BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0533.0009.p (195 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BH3001 [R] COG0110 Acetyltransferase (isoleucine patch superfamily) 285 3e-77 BS_yyaI [R] COG0110 Acetyltransferase (isoleucine patch superfam... 248 5e-66 ylaD [R] COG0110 Acetyltransferase (isoleucine patch superfamily) 246 2e-65 ZylaD [R] COG0110 Acetyltransferase (isoleucine patch superfamily) 246 2e-65 >BH3001 [R] COG0110 Acetyltransferase (isoleucine patch superfamily) Length = 186 Score = 285 bits (729), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 126/186 (67%), Positives = 158/186 (84%) Query: 10 MKTEKQKMLNGELYMGWDPELTRERAYARRMTRIYNQTTELDDELRVQILKELMGSTGEN 69 M+TEK+KML GE Y WDPEL ++R ARR+TR++NQTTE +++ R +++KEL GS GE+ Sbjct: 1 MRTEKEKMLAGERYKAWDPELVKDRERARRLTRLFNQTTETEEKQRTELIKELFGSMGES 60 Query: 70 LGMEPNIRVDYGYNIHVGEHFYANFDCTILDVCEVRIGNNCLFGPGVQVYTATHPVDPSE 129 + +EP R DYGYNIHVG +F+ANFDC ILDVCEVRIG NC+ PGV +YTATHP+ P E Sbjct: 61 VNIEPTFRCDYGYNIHVGNNFFANFDCVILDVCEVRIGANCMLAPGVHIYTATHPIHPLE 120 Query: 130 RIKGPEYGKPVTIGNNVWVGGQAIINPGVTIGDNVVIASGAVVTKDVPDNVIVGGNPAKV 189 R++GPEYGKPVTI NNVW+GG+AI+NPGVTIG+N VIASG+VVTKDVP+NV+V GNPAKV Sbjct: 121 RVEGPEYGKPVTIRNNVWIGGRAIVNPGVTIGNNAVIASGSVVTKDVPENVVVAGNPAKV 180 Query: 190 IKKIDL 195 I+ ID+ Sbjct: 181 IQTIDV 186 >BS_yyaI [R] COG0110 Acetyltransferase (isoleucine patch superfamily) Length = 184 Score = 248 bits (633), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 112/184 (60%), Positives = 146/184 (79%), Gaps = 1/184 (0%) Query: 10 MKTEKQKMLNGELYMGWDPELTRERAYARRMTRIYNQTTELDDELRVQILKELMGSTGEN 69 ++TEK+KM GELY D +L ER +AR++ R YN+T E DD +R ++LKEL+GS G+ Sbjct: 2 LRTEKEKMAAGELYNSEDQQLLLERKHARQLIRQYNETPE-DDAVRTKLLKELLGSVGDQ 60 Query: 70 LGMEPNIRVDYGYNIHVGEHFYANFDCTILDVCEVRIGNNCLFGPGVQVYTATHPVDPSE 129 + + P R DYGY+IH+G+H + NFDC ILDVCEVRIG +CL PGV +YTA HP+DP E Sbjct: 61 VTILPTFRCDYGYHIHIGDHTFVNFDCVILDVCEVRIGCHCLIAPGVHIYTAGHPLDPIE 120 Query: 130 RIKGPEYGKPVTIGNNVWVGGQAIINPGVTIGDNVVIASGAVVTKDVPDNVIVGGNPAKV 189 R G E+GKPVTIG+ VW+GG+A+INPGVTIGDN VIASG+VVTKDVP N +VGGNPA++ Sbjct: 121 RKSGKEFGKPVTIGDQVWIGGRAVINPGVTIGDNAVIASGSVVTKDVPANTVVGGNPARI 180 Query: 190 IKKI 193 +K++ Sbjct: 181 LKQL 184 >ylaD [R] COG0110 Acetyltransferase (isoleucine patch superfamily) Length = 183 Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 114/184 (61%), Positives = 141/184 (76%), Gaps = 1/184 (0%) Query: 10 MKTEKQKMLNGELYMGWDPELTRERAYARRMTRIYNQTTELDDELRVQILKELMGSTGEN 69 M TEK+KM+ GELY D L+R+R AR++ YN + + LR QIL +L G E Sbjct: 1 MSTEKEKMIAGELYRSADETLSRDRLRARQLIHRYNHSLAEEHTLRQQILADLFGQVTEA 60 Query: 70 LGMEPNIRVDYGYNIHVGEHFYANFDCTILDVCEVRIGNNCLFGPGVQVYTATHPVDPSE 129 +EP R