BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0550.0001.p
         (148 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGc871 [S] COG2128 Uncharacterized conserved protein                  119   2e-27
PA0269 [S] COG2128 Uncharacterized conserved protein                  118   3e-27
SMb20029 [S] COG2128 Uncharacterized conserved protein                109   2e-24
mll6874 [S] COG2128 Uncharacterized conserved protein                 106   2e-23
mll1641 [S] COG2128 Uncharacterized conserved protein                 105   2e-23

>AGc871 [S] COG2128 Uncharacterized conserved protein
          Length = 167

 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 58/138 (42%), Positives = 82/138 (59%)

Query: 1   MSLRFNYRAVNEQAFRAMMTLEQYGGGRIKDKVLYELVKIRVSQINGCAFCLDMHAKDLM 60
           M  R NY   + +AF+A+M LE Y      +     L+K+R S INGCAFC+DMH K+  
Sbjct: 15  MKTRINYAKASPEAFKAVMALENYVQSSGLEHRFIHLIKLRASIINGCAFCVDMHVKESR 74

Query: 61  KLGDYADHILLLSVWREVPLFTDKEKALLELAETVTLISQAGVPAALYDKVMEHISQEEF 120
             G     I L+SVWRE P++T++E+ALL   + VT I++ G P   ++ +  H S EE 
Sbjct: 75  HDGLSEQWINLMSVWRESPVYTEQERALLGWVDAVTKIAETGAPDDAFETLRAHFSDEEI 134

Query: 121 VDWIMVINTINSWNRIAI 138
           V   + I  IN+WNRIA+
Sbjct: 135 VKITVAIGAINTWNRIAV 152


>PA0269 [S] COG2128 Uncharacterized conserved protein
          Length = 145

 Score =  118 bits (295), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 82/144 (56%)

Query: 1   MSLRFNYRAVNEQAFRAMMTLEQYGGGRIKDKVLYELVKIRVSQINGCAFCLDMHAKDLM 60
           M+ R  +   +  A+ AM+ LE+       ++ L ELV +R SQINGCA+C++MHA D  
Sbjct: 1   MTTRLEWAKASPDAYAAMLGLEKALAKAGLERPLIELVYLRTSQINGCAYCVNMHANDAR 60

Query: 61  KLGDYADHILLLSVWREVPLFTDKEKALLELAETVTLISQAGVPAALYDKVMEHISQEEF 120
           K G+    +  L VW+E P FT +E+A L   E +  +SQ  +P  L D++ EH   +E 
Sbjct: 61  KAGETEQRLQALCVWQETPYFTPRERAALAWTEQLARLSQGALPHGLLDELREHFDDKEI 120

Query: 121 VDWIMVINTINSWNRIAISTGMYP 144
            +  + ++ IN+WNR  +  GM P
Sbjct: 121 AELTLAVSAINAWNRFGVGMGMQP 144


>SMb20029 [S] COG2128 Uncharacterized conserved protein
          Length = 157

 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 71/113 (62%)

Query: 31  DKVLYELVKIRVSQINGCAFCLDMHAKDLMKLGDYADHILLLSVWREVPLFTDKEKALLE 90
           +  L ELVKIR SQINGCA C++MH  +    G+    I LLS WRE P +TD+E+A L 
Sbjct: 30  ESSLIELVKIRASQINGCANCINMHTAEARAKGESEQRIYLLSAWREAPCYTDRERAALA 89

Query: 91  LAETVTLISQAGVPAALYDKVMEHISQEEFVDWIMVINTINSWNRIAISTGMY 143
             ET+T +S+    AA Y+ +    ++EE V   ++IN IN WNR+A+  G++
Sbjct: 90  WTETLTRLSEGHAHAAAYEALKAEFTEEEQVKLTLMINIINGWNRLAVGFGLW 142


>mll6874 [S] COG2128 Uncharacterized conserved protein
          Length = 159

 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 47/113 (41%), Positives = 72/113 (63%)

Query: 31  DKVLYELVKIRVSQINGCAFCLDMHAKDLMKLGDYADHILLLSVWREVPLFTDKEKALLE 90
           +  L ELVK+R SQINGCA C+++HA +  + G+    I LL  WRE P ++D+E+A L 
Sbjct: 32  EHSLTELVKLRGSQINGCANCINLHASEARENGETEQRIYLLPAWREAPCYSDRERAALG 91

Query: 91  LAETVTLISQAGVPAALYDKVMEHISQEEFVDWIMVINTINSWNRIAISTGMY 143
             E +T +S+    A  Y+++  H ++EE +   + IN IN+WNRIA+  G+Y
Sbjct: 92  WTEALTRLSEDTGRAGAYEELKAHFTEEEQIKLTLTINIINAWNRIAVGFGLY 144


>mll1641 [S] COG2128 Uncharacterized conserved protein
          Length = 152

 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 73/112 (65%), Gaps = 1/112 (0%)

Query: 34  LYELVKIRVSQINGCAFCLDMHAKDLMKLGDYADHILLLSVWREVPLFTDKEKALLELAE 93
           L  L+K+R SQINGC+FC++MH+++  + G+    + L++ W+E PLF+++E+A     E
Sbjct: 34  LLHLIKLRASQINGCSFCVEMHSREARRDGETEQRLYLVAAWKESPLFSERERAAFAWTE 93

Query: 94  TVTLISQAGVPAALYDKVMEHISQEEFVDWIMVINTINSWNRIAIS-TGMYP 144
            VTLI+  GV   LY + +EH S+EE V   + +  IN+WNR+ +    ++P
Sbjct: 94  AVTLIANNGVSDELYARTLEHFSEEELVKLSVALGMINTWNRLCVPFQAIHP 145


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.324    0.137    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 10,290,032
Number of extensions: 348580
Number of successful extensions: 5497
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 5493
Number of HSP's successfully gapped: 16
Length of query: 148
Length of database: 38,378,431
Length adjustment: 97
Effective length of query: 51
Effective length of database: 27,191,033
Effective search space: 1386742683
Effective search space used: 1386742683
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 110 (47.0 bits)