BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0548.0040.p (401 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CAC2716 [GC] COG1819 Glycosyl transferases, related to UDP-glucu... 262 6e-70 CAP0045 [GC] COG1819 Glycosyl transferases, related to UDP-glucu... 246 6e-65 BS_yojK [GC] COG1819 Glycosyl transferases, related to UDP-glucu... 202 8e-52 BS_ydhE [GC] COG1819 Glycosyl transferases, related to UDP-glucu... 200 3e-51 BS_yjiC [GC] COG1819 Glycosyl transferases, related to UDP-glucu... 172 9e-43 >CAC2716 [GC] COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase Length = 407 Score = 262 bits (670), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 152/399 (38%), Positives = 225/399 (56%), Gaps = 9/399 (2%) Query: 4 MARVLFINGGSEGHINPTIGVVQELISRGEEVVYFCIEAYRERIEKTGASVRTIDDQ--K 61 M++VLF+N GH+NPT+G+V EL+ RGEEV YFC + ++E IE GA + ++ Sbjct: 1 MSKVLFMNFPGYGHVNPTLGLVDELVKRGEEVYYFCTDEFKESIEAAGAKFISYGERMSN 60 Query: 62 IINAFIXXXXRNYLPERINGLLLTADIIIPSVLEQIAGEHFDYIIHDSMFGCGRMLAQIF 121 NA R+Y + I ++ + I +L++I G FDY++H SMF G ++AQI Sbjct: 61 FKNANKTAGNRSY-ADIITKIIGMTECEIEDILKKIKGMKFDYVVHCSMFCAGNIIAQIL 119 Query: 122 ELPAINSSTSFAQTQASFDKMLEQPSMKIPAEIAKPIYDR-YHSLTAMLKEKYKVEIHSP 180 ++P+I+S FA T+ KM P + E + PI R Y + ++++Y V++ + Sbjct: 120 KVPSISSFAVFA-TRKEVMKMQYSPITEKELE-SNPIVSRAYSEAKSRIEKRYFVKMPAI 177 Query: 181 YEVLCNPAPLTIVYTTREFQPDGDAFDQTYKFVGPSLSSRNTQAHFDFSAIQGKNPIYIS 240 E++ L I YT +EF + + +D ++KF+GP + R F F ++ K IYIS Sbjct: 178 SELMACRGDLNIAYTAKEFVSNIEYYDDSFKFIGPPIYKRKENLDFPFEKLKNKKVIYIS 237 Query: 241 LGTVFNQA-MDFYKLCFEAFGNTDHTIVMSVGNKTPISDLGEIPKNFIVQNYVPQTELLK 299 LGTVFN + Y + FEAFG +D +VMS N S+ IPKNFIV+NYVPQTE+LK Sbjct: 238 LGTVFNNTNSNLYNIFFEAFGGSDVVVVMSAYN-IDTSNFN-IPKNFIVRNYVPQTEILK 295 Query: 300 QISLFITHGGMNSTHEALYYGVPLVVIPQSADQPXXXXXXXXXXXXXXLQMQSLTANGLR 359 ITH GMNST + +Y VP V IP ADQ L LTA LR Sbjct: 296 YADAAITHAGMNSTSDLIYNKVPFVAIPIGADQLYMASRAKELGAAIVLNKDKLTAKELR 355 Query: 360 EAAEQVLNHPSYKKAVDNMKASLQRSGGYRQAADEIIAF 398 E+ +V+ SY + ++ ++ + +GGYR+ A+EI F Sbjct: 356 ESVNKVMVDASYLENIEKIRDVFREAGGYRKGAEEIFKF 394 >CAP0045 [GC] COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase Length = 406 Score = 246 bits (627), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 147/408 (36%), Positives = 223/408 (54%), Gaps = 17/408 (4%) Query: 4 MARVLFINGGSEGHINPTIGVVQELISRGEEVVYFCIEAYRERIEKTGASVR----TIDD 59 M ++LF+ + GH+NPT+G++ EL+ RG+EV YFC E +RERIEKTGA + +D Sbjct: 1 MGKILFLGIPAYGHVNPTLGIISELVKRGQEVTYFCTEEFRERIEKTGAIFKDYGSAMDP 60 Query: 60 QKIINAF-IXXXXRNYLPERINGLLLTADIIIPSVLEQIAGEHFDYIIHDSMFGCGRMLA 118 + F + L I L + I SVL++ G FDYI + + G +LA Sbjct: 61 SNRKHHFSASNMTKETLIAIIEKSLDICEKAIESVLDKTNGTKFDYIGYAAACPFGSLLA 120 Query: 119 QIFELPAINSSTSFAQTQASFDKMLE---QPSMKIPAEIAKPIYDRYHSLTAMLKEKYKV 175 QI +LP+ +S FA K LE + SMK PI ++Y L LKEKY + Sbjct: 121 QILKLPSFSSFAIFATPDEIMPKSLEGITEESMK-----DTPIMEKYMKLKYGLKEKYDI 175 Query: 176 EIHSPYEVLCNPAPLTIVYTTREFQPDGDAFDQTYKFVGPSLSSRNTQ-AHFDFSAIQGK 234 E+ ++ N + YT++ F P+ +D ++KF+GP + R ++F + I+ K Sbjct: 176 ELPEIKKLFFNKGDVNFAYTSKYFIPNIQYYDDSFKFIGPPIYDRKEDLSNFPYEEIKDK 235 Query: 235 NPIYISLGTVF-NQAMDFYKLCFEAFGNTDHTIVMSVGNKTPISDLGEIPKNFIVQNYVP 293 IYISLGTV+ N + Y+ F AF N D +VM+ K +S +IPKNF+V+NY+ Sbjct: 236 KVIYISLGTVYSNFDIKLYETFFNAFKNEDVVVVMT-AYKVDLSQF-DIPKNFVVRNYIS 293 Query: 294 QTELLKQISLFITHGGMNSTHEALYYGVPLVVIPQSADQPXXXXXXXXXXXXXXLQMQSL 353 QTE+LK + +TH GMNST++ L+ VP V IP ADQP L + +L Sbjct: 294 QTEILKYANAAVTHSGMNSTNDLLFNSVPFVAIPLGADQPYMASRTADLGACIKLDIDTL 353 Query: 354 TANGLREAAEQVLNHPSYKKAVDNMKASLQRSGGYRQAADEIIAFLGR 401 T LR + +V+ + +Y + + + S + SGGY++AA+E++ R Sbjct: 354 TPELLRNSVYEVMTNQNYMENIRKINNSFRESGGYKRAAEEVLKLKAR 401 >BS_yojK [GC] COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase Length = 287 Score = 202 bits (514), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 105/277 (37%), Positives = 158/277 (57%), Gaps = 2/277 (0%) Query: 120 IFELPAINSSTSFAQTQASFDKMLEQPSMKIPAEIAKPIYDRYHSLTAMLKEKYKVEIHS 179 + +LP + T+FA + F K + MK E + P Y+ Y L L ++ EI Sbjct: 1 MLKLPRFSLCTTFAMNE-EFAKEMMGAYMKGSLEDS-PHYESYQQLAETLNADFQAEIKK 58 Query: 180 PYEVLCNPAPLTIVYTTREFQPDGDAFDQTYKFVGPSLSSRNTQAHFDFSAIQGKNPIYI 239 P++V LTIV+T+R FQP + F + Y FVGPS++ R F F I +N ++I Sbjct: 59 PFDVFLADGDLTIVFTSRGFQPLAEQFGERYVFVGPSITERAGNNDFPFDQIDNENVLFI 118 Query: 240 SLGTVFNQAMDFYKLCFEAFGNTDHTIVMSVGNKTPISDLGEIPKNFIVQNYVPQTELLK 299 S+GT+FN F+ C E + D +V+S+G S+L +IP+NFIV+ YVPQ E+LK Sbjct: 119 SMGTIFNNQKQFFNQCLEVCKDFDGKVVLSIGKHIKTSELNDIPENFIVRPYVPQLEILK 178 Query: 300 QISLFITHGGMNSTHEALYYGVPLVVIPQSADQPXXXXXXXXXXXXXXLQMQSLTANGLR 359 + SLF+THGGMNST E LY+ PLVVIP DQ ++ + L+ + L+ Sbjct: 179 RASLFVTHGGMNSTSEGLYFETPLVVIPMGGDQFVVADQVEKVGAGKVIKKEELSESLLK 238 Query: 360 EAAEQVLNHPSYKKAVDNMKASLQRSGGYRQAADEII 396 E ++V+N+ SY + + SL+ +GG ++AAD I+ Sbjct: 239 ETIQEVMNNRSYAEKAKEIGQSLKAAGGSKKAADSIL 275 >BS_ydhE [GC] COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase Length = 381 Score = 200 bits (509), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 113/378 (29%), Positives = 189/378 (50%), Gaps = 6/378 (1%) Query: 18 INPTIGVVQELISRGEEVVYFCIEAYRERIEKTGASVRTIDDQKIINAFIXXXXRNYLPE 77 +NPT+G+ + +G +V Y E Y++R+E GA+V D + I N + + Sbjct: 1 MNPTLGITKAFSDKGYDVHYISTEKYKKRLEAAGATVHLHRDL-LRTTPIHVGSPNGILD 59 Query: 78 RINGLLLTADIIIPSVLEQIAGEHFDYIIHDSMFGCGRMLAQIFELPAINSSTSFAQTQA 137 + + T+ I+ V + FD++ +D FG G ++ ++P ++SS