BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0547.0046.p
         (102 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BH2920 [P] COG0607 Rhodanese-related sulfurtransferase                 85   3e-17
SA1578 [P] COG0607 Rhodanese-related sulfurtransferase                 79   2e-15
BS_ytwF [P] COG0607 Rhodanese-related sulfurtransferase                79   2e-15
Cgl0054 [P] COG0607 Rhodanese-related sulfurtransferase                74   4e-14
L193291 [P] COG0607 Rhodanese-related sulfurtransferase                74   5e-14

>BH2920 [P] COG0607 Rhodanese-related sulfurtransferase
          Length = 123

 Score = 84.7 bits (208), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 2/99 (2%)

Query: 1   MNEIPQITAQELRQRL-ESGEDLVLIDVREDEEVAFGMIPGAKHIPMGEIPQHTEELPQE 59
           ++ I Q+   EL   L E G++ +++DVRE EE   G IPG   +PM  IP    E+ +E
Sbjct: 5   LDGIEQVEETELAALLNEKGDETIVVDVREPEEYEAGHIPGLPLLPMSSIPAVVAEMDKE 64

Query: 60  AEFVFICRSGARSQRVCEYLQQFGYR-TSNLSGGMIEWN 97
             ++F+CRSG+RSQ V  YL+  G+R   N +GGM+EW 
Sbjct: 65  KSYIFVCRSGSRSQNVALYLKDQGFRDVKNYAGGMLEWT 103


>SA1578 [P] COG0607 Rhodanese-related sulfurtransferase
          Length = 103

 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 50/93 (53%)

Query: 6  QITAQELRQRLESGEDLVLIDVREDEEVAFGMIPGAKHIPMGEIPQHTEELPQEAEFVFI 65
           IT  EL+ +L   + + ++DVR DEE A G IP AK IPM  IP +     +   +  +
Sbjct: 3  SITTDELKNKLFESKPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDNLNSFNKNEIYYIV 62

Query: 66 CRSGARSQRVCEYLQQFGYRTSNLSGGMIEWNE 98
          C  G RS +V EYL+  G    N+ GGM  W +
Sbjct: 63 CAGGVRSAKVVEYLEANGIDAVNVEGGMHAWGD 95


>BS_ytwF [P] COG0607 Rhodanese-related sulfurtransferase
          Length = 68

 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 44/60 (73%)

Query: 37 MIPGAKHIPMGEIPQHTEELPQEAEFVFICRSGARSQRVCEYLQQFGYRTSNLSGGMIEW 96
          MIP A HI MG+IP+  E L ++ E+VFICRSG RS  VC+YL + G++T N+ GGM+ W
Sbjct: 1  MIPQAVHIRMGDIPEKMETLDKDKEYVFICRSGMRSMNVCKYLDEQGFKTVNVEGGMMAW 60


>Cgl0054 [P] COG0607 Rhodanese-related sulfurtransferase
          Length = 97

 Score = 74.3 bits (181), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 48/73 (65%)

Query: 24 LIDVREDEEVAFGMIPGAKHIPMGEIPQHTEELPQEAEFVFICRSGARSQRVCEYLQQFG 83
          ++DVRE+ E+A G+IP A HIPMGE+    +EL Q    + +CRSG RS +V   L+Q G
Sbjct: 17 ILDVRENFEIAEGIIPEAVHIPMGELNFRFKELDQNRPVIVVCRSGNRSTQVANALKQAG 76

Query: 84 YRTSNLSGGMIEW 96
          Y   +++GGM  W
Sbjct: 77 YTAYSMTGGMSAW 89


>L193291 [P] COG0607 Rhodanese-related sulfurtransferase
          Length = 125

 Score = 73.9 bits (180), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 2/82 (2%)

Query: 16  LESGEDLVLIDVREDEEVAFGMIPGAKHIPMGEIPQHTEELPQEAEFVFICRSGARSQRV 75
           L   E+ V++DVRED E   G +P AK+IP+ ++ +   E+        IC+SGARS R 
Sbjct: 37  LTESENPVIVDVREDFEYNSGHVPNAKNIPLSQLEERYAEITDGT--YLICQSGARSARA 94

Query: 76  CEYLQQFGYRTSNLSGGMIEWN 97
           C+YL   G  T N+SGG I WN
Sbjct: 95  CQYLSTKGIDTINISGGTIAWN 116


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.317    0.135    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 8,174,550
Number of extensions: 364321
Number of successful extensions: 793
Number of sequences better than 1.0e-05: 55
Number of HSP's gapped: 799
Number of HSP's successfully gapped: 55
Length of query: 102
Length of database: 38,378,431
Length adjustment: 70
Effective length of query: 32
Effective length of database: 30,305,051
Effective search space: 969761632
Effective search space used: 969761632
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 109 (46.6 bits)