BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0531.0016.p
         (255 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SA0700 [S] COG2966 Uncharacterized conserved protein                  206   2e-53
SA0543 [S] COG2966 Uncharacterized conserved protein                  144   1e-34

>SA0700 [S] COG2966 Uncharacterized conserved protein
          Length = 253

 Score =  206 bits (525), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 104/240 (43%), Positives = 160/240 (66%)

Query: 13  HDIIDLCLLAGKIMLQSGAETYRVEDTMSRMAASLGFPGSHSYVTPTVIMFTTSRTEPVK 72
           + +ID+ L+AG+I+L+SGAETYRVEDTM+R+A S G   ++S+V+ T I+F+ +     +
Sbjct: 11  NKVIDVVLIAGRILLESGAETYRVEDTMNRIAHSYGLHNTYSFVSSTAIIFSLNDRTSTR 70

Query: 73  LFRIAERTTDLQKVSEVNDISRRLSERQITANEARERLGVVDDAAHAYPAWLQIAAAALT 132
           L R+ ERTTDL+K++  N +SR++S +++T +EA+     +  A+  Y       AAA+ 
Sbjct: 71  LIRVQERTTDLEKIALTNSLSRKISNKELTIDEAKSEFIHLQHASLQYSFLTNFFAAAIA 130

Query: 133 GACFTVMFKGSLWDALPALLVSGLGFAAATYLHRLVQIRFFAEFTASFLIGLLAFFSVRL 192
              F  MF G   D   A++  G  F   +++ R +QI+FF+EF A+ ++  +A    +L
Sbjct: 131 CGFFLFMFGGVASDCWIAVIAGGSAFLTFSFVQRYIQIKFFSEFVAAAVVISIAATFTKL 190

Query: 193 GVGREMDKIIIGSVMPLVPGLLITNAVRDLMAGHLVSGLSKGADAFLTAFAIGTGIGLVL 252
           G+    D I I SVMPLVPG+LITNA+RDL+AG L++G+S+G +A LTAFAIG G+ +VL
Sbjct: 191 GIATNQDIITIASVMPLVPGILITNAIRDLLAGELLAGMSRGVEAALTAFAIGAGVAIVL 250


>SA0543 [S] COG2966 Uncharacterized conserved protein
          Length = 216

 Score =  144 bits (364), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/215 (38%), Positives = 124/215 (57%)

Query: 40  MSRMAASLGFPGSHSYVTPTVIMFTTSRTEPVKLFRIAERTTDLQKVSEVNDISRRLSER 99
           M+R+A  LG+  S+S+VT TVI FT       ++FRI  R T+L K+S+ N ISR+++  
Sbjct: 1   MTRIAKKLGYSESNSFVTNTVIQFTLHSESFPRIFRITSRDTNLIKISQANKISRQITNN 60

Query: 100 QITANEARERLGVVDDAAHAYPAWLQIAAAALTGACFTVMFKGSLWDALPALLVSGLGFA 159
           +I+  EA+ +L  +  A        +  AAA+    F  +  G L D L A+L   LG+ 
Sbjct: 61  EISLAEAKTQLEKIYVAKRDSSLPFKGFAAAMIAMSFLYLQGGRLIDVLTAILAGSLGYL 120

Query: 160 AATYLHRLVQIRFFAEFTASFLIGLLAFFSVRLGVGREMDKIIIGSVMPLVPGLLITNAV 219
               L R +  +F  EF  S +IG++A     L    ++  III +VMP+VPG+LITNA+
Sbjct: 121 VTEILDRKLHAQFIPEFIGSLVIGIIAVIGHTLIPTGDLATIIIAAVMPIVPGVLITNAI 180

Query: 220 RDLMAGHLVSGLSKGADAFLTAFAIGTGIGLVLSL 254
           +DL  GH++   +K  +A +TAF IG G+G VL L
Sbjct: 181 QDLFGGHMLMFTTKSLEALVTAFGIGAGVGSVLIL 215


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.324    0.136    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 16,886,617
Number of extensions: 671559
Number of successful extensions: 1998
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 2000
Number of HSP's successfully gapped: 3
Length of query: 255
Length of database: 38,378,431
Length adjustment: 104
Effective length of query: 151
Effective length of database: 26,383,695
Effective search space: 3983937945
Effective search space used: 3983937945
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 114 (48.5 bits)