BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0548.0045.p (201 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Cgl1227 [J] COG1670 Acetyltransferases, including N-acetylases o... 118 5e-27 CC0691 [J] COG1670 Acetyltransferases, including N-acetylases of... 117 2e-26 DR0604 [J] COG1670 Acetyltransferases, including N-acetylases of... 106 3e-23 BMEII0002 [J] COG1670 Acetyltransferases, including N-acetylases... 97 1e-20 mll2986 [J] COG1670 Acetyltransferases, including N-acetylases o... 91 2e-18 >Cgl1227 [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Length = 212 Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 62/172 (36%), Positives = 95/172 (55%) Query: 18 PMEAAHQGELMALLSNPQIWEYTWRKITSAAQVKELLDTAFANQAKGSELPFVMVEQSTG 77 P+ +L +++ ++W + + + + + E +D A A G P+ ++ +TG Sbjct: 18 PLSHQWTQDLQEAVASQELWRHWFVALPTPEGMAEEIDRRLAEHADGLCAPWAIISAATG 77 Query: 78 RIAGTSRIMHLDLTHRNAEIGCTWISPQFWRTAVNTESKSLLLQYCFETLGLIRVNFTVV 137 R G + LD ++ EIG TW++ T +N K L LQ FE LG+ V F Sbjct: 78 RAVGMTSFHTLDHANKRLEIGRTWMAAHVQGTGINPSVKFLQLQRAFEDLGVNAVEFRTN 137 Query: 138 GDNERSRKAVERIGAVKEGVLRKHRITAEGRILDNVLYSIIDDEWPAVQANL 189 N RSR A+ER+GA ++GVLRKHRI +G + D V+YSI +DEWPAV+ L Sbjct: 138 WHNHRSRAAIERLGAKQDGVLRKHRIHPDGTVRDTVIYSITNDEWPAVKLTL 189 >CC0691 [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Length = 208 Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 63/192 (32%), Positives = 103/192 (53%), Gaps = 4/192 (2%) Query: 9 LNGTFIRMVPMEAAHQGELMALLS-NPQIWEYTWRKITSAAQVKELLDTAFANQA-KGSE 66 L G ++R+ P+ H EL A + +P WE + + E A + +G Sbjct: 19 LQGRYVRLEPVTVDHHDELKAAIDCDPASWEIM--SVNGCGEGFEDFWGALQGETDRGER 76 Query: 67 LPFVMVEQSTGRIAGTSRIMHLDLTHRNAEIGCTWISPQFWRTAVNTESKSLLLQYCFET 126 + F + G++ GTS +++ H EIG T+++P+ VN ESK L+L + F+ Sbjct: 77 IGFAIRRLVDGKVVGTSSYLNIRRLHGGLEIGATFLNPEARSGPVNPESKRLMLGHAFDK 136 Query: 127 LGLIRVNFTVVGDNERSRKAVERIGAVKEGVLRKHRITAEGRILDNVLYSIIDDEWPAVQ 186 G IRV N RS+ A++++GA KEGVLR H++T G + D ++SI D +WPA++ Sbjct: 137 AGAIRVELVTDVRNARSQAAIQKLGATKEGVLRNHKVTWTGHVRDTAVFSITDYDWPAIR 196 Query: 187 ANLHYLLNEKYA 198 L + L+E +A Sbjct: 197 ERLEFRLSETFA 208 >DR0604 [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Length = 188 Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 53/125 (42%), Positives = 78/125 (62%), Gaps = 2/125 (1%) Query: 65 SELPFVMVEQSTGRIAGTSRIMHLDLTHRNAEIGCTWISPQFWRTAVNTESKSLLLQYCF 124 +++ FV+ + G +AG++R + H EIG TW++P+ WRT VN K LLL + F Sbjct: 57 AQIAFVI--EVGGELAGSTRYGDIRPAHSGLEIGWTWLTPEHWRTGVNRRMKRLLLTHAF 114 Query: 125 ETLGLIRVNFTVVGDNERSRKAVERIGAVKEGVLRKHRITAEGRILDNVLYSIIDDEWPA 184 E + + RV N RS++A+ER+GAVKEGVLR H A+G + D V+YS+ +WP Sbjct: 115 EEMDMERVQIKTDILNTRSQRAIERLGAVKEGVLRSHMRRADGTMRDTVMYSVTRADWPE 174 Query: 185 VQANL 189 V+A L Sbjct: 175 VRARL 179 >BMEII0002 [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Length = 242 Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 9 LNGTFIRMVPMEAAHQGELMALLSNPQIWE--YTWRKITSAAQVKELLDTAFANQAKGSE 66 G ++R+ P+ A G+ + S+ + E +TW T A E + ++A S+ Sbjct: 35 FEGRYVRLEPLNAQKHGDELFAASSVEDAEQRFTWLFETPPATRAEF--EPWLDKASKSD 92 Query: 67 LP--FVMVEQSTGRIAGTSRIMHLDLTHRNAEIGCTWISPQFWRTAVNTESKSLLLQYCF 124 P F ++++++G++AG +M +D + EIG + P R TE++ L +QY F Sbjct: 93 DPLFFAVIDKASGKVAGRQALMRIDPANGVIEIGSIYWGPLISRRPAATEAQFLFMQYVF 152 Query: 125 ETLGLIRVNFTVVGDNERSRKAVERIGAVKEGVLRKHRITAEGRILDNVLYSIIDDEWPA 184 + LG R + +N SR+A ER G EG+ R+H + +GR D +S++D EWPA Sbjct: 153 DVLGYRRYEWKCHNENGPSRRAAERFGFRFEGIFRQH-MVVKGRNRDTAWFSVLDSEWPA 211 Query: 185 V-QANLHYLLNEKY 197 + QA +L E + Sbjct: 212 LKQAYQAWLAPENF 225 >mll2986 [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Length = 301 Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 8/188 (4%), Positives = 30/188 (15%), Gaps = 3/188 (1%) Query: 9 LNGTFIRMVPMEAAHQGELMALLSNPQIWEYTWRKITSAAQVKELLDTAFANQAKGSELP 68 + + + + + + A + + + L Sbjct: 19 VGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLM 78 Query: 69 --FVMVEQSTGRIAGTSRIMHLDLTHRNAEIGCTWISPQFWRTAVNTESKSLLLQYCFET 126 + + AVN Sbjct: 79 NKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQEKADLLPH 138 Query: 127 LGLIRVNFTVVGDNERSRKAVERIGAVKEGVLRKHRITAEGRILDNVLYSIIDDEWPAVQ 186 L + + S + + + V + ++ + + Sbjct: 139 LQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHLPEA-THHFPEDYITDRSQRFMASEI 197 Query: 187 ANLHYLLN 194 + Sbjct: 198 IREKLMRF 205 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.319 0.133 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 14,288,725 Number of extensions: 474986 Number of successful extensions: 2578 Number of sequences better than 1.0e-05: 21 Number of HSP's gapped: 2592 Number of HSP's successfully gapped: 21 Length of query: 201 Length of database: 38,378,431 Length adjustment: 101 Effective length of query: 100 Effective length of database: 26,729,697 Effective search space: 2672969700 Effective search space used: 2672969700 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 113 (48.1 bits)