BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0555.0005.p (330 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CAC2321 [R] COG1216 Predicted glycosyltransferases 229 4e-60 CAC2320 [R] COG1216 Predicted glycosyltransferases 171 1e-42 alr4493 [R] COG1216 Predicted glycosyltransferases 157 2e-38 CC0465 [R] COG1216 Predicted glycosyltransferases 114 2e-25 CAC2172 [R] COG1216 Predicted glycosyltransferases 104 2e-22 >CAC2321 [R] COG1216 Predicted glycosyltransferases Length = 298 Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 110/281 (39%), Positives = 174/281 (61%), Gaps = 5/281 (1%) Query: 23 LNYNTCRLTMDCLRSVYDSETNFVYEIILIDNNSRDDSVERISREFPG---VMLIANSEN 79 LNYN R +C+ S+Y++ +E+IL+DN S D+S E I +F G I + N Sbjct: 11 LNYNAKRFLEECINSIYENTKEIKFEVILVDNKSTDNSAEFIKEKFTGKEDFTFIESKVN 70 Query: 80 VGYARANNQGMEVASGRYVLLLNSDTVVLKDTLQTMISFMDGRPDLGASGCKVILPDGSL 139 G+A NN+ +EV+ GR VLLLN DTVV + + + +G +GCKV+ PDG+L Sbjct: 71 CGFAAGNNKAIEVSKGRAVLLLNPDTVVNGNVIGETYKCLMKDDKVGVAGCKVLNPDGTL 130 Query: 140 DKACKRGFPTPSASFYYAFGFSKLFPDRPRFNGYQLGYLDPDQDYPVDCLVGAFMLLRRE 199 AC+R PTP +FY FG SK+F + +F Y L Y D+ VD + G+++++++E Sbjct: 131 QLACRRMIPTPKDAFYKIFGLSKIFKNNKKFTRYNLTYASADEFIDVDSVSGSYLMIKKE 190 Query: 200 TIEQVGGLDEDFFMYGEDLDWCFRIKEAGWGIYYYPQTSIIHLKGGSARRRPFKIVYEFH 259 I+++G LDE FFMYGE++DWC R ++AG+ + Y P +IIH KG S+++ K YEF+ Sbjct: 191 VIDKIGYLDETFFMYGEEMDWCLRARKAGYIVRYCPVGTIIHYKGESSKQLSHKATYEFY 250 Query: 260 RAMILFHRKHYSKRYNSMINGAVYAGVGVKFALSLVRNALI 300 RAM +F++K+ + N ++ V+ GV ++L++ A++ Sbjct: 251 RAMWIFYKKN--NKGNIFLDSIVWLGVKFLLFIALIKLAIL 289 >CAC2320 [R] COG1216 Predicted glycosyltransferases Length = 254 Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 90/241 (37%), Positives = 137/241 (56%), Gaps = 16/241 (6%) Query: 24 NYNTCRLTMDCLRSVYDSETNFVYEIILIDNNSRDDSVERISREFPGVMLIANSENVGYA 83 NYNT +CL S+ + N YE+I+ DNNS+DDSV I EFP V LI + N G+A Sbjct: 12 NYNTEEFLRNCLNSIKSTVKNVKYEVIVTDNNSKDDSVTMIKNEFPWVKLIESKINGGFA 71 Query: 84 RANNQGMEVASGRYVLLLNSDTVVLKDTLQTMISFMDGRPDLGASGCKVILPDGSLDKAC 143 ANN ++ +SG+Y+ LLN+DTV+LKD ++ M+++MD D+G G K++ D S + Sbjct: 72 YANNLAIKESSGKYIFLLNTDTVLLKDVIEKMVNYMDENKDVGLLGPKLLNRDMS-HQTS 130 Query: 144 KRGFPTPSASFYYAFGFSKLF--PDRPRF-------------NGYQLGYLDPDQDYPVDC 188 GFP+ FY+ + + P + Y + + D+ V Sbjct: 131 VSGFPSFKREFYHIYKLKNILKIPILKKIIVAMSGKIGSKDVEQYMMNFKSIDEPREVQV 190 Query: 189 LVGAFMLLRRETIEQVGGLDEDFFMYGEDLDWCFRIKEAGWGIYYYPQTSIIHLKGGSAR 248 LVGA +L+RR I+++G LDE +FMY E++D+C++ +AG+ YYP IIH G +A Sbjct: 191 LVGAALLVRRNVIDKIGMLDERYFMYYEEIDFCYQANKAGFKAVYYPNGEIIHYIGQAAT 250 Query: 249 R 249 + Sbjct: 251 K 251 >alr4493 [R] COG1216 Predicted glycosyltransferases Length = 359 Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 14/254 (5%), Positives = 40/254 (15%), Gaps = 19/254 (7%) Query: 23 LNYNTCRLTMDCLRSVYDSETNFVYEIILIDNNSRDDSVERISREFPGVMLIANSENVGY 82 + + + Y L++ + L + + Sbjct: 14 RHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEALRLRAGGITK 73 Query: 83 ARANNQGMEVASGRYVLLLNSDTVVLKDTLQTMISFMDGRPDLGASGCKVILPDGSLDKA 142 +G A + + + Q + K+ Sbjct: 74 PVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWMKLDTGM------ 