SF + Sbjct: 60 FVKIHIKTSLDILQIVKDLSKSIQFDFVYYDK-FGAGELVRDYLDIPGVSSSASFLFGEE 118 Query: 138 SFDKMLEQPSMKIPAEIAKPIYDRYHSLTAMLKEKYKVEIHSPYEVLCNPAPLTIVYTTR 197 + P P E+ + D L A +KE Y V + + + N L +VYT+R Sbjct: 119 HLKILPLHPESGAPLELDQECED----LLAKMKETYGVAPKNLVQFMNNKGELNVVYTSR 174 Query: 198 EFQPDGDAFDQTYKFVGPSLSSRNTQAHFDFSAIQGKNPIYISLGTVFNQAMDFYKLCFE 257 FQP+ D F F+GPS R + F ++ + IYIS+GTV + DF+ LC + Sbjct: 175 YFQPESDRFGDECLFIGPSFPKRAEKTDFPIEQLKDEKVIYISMGTVLDHTEDFFNLCID 234 Query: 258 AFGNTDHTIVMSVGNKTPISDLGEIPKNFIVQNYVPQTELLKQISLFITHGGMNSTHEAL 317 AF + +V++ G K ++ L + P+NFI+ YVPQ E+L+Q +FITHGGMNS +E + Sbjct: 235 AFSGFNGKVVIAAGEKADLTKLKQAPENFIIAPYVPQLEVLEQSDVFITHGGMNSVNEGI 294 Query: 318 YYGVPLVVIPQSADQPXXXXXXXXXXXXXXLQMQSLTANGLREAAEQVLNHPSYKKAVDN 377 ++ VPLVV+P DQP + + A L++A ++VL + Y + Sbjct: 295 HFSVPLVVMPHDKDQPMVAQRLSELHAGYVISKDEVNAQILKQAVDEVLRNDQYTAGIKK 354 Query: 378 MKASLQRSGGYRQAADEI 395 + S + + + I Sbjct: 355 INQSFKECMDMEEVMERI 372 >BS_yjiC [GC] COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase Length = 276 Score = 172 bits (436), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 0/385 (0%), Positives = 0/385 (0%), Gaps = 33/385 (8%) Query: 9 FINGGSEGHINPTIGVVQELISRGEEVVYFCIEAYRERIEKTGASVRTIDDQKIINAFIX 68 + + + + + T N Sbjct: 8 ALQSQIITDAHFLHHPIVDSEFTRKLKYARMDSENIYLPPLTRG-----------NNHNY 56 Query: 69 XXXRNYLPERINGLLLTADI----------IIPSVLEQIAGEHFDYIIHDSMFGCGRMLA 118 +++ + ++ + G Sbjct: 57 DGKSVVEIRKLDISKEPWPFNYVTGACRESDGITTTGRMLYRNLKITSALDEIYGGICKK 116 Query: 119 QIFELPAINSSTSFAQTQASFDKMLEQPSMKIPAEIAKPIYDRYHSLTAMLKEKYKVEIH 178 + S +E + + Sbjct: 117 AHATTELAEGLRLNLFMK-SPFDPVE--------DYTVHEITLGPGCNVPG-YAGTTIGY 166 Query: 179 SPYEVLCNPAPLTIVYTTREFQPDGDAFDQTYKFVGPSLSSRNTQAHFDFSAIQGKNPIY 238 + + A R T + Sbjct: 167 I-STLPASQAKRWTNEQPRIDIYIDQIMTVTGVANSSGFALAALLNANIELG-NDPIIGI 224 Query: 239 ISLGTVFNQAMDFYKLCFEAFGNTDHTIVMSVGNKTPISDLGEIPKNFIVQNYVPQTELL 298 Sbjct: 225 284 Query: 299 KQISLFITHGGMNSTHEALYYGVPLVVIPQSADQPXXXXXXXXXXXXXXLQMQSLTANGL 358 Sbjct: 285 344 Query: 359 REAAEQVLNHPSYKKAVDNMKASLQ 383 Sbjct: 345 369 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.320 0.136 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 26,994,776 Number of extensions: 1017107 Number of successful extensions: 1985 Number of sequences better than 1.0e-05: 15 Number of HSP's gapped: 1968 Number of HSP's successfully gapped: 15 Length of query: 401 Length of database: 38,378,431 Length adjustment: 109 Effective length of query: 292 Effective length of database: 25,807,025 Effective search space: 7535651300 Effective search space used: 7535651300 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 117 (49.7 bits)