BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0523.0057.p (258 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value lin2639 [P] COG1117 ABC-type phosphate transport system, ATPase ... 315 5e-86 SPy1242 [P] COG1117 ABC-type phosphate transport system, ATPase ... 303 2e-82 SP1397 [P] COG1117 ABC-type phosphate transport system, ATPase c... 301 8e-82 lin2638 [P] COG1117 ABC-type phosphate transport system, ATPase ... 296 2e-80 BS_yqgJ [P] COG1117 ABC-type phosphate transport system, ATPase ... 294 9e-80 >lin2639 [P] COG1117 ABC-type phosphate transport system, ATPase component Length = 271 Score = 315 bits (807), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 146/248 (58%), Positives = 186/248 (75%) Query: 11 SFQTEDLSIFYGTYEAVKGISLPFAQNTVTALIGPSGCGKSTFLRSLNRMNDEISGSTTK 70 + TEDL ++YG A+KG+ L F +N VTALIGPSGCGKST+LR+LNRMNDEI G + Sbjct: 24 AMATEDLHVYYGDNHAIKGVDLTFPENKVTALIGPSGCGKSTYLRALNRMNDEIDGCRME 83 Query: 71 GSIWIDGVDINAPGTDVIKLRQKIGMVWQKPNPFYKSIYDNIAFGPKYHGIKGKAALDEI 130 G I DG++IN D+ +R++IGMV+QKPNPF KSIY+N+AFG K HG+K K + E Sbjct: 84 GQILYDGININRKEVDLYNVRKEIGMVFQKPNPFTKSIYENVAFGLKRHGMKNKKEIMER 143 Query: 131 VESSLRRAALWDEVKDRLKDSALALSGGQQQRLCIARALSVNPQILLLDEPASALDPVST 190 VE SLRRAALWDEVKD L SAL+LSGGQQQRLCIARA+++ P++LLLDEPASALDP+ST Sbjct: 144 VEKSLRRAALWDEVKDDLGKSALSLSGGQQQRLCIARAVAMQPKVLLLDEPASALDPIST 203 Query: 191 GXXXXXXXXXXXXXXXXXVTHNMQQAARISDFTAYFYLGSLVEYDKTEKVFSNPENQMTQ 250 VTHNMQQAAR+SD+T++FYLG +VE+ T ++F+NP+ + T+ Sbjct: 204 SKIEDLINELKNKYTIIIVTHNMQQAARVSDYTSFFYLGEVVEFSGTSELFTNPQEKQTE 263 Query: 251 EYIMGRFG 258 +YI G FG Sbjct: 264 DYISGNFG 271 >SPy1242 [P] COG1117 ABC-type phosphate transport system, ATPase component Length = 267 Score = 303 bits (775), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 140/248 (56%), Positives = 178/248 (71%) Query: 11 SFQTEDLSIFYGTYEAVKGISLPFAQNTVTALIGPSGCGKSTFLRSLNRMNDEISGSTTK 70 + T+DL ++YG EA+KGI + F ++ +TALIGPSGCGKST+LRSLNRMND I + Sbjct: 20 ALATKDLHVYYGAKEAIKGIDMQFEKHKITALIGPSGCGKSTYLRSLNRMNDTIDIARVT 79 Query: 71 GSIWIDGVDINAPGTDVIKLRQKIGMVWQKPNPFYKSIYDNIAFGPKYHGIKGKAALDEI 130 G I G+D+N +V ++R+ +GMV+Q+PNPF KSIY NI F + G+K K LDEI Sbjct: 80 GEILYQGIDVNRKDMNVYEIRKHLGMVFQRPNPFAKSIYKNITFAHERAGVKDKKVLDEI 139 Query: 131 VESSLRRAALWDEVKDRLKDSALALSGGQQQRLCIARALSVNPQILLLDEPASALDPVST 190 VE+SL++AALWD+VKD L SA LSGGQQQRLCIARA+SV P ILL+DEPASALDP++T Sbjct: 140 VETSLKQAALWDQVKDDLHKSAFTLSGGQQQRLCIARAISVKPDILLMDEPASALDPIAT 199 Query: 191 GXXXXXXXXXXXXXXXXXVTHNMQQAARISDFTAYFYLGSLVEYDKTEKVFSNPENQMTQ 250 VTHNMQQAAR SD+TA+FYLG+L+EYDKT +F N + Q T Sbjct: 200 MQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGNLIEYDKTRNIFQNAQCQSTN 259 Query: 251 EYIMGRFG 258 +Y+ G FG Sbjct: 260 DYVSGHFG 267 >SP1397 [P] COG1117 ABC-type phosphate transport system, ATPase component Length = 267 Score = 301 bits (770), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 142/253 (56%), Positives = 179/253 (70%) Query: 6 PVVRESFQTEDLSIFYGTYEAVKGISLPFAQNTