRS NIL AANGVI N K Sbjct: 247 GDDDQCIYGWRGADIRNILNFEKDYRNAVIIKLEENYRSKGNILKAANGVIKNNPHEHLK 306 Query: 311 KLWTDSAEGAKIKVFRGDSEHDEGYFVTGEISKNV-QQGQSYQNHAILYRTNAQSRVIEE 369 L T S +GAKIKV+RG+++ DE F +I+K V ++ +S+++ AILYRTNAQSRV E+ Sbjct: 307 SLRTRSEDGAKIKVYRGETDLDEASFAAFKINKEVKEEKRSFKDFAILYRTNAQSRVFED 366 Query: 370 ILIKSDIPYQIVGGIKFYDRKEIKDLLAYLRLLSNPDDDISLTRIINVPKRGLGDTTVGK 429 I IK +IPY+I+GG+KFYDRKEIKD+++YL+L+ NP D+ISL RIINVPKR +G TT+G+ Sbjct: 367 IFIKRNIPYRIIGGLKFYDRKEIKDIMSYLKLIGNPLDNISLKRIINVPKRSIGQTTLGR 426 Query: 430 LAAAAASQGVSIFRALQTVDDL-GFAGRTRNTLVEFYDMIEALHRMVEFLSVTELTEKIL 488 L A ++ AL ++++ G R +++ EF MI + R + ++V+ L ++IL Sbjct: 427 LQQFADEVEECLYDALLDIENIPGIPKRAISSIKEFTGMINSFIRRKDEINVSVLIKEIL 486 Query: 489 ELSQYRLELQNENTLESRSRLENIDEFLSVTMEFEKNNEDKSLVSFLTDLALIADIDSVN 548 E + Y EL+ + ++ ++R+ENI+E ++ ++FE+N++DK+L +FL AL+AD+D+ N Sbjct: 487 EQTGYLNELKASDDIQDKARIENIEELVNAAVDFEENSDDKTLAAFLEKTALVADVDNYN 546 Query: 549 DDEERSDAVVLMTMHSAKGLEFPTVFIIGMEEGVFPHSRAFQDNDELEEERRLAYVGITR 608 +D +D VV+MT+HSAKGLEFP VF+ GME G+FP +F E+EE RRLAYVGITR Sbjct: 547 ED---ADTVVMMTVHSAKGLEFPVVFMAGMENGIFPGMASFNSEYEMEESRRLAYVGITR 603 Query: 609 AEKQLFLSCARMRTLFGRTTANPPSRFLDEIPE 641 A+++L+++ A++R +FG+T A S F++EI E Sbjct: 604 AKEKLYMTSAKLRRVFGKTQAFEESDFINEIDE 636 >ML0287 [S] COG0586 Uncharacterized membrane-associated protein Length = 758 Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/645 (51%), Positives = 447/645 (69%), Gaps = 23/645 (3%) Query: 13 LNPPQRQAVETTEGPLLIMAGAGSGKTRVLTHRIAWLIANRKAPPWAILAITFTNKAARE 72 +N Q +AV+TTEGPLLIMAGAGSGKTRVLTHRIA+LI + PW ILAITFTNKAA+E Sbjct: 8 MNEKQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKMVNPWNILAITFTNKAAKE 67 Query: 73 MQDRVSKLVGPEGRDIWVSTFHSMSVRILRKDIERIGFTSNFSILDSTDQLSVIRNCMKD 132 M++R L P +D ++TFHSM VRILR+D + IG+ NF+I+D DQ S+++ +K+ Sbjct: 68 MRERALSLT-PRAQDTLIATFHSMCVRILRRDADHIGYNRNFTIIDPGDQKSLMKRILKE 126 Query: 133 LNIDTKKFEPKAVQAMISAAKNELITPAQYEQKIGDY--LEGLVAKVYTMYQKRLKSNNS 190 N+D KK+EPK + IS AKN+L+ + YE + E +VA+VY +YQK L+ S Sbjct: 127 ANLDPKKWEPKGLLNAISNAKNDLLDESAYEAQTSARHPYEMVVARVYKIYQKELRKAES 186 Query: 191 LDFDDLIMKTIELFKEVPEVLDFYQKKFKYIHVDEYQDTNRAQYMLCRMLADSHHRICVV 