BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0541.0067.p (269 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value VNG0719G [G] COG0647 Predicted sugar phosphatases of the HAD sup... 173 3e-43 STM1742 [E] COG4608 ABC-type oligopeptide transport system, ATPa... 142 5e-34 VNG0882Gm [G] COG0647 Predicted sugar phosphatases of the HAD su... 135 6e-32 BH1074 [G] COG0647 Predicted sugar phosphatases of the HAD super... 135 8e-32 FN1255 [G] COG0647 Predicted sugar phosphatases of the HAD super... 135 9e-32 >VNG0719G [G] COG0647 Predicted sugar phosphatases of the HAD superfamily Length = 346 Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 16/257 (6%), Positives = 40/257 (15%), Gaps = 5/257 (1%) Query: 6 AYETYFFDLDGTIFIGDLLLPGVRQTLQYLREQGKQVLFLSNTTIRTREECRNRLRLMGV 65 + LD + G L+ R + + + + R +L + Sbjct: 28 SEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASK 87 Query: 66 EARXXXXXXXXXXXXXYF-REMQGMNRRPQVLVIGEQALKYEVAGGGTVLTDEPMEATHV 124 + R+ + ++ + P Sbjct: 88 VSGPSRNNDKGIRPDQALDRKNIREA----LHDSLKRLQTDYLDLYQVHWPQRPTNCFGK 143 Query: 125 LVGMDRDFDYEKLHRAMKAVRAGAYLIAANPDPNCPVVGDLLPDTWAMVKAIEAASCGTV 184 L D A + + Sbjct: 144 LGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVT 203 Query: 185 QEIIGKPSAYYAEKVLEQSGTRRENCLMVGDRMDTDIRFGLSHGINTALVLTGVTAREDL 244 + E L + L+ + G Sbjct: 204 IQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFT 263 Query: 245 EQYSAMPDHIWTSMSEM 261 + ++ Sbjct: 264 RYSGEQTQKAVAAYVDI 280 >STM1742 [E] COG4608 ABC-type oligopeptide transport system, ATPase component Length = 334 Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 14/256 (5%), Positives = 47/256 (18%), Gaps = 5/256 (1%) Query: 8 ETYFFDLDGTIFIGDLLLPGVRQTLQYLREQGKQVLFLSNTTIRTREECRNRLRLMGVEA 67 E L+ + +Q + K V ++ G Sbjct: 6 EQRKVLLEIADLKVHFDIKEGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKST 65 Query: 68 RXXXXXXXXXXXXXYFREMQGMNRRPQVLVIGEQALKYEVAGGGTVLTDEPMEATHVLVG 127 + + E + Sbjct: 66 FARAIIGLVKATDGKVAWLGK---DLLGMKADEWREVRSDIQMIFQDPLA--SLNPRMTI 120 Query: 128 MDRDFDYEKLHRAMKAVRAGAYLIAANPDPNCPVVGDLLPDTWAMVKAIEAASCGTVQEI 187 + + + + + + + A + + I Sbjct: 121 GEIIAEPLRTYHPKLSRQDVRDRVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALI 180 Query: 188 IGKPSAYYAEKVLEQSGTRRENCLMVGDRMDTDIRFGLSHGINTALVLTGVTAREDLEQY 247 + E V + + + + ++ ++ L + V+ ++ R + Sbjct: 181 LEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 240 Query: 248 SAMPDHIWTSMSEMLQ 263 + Sbjct: 241 GHAVELGTYDEVYHNP 256 >VNG0882Gm [G] COG0647 Predicted sugar phosphatases of the HAD superfamily Length = 346 Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 18/259 (6%), Positives = 39/259 (15%), Gaps = 9/259 (3%) Query: 5 LAYETYFFDLDGTIFIGDLLLPGVRQTLQYLREQGKQVLFLSNTTIRTREECRNRLRLMG 64 + Y +G + Q + + E Sbjct: 1 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPE 60 Query: 65 VEARXXXXXXXXXXXXXYF-REMQGMNRRPQVLVIGEQALKYEVAGGGTVLTDEPMEATH 123 + + + K + Sbjct: 61 TQGLTETYVGNWLAKHGSREKLIIASKVSG----PSRNNDKGIRPDQALDRKNIREALHD 116 Query: 124 VLVGMDRDFDYEKLHRAMKAVRAGA-YLIAANPDPNCPVVGDLLPDTWAMVKAIEAASCG 182 L + D+ + L + D V D A + Sbjct: 117 SLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYI 176 Query: 183 TVQEIIGKPSAYYAEKVLEQSGTRRENCLMVGDRMDTDIRFGLSHGINTALVLTGVTARE 242 V Y + R ++ GL+ V + Sbjct: 177 GVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSC- 235 Query: 243 DLEQYSAMPDHIWTSMSEM 261 + + Sbjct: 236 --LGFGTLTGKYLNGAKPA 252 >BH1074 [G] COG0647 Predicted sugar phosphatases of the HAD superfamily Length = 346 Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 15/261 (5%), Positives = 40/261 (15%), Gaps = 10/261 (3%) Query: 7 YETYFFDLDGTIFIGDLLLPGVRQTLQYLREQGKQVLFLSNTTIRTREECRNRLRLMGVE 66 + L+ + + G + + Q + I E R Sbjct: 4 HRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQG 63 Query: 67 ARXXXXXXXXXXXXXYFREMQGMNRRPQVL-VIGEQALKYEVAGGGTVL---TDEPMEA- 121 + + +V Sbjct: 64 LTETYVGNWLAKHGSREKLIIA----SKVSGPSRNNDKGIRPDQALDRKNIREALHDSLK 119 Query: 122 THVLVGMDRDFDYEKLHRAMKAVRAGAYLIAANPDPNCPVVGDLLPDTWAMVKAIEAASC 181 +D + + G + P + D L + K Sbjct: 120 RLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVS 179 Query: 182 GTVQ-EIIGKPSAYYAEKVLEQSGTRRENCLMVGDRMDTDIRFGLSHGINTALVLTGVTA 240 ++ + + L+ G+ Sbjct: 180 NETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFG 239 Query: 241 REDLEQYSAMPDHIWTSMSEM 261 + + + Sbjct: 240 TLTGKYLNGAKPAGARNTLFS 260 >FN1255 [G] COG0647 Predicted sugar phosphatases of the HAD superfamily Length = 346 Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 18/254 (7%), Positives = 41/254 (16%), Gaps = 6/254 (2%) Query: 10 YFFDLDGTIFIGDLLLPGVRQTLQYLREQGKQVLFLSNTTIRTREECRNRLRLMGVEARX 69 F + L L + + + E L +R Sbjct: 21 MTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSRE 80 Query: 70 XXXXXXXXXXXXYFREMQGMNRRPQVLVIGEQALKYEVAGGGTVLTDE-PMEATHVLVGM 128 + RP + + + + TD + H Sbjct: 81 KLIIASKVSGPSRNNDKG---IRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRP 137 Query: 129 DRDFDYEKLHRAMKAVRAGAYLIAANPDPNCPV-VGDLLPDTWAMVKAIEAASCGTVQEI 187 F A + + + + Sbjct: 138 TNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMR-YLHLADKH 196 Query: 188 IGKPSAYYAEKVLEQSGTRRENCLMVGDRMDTDIRFGLSHGINTALVLTGVTAREDLEQY 247 + + V ++ G T A+ + Sbjct: 197 DLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARN 256 Query: 248 SAMPDHIWTSMSEM 261 + S + Sbjct: 257 TLFSRFTRYSGEQT 270 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.321 0.137 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 19,051,453 Number of extensions: 770683 Number of successful extensions: 2184 Number of sequences better than 1.0e-05: 19 Number of HSP's gapped: 2157 Number of HSP's successfully gapped: 19 Length of query: 269 Length of database: 38,378,431 Length adjustment: 105 Effective length of query: 164 Effective length of database: 26,268,361 Effective search space: 4308011204 Effective search space used: 4308011204 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 115 (48.9 bits)