BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0548.0042.p (232 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA0065 [R] COG0546 Predicted phosphatases 215 4e-56 CAC0418 [R] COG0546 Predicted phosphatases 211 1e-54 all2681 [R] COG0546 Predicted phosphatases 180 2e-45 MT2292 [R] COG0546 Predicted phosphatases 132 6e-31 SP0104 [R] COG0546 Predicted phosphatases 119 5e-27 >PA0065 [R] COG0546 Predicted phosphatases Length = 346 Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 9/197 (4%), Positives = 32/197 (16%), Gaps = 4/197 (2%) Query: 7 RLQSILFDLDGTLTDPKEGITKSVEYALGKFNIAVEHPDL--LLPYIGPPLYDSFMEIQG 64 S+ G T + + + P+ Sbjct: 7 PHSSLEVSTLGLGTMTFGEQNSEADAHAQL--DYAVAQGINLIDVAEMYPVPPRPETQGL 64 Query: 65 FTAERSAQAVEFYRERYSTLGMFENAVIPGIPELLEELQGRGFDLYVATSKPTVFAEEII 124 + + + + + Q ++ + Sbjct: 65 TETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTD 124 Query: 125 RHYGLDQYFRHVAGSNLDGTRSKKKEVIQHVLDEHQIAAGTAVMIGDREHDIIGARACGV 184 ++ + + V + A + I + Sbjct: 125 YLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAF 184 Query: 185 ASVGVLIGYGSREELQS 201 + L + + Sbjct: 185 GVMRYLHLADKHDLPRI 201 >CAC0418 [R] COG0546 Predicted phosphatases Length = 346 Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 12/211 (5%), Positives = 33/211 (15%) Query: 11 ILFDLDGTLTDPKEGITKSVEYALGKFNIAVEHPDLLLPYIGPPLYDSFMEIQGFTAERS 70 + ++ G E A + + + + + Sbjct: 5 RIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGL 64 Query: 71 AQAVEFYRERYSTLGMFENAVIPGIPELLEELQGRGFDLYVATSKPTVFAEEIIRHYGLD 130 + +G D + + ++ D Sbjct: 65 TETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTD 124 Query: 131 QYFRHVAGSNLDGTRSKKKEVIQHVLDEHQIAAGTAVMIGDREHDIIGARACGVASVGVL 190 + T K ++ + R GV++ Sbjct: 125 YLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAF 184 Query: 191 IGYGSREELQSAGADYIARNVKDIGDIILHI 221 I + Sbjct: 185 GVMRYLHLADKHDLPRIVTIQNPYSLLNRSF 215 >all2681 [R] COG0546 Predicted phosphatases Length = 346 Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 11/210 (5%), Positives = 43/210 (20%), Gaps = 1/210 (0%) Query: 11 ILFDLDGTLTDPKEGITKSVEYALGKFNIAVEHPDLLLPYIGPPLYDSFMEIQGFTAERS 70 I T +T + + + +++ + + + T + Sbjct: 6 IPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLT 65 Query: 71 A-QAVEFYRERYSTLGMFENAVIPGIPELLEELQGRGFDLYVATSKPTVFAEEIIRHYGL 129 + + S + + + G ++ L + + Sbjct: 66 ETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDY 125 Query: 130 DQYFRHVAGSNLDGTRSKKKEVIQHVLDEHQIAAGTAVMIGDREHDIIGARACGVASVGV 189 ++ K + + + I + Sbjct: 126 LDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFG 185 Query: 190 LIGYGSREELQSAGADYIARNVKDIGDIIL 219 ++ Y + +N + + Sbjct: 186 VMRYLHLADKHDLPRIVTIQNPYSLLNRSF 215 >MT2292 [R] COG0546 Predicted phosphatases Length = 346 Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 17/189 (8%), Positives = 45/189 (23%), Gaps = 2/189 (1%) Query: 6 ERLQSILFDLDGTLTDPKEGITKSVEYALGKFNIAVEHPDLLLPYIGPPLYDSFMEIQGF 65 + ++ + + AL + NI D L L + Sbjct: 77 GSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWP-- 134 Query: 66 TAERSAQAVEFYRERYSTLGMFENAVIPGIPELLEELQGRGFDLYVATSKPTVFAEEIIR 125 + Y S + + + E + R + T+ + + Sbjct: 135 QRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLAD 194 Query: 126 HYGLDQYFRHVAGSNLDGTRSKKKEVIQHVLDEHQIAAGTAVMIGDREHDIIGARACGVA 185 + L + +L + + ++ A + + G + A Sbjct: 195 KHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGA 254 Query: 186 SVGVLIGYG 194 + + Sbjct: 255 RNTLFSRFT 263 >SP0104 [R] COG0546 Predicted phosphatases Length = 346 Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 14/206 (6%), Positives = 26/206 (12%), Gaps = 5/206 (2%) Query: 5 MERLQSILFDLDGTLTDPKEGITKSVEYALGKFNIAVEHPDLLLPYIGPPLYDSFMEIQG 64 M+ + L+ + + I Sbjct: 1 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPR-- 58 Query: 65 FTAERSAQAVEFYRERYSTLGMFENAVIPGIPELLEELQGRGFDLYVATSKPTVFAEEII 124 + + K A Sbjct: 59 PETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNND-KGIRPDQALDRKNIREALHDS 117 Query: 125 RHYGLDQYFRHVAGSNLDGTRSKKKEVIQHVLDEHQIAAGTAVMIGDREHDIIGARACGV 184 Y A + + D + A Sbjct: 118 LKRLQTDYLDLYQVHWPQRPT--NCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRY 175 Query: 185 ASVGVLIGYGSREELQSAGADYIARN 210 V +G L A + R Sbjct: 176 IGVSNETAFGVMRYLHLADKHDLPRI 201 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.320 0.139 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 17,583,174 Number of extensions: 765135 Number of successful extensions: 3063 Number of sequences better than 1.0e-05: 44 Number of HSP's gapped: 3040 Number of HSP's successfully gapped: 44 Length of query: 232 Length of database: 38,378,431 Length adjustment: 103 Effective length of query: 129 Effective length of database: 26,499,029 Effective search space: 3418374741 Effective search space used: 3418374741 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 114 (48.5 bits)