250 +DFDDLIM+T+ LF E P+VL +YQ KF+YIHVDEYQDTN AQY L ++LA ICVV Sbjct: 187 MDFDDLIMQTLRLFDENPDVLSYYQGKFQYIHVDEYQDTNHAQYQLVKLLASRFQNICVV 246 Query: 251 GDSDQSIYRWRGADITNILNFEEDYPEAKTILLEQNYRSTSNILNAANGVIALNTGRKPK 310 GD+DQSIY WRGAD+ NIL+FE+DYP+AK +LLE+NYRST IL+AAN VI N R+PK Sbjct: 247 GDADQSIYGWRGADMQNILDFEKDYPKAKVVLLEENYRSTKTILDAANNVIKNNLKRRPK 306 Query: 311 KLWTDSAEGAKIKVFRGDSEHDEGYFVTGEISKNVQQGQSYQNHAILYRTNAQSRVIEEI 370 +LWT + G KI FR +E +E V+ I+ ++ G+SY ++A+LYRTNAQSR IE+ Sbjct: 307 ELWTQNDAGDKIVYFRAGNEQEEANKVSEIITSGIRSGRSYADYAVLYRTNAQSRTIEDS 366 Query: 371 LIKSDIPYQIVGGIKFYDRKEIKDLLAYLRLLSNPDDDISLTRIINVPKRGLGDTTVGKL 430 +KS+IPY +V G KFY RKEI+D++AYL +++NP D++S RI+N PKRG+G + KL Sbjct: 367 FVKSNIPYTMVAGTKFYSRKEIRDVIAYLNVVANPADNMSFERIVNEPKRGVGPGALEKL 426 Query: 431 AAAAASQGVSIFRALQTVDDLGFAGRTRNTLVEFYDMIEALHRMVEFLSVTELTEKILEL 490 A S+G+S+ + + G+ + + L E ++TEL E++LE Sbjct: 427 RRFADSRGLSLADSSFDIMLSDIRGKAAGEIYNLAMAFDLLRTHSESSTITELVEEMLER 486 Query: 491 SQYRLELQNENTLESRSRLENIDEFLSVTMEFEKNNE----------------DKSLVSF 534 + Y LQ ++E+++R+ENI+EFLSVT F++ +E DK L F Sbjct: 487 TGYVKALQMMPSIENQARIENIEEFLSVTKGFDEKSEIPLDEETGEPIVETGLDK-LSRF 545 Query: 535 LTDLALIADIDSVNDDEERSDAVVLMTMHSAKGLEFPTVFIIGMEEGVFPHSRAFQDNDE 594 L +++L+++ D+ EE SD V +MT+H+AKGLEFP VF+IGMEE +FP SR +D DE Sbjct: 546 LNEVSLLSETDAY---EEESDQVTMMTLHAAKGLEFPIVFLIGMEENIFPLSRVNEDIDE 602 Query: 595 LEEERRLAYVGITRAEKQLFLSCARMRTLFGRTTANPPSRFLDEI 639 LEEERRLAYVGITRAE+ L+L A R L+G+T N PSRF+ EI Sbjct: 603 LEEERRLAYVGITRAEETLYLMNANQRVLYGKTNYNRPSRFISEI 647 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.320 0.135 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 58,792,270 Number of extensions: 2286571 Number of successful extensions: 15405 Number of sequences better than 1.0e-05: 1769 Number of HSP's gapped: 6794 Number of HSP's successfully gapped: 1796 Length of query: 922 Length of database: 38,378,431 Length adjustment: 116 Effective length of query: 806 Effective length of database: 24,999,687 Effective search space: 20149747722 Effective search space used: 20149747722 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 121 (51.2 bits)