DYGYNI +G +F+ANFDC +LDVC +RIG+NC+ PGV +YTATHP+DP Sbjct: 61 Y-IEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVA 119 Query: 130 RIKGPEYGKPVTIGNNVWVGGQAIINPGVTIGDNVVIASGAVVTKDVPDNVIVGGNPAKV 189 R G E GKPVTIGNNVW+GG+A+INPGVTIGDNVV+ASGAVVTKDVPDNV+VGGNPA++ Sbjct: 120 RNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGAVVTKDVPDNVVVGGNPARI 179 Query: 190 IKKI 193 IKK+ Sbjct: 180 IKKL 183 >ZylaD [R] COG0110 Acetyltransferase (isoleucine patch superfamily) Length = 183 Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 114/184 (61%), Positives = 141/184 (76%), Gaps = 1/184 (0%) Query: 10 MKTEKQKMLNGELYMGWDPELTRERAYARRMTRIYNQTTELDDELRVQILKELMGSTGEN 69 M TEK+KM+ GELY D L+R+R AR++ YN + + LR QIL +L G E Sbjct: 1 MSTEKEKMIAGELYRSADETLSRDRLRARQLIHRYNHSLAEEHTLRQQILADLFGQVTEA 60 Query: 70 LGMEPNIRVDYGYNIHVGEHFYANFDCTILDVCEVRIGNNCLFGPGVQVYTATHPVDPSE 129 +EP R DYGYNI +G +F+ANFDC +LDVC +RIG+NC+ PGV +YTATHP+DP Sbjct: 61 Y-IEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVA 119 Query: 130 RIKGPEYGKPVTIGNNVWVGGQAIINPGVTIGDNVVIASGAVVTKDVPDNVIVGGNPAKV 189 R G E GKPVTIGNNVW+GG+A+INPGVTIGDNVV+ASGAVVTKDVPDNV+VGGNPA++ Sbjct: 120 RNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGAVVTKDVPDNVVVGGNPARI 179 Query: 190 IKKI 193 IKK+ Sbjct: 180 IKKL 183 Score = 242 bits (618), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 114/184 (61%), Positives = 141/184 (76%), Gaps = 1/184 (0%) Query: 10 MKTEKQKMLNGELYMGWDPELTRERAYARRMTRIYNQTTELDDELRVQILKELMGSTGEN 69 M TEK+KM+ GELY D L+R+R AR++ YN + + LR QIL +L G E Sbjct: 1 MSTEKEKMIAGELYRSADETLSRDRLRARQLIHRYNHSLAEEHTLRQQILADLFGQVTEA 60 Query: 70 LGMEPNIRVDYGYNIHVGEHFYANFDCTILDVCEVRIGNNCLFGPGVQVYTATHPVDPSE 129 +EP R DYGYNI +G +F+ANFDC +LDVC +RIG+NC+ PGV +YTATHP+DP Sbjct: 61 Y-IEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVA 119 Query: 130 RIKGPEYGKPVTIGNNVWVGGQAIINPGVTIGDNVVIASGAVVTKDVPDNVIVGGNPAKV 189 R G E GKPVTIGNNVW+GG+A+INPGVTIGDNVV+ASGAVVTKDVPDNV+VGGNPA++ Sbjct: 120 RNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGAVVTKDVPDNVVVGGNPARI 179 Query: 190 IKKI 193 IKK+ Sbjct: 180 IKKL 183 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.318 0.139 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 16,107,936 Number of extensions: 719667 Number of successful extensions: 2322 Number of sequences better than 1.0e-05: 89 Number of HSP's gapped: 2242 Number of HSP's successfully gapped: 89 Length of query: 195 Length of database: 38,378,431 Length adjustment: 101 Effective length of query: 94 Effective length of database: 26,729,697 Effective search space: 2512591518 Effective search space used: 2512591518 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 113 (48.1 bits)