127 Query: 143 CKRGFPTPSASFYYAFGFSKLFPDRPRFNGY-----QLGYLDPDQDY--PVDCLVGAFML 195 A F + + L Sbjct: 128 -----HRLGVRPEQAEAFYHRLTQC-KNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181 Query: 196 LRRETIEQVGGLDEDFFMYGEDLDWCFRIKEAGWGIYYYPQTSIIHLKGGSARRRPFKIV 255 + ++ ++ + R +G+ S G + Sbjct: 182 CEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSSL 241 Query: 256 YEFHRAMILFHRKH 269 + Sbjct: 242 IAVREHKAGEPVGY 255 >CC0465 [R] COG1216 Predicted glycosyltransferases Length = 308 Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/259 (28%), Positives = 131/259 (50%), Gaps = 16/259 (6%) Query: 25 YNTCRLTMDCLRSVYDSETNFVYEIILIDN--NSRDDSVER-ISREFPGVMLIANSENVG 81 Y T ++ +R V V E I++DN +SRD+ + R ++ P V+L NVG Sbjct: 29 YRTGEALVESIRHVLAEP--LVDEFIIVDNGSSSRDEDMLRSLALTEPRVVLKQGHGNVG 86 Query: 82 YARANNQGMEVASGRYVLLLNSDTVVLKDTLQTMISFMDGRPDLGASGCKVILPDGSLDK 141 +AR N G A G Y++ LN D + + ++++ G+P G +V+ DGS + Sbjct: 87 FARGANLGAVTAGGEYIVFLNPDANLQPSCVASLVTAFKGQPVPTIVGARVLNTDGSEQR 146 Query: 142 ACKRGFPTPSASFYYAFGFSKLFPDRPRFNGYQLGYLD---PDQDYPVDCLVGAFMLLRR 198 +RG TP ++ F +L P+ G+++ + P P+ + GA +RR Sbjct: 147 GGRRGDVTPIST---VLSFGQLTRRYPKLAGFEIHRENEPLPGAPVPMPTISGACFAMRR 203 Query: 199 ETIEQVGGLDEDFFMYGEDLDWCFRIKEAGWGIYYYPQTSIIHLKGGSARRRPFKIVYEF 258 + G DE +F++ ED+D C+R + AG + + P ++HL G ++ P K+ EF Sbjct: 204 ADFVALNGFDEGYFLHVEDIDLCWRARRAGGQVLFQPNAEVVHL-GHTSLEHPVKV--EF 260 Query: 259 HRAMILFHRKHYSKRYNSM 277 H+ + L +++ KR +S+ Sbjct: 261 HKGVGL--TRYFIKRADSL 277 >CAC2172 [R] COG1216 Predicted glycosyltransferases Length = 449 Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 74/250 (29%), Positives = 128/250 (51%), Gaps = 18/250 (7%) Query: 24 NYNTCRLTMDCLRSVYDSETNFVYEIILIDNNSRDDSVERISREFPG-VMLIANSENVGY 82 NYN ++C+ SV +S + +I ++DN S D SVE I +F VMLI+N+EN+G Sbjct: 10 NYNKKEYVLNCIDSVLNSSYRDL-DIYVVDNASEDGSVEAIKDKFKDKVMLISNTENLGG 68 Query: 83 ARANNQGM-EVASG--RYVLLLNSDTVVLKDTLQTMISFMDGRPDLGASGCKVILPDGSL 139 + N G+ EV +YV+LL++D ++ K+ + +++ D G K+ D Sbjct: 69 SGGFNTGIREVLKKDYKYVMLLDNDVILDKEAINNSYRYLEKNDDTAVVGSKIYSMDNR- 127 Query: 140 DKACKRGFPTPSASFYYAFGFSKLFPDRPRFNGYQLGYLDPDQDYPVDCLVGAFMLLRRE 199 DK + G +FY P + GY + +++ + D + M++R E Sbjct: 128 DKIQEMGAKIDFENFYI----------NPFYKGY-IDFIELPEVVECDYVPACSMMVRIE 176 Query: 200 TIEQVGGLDEDFFMYGEDLDWCFRIKEAGWGIYYYPQTSIIHLKGGSARRRPFKIVYEFH 259 + +VG +DED F+Y +D++W +R K+AG+ + Y ++ + H G + + F Y F Sbjct: 177 ALRRVGIMDEDNFIYWDDIEWGYRFKKAGYKVVTYGKSKVWHKMGVAQKTNTFGTYY-FW 235 Query: 260 RAMILFHRKH 269 R I F K+ Sbjct: 236 RNRIRFFAKY 245 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.323 0.139 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 23,405,452 Number of extensions: 974785 Number of successful extensions: 1602 Number of sequences better than 1.0e-05: 38 Number of HSP's gapped: 1614 Number of HSP's successfully gapped: 44 Length of query: 330 Length of database: 38,378,431 Length adjustment: 107 Effective length of query: 223 Effective length of database: 26,037,693 Effective search space: 5806405539 Effective search space used: 5806405539 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 116 (49.3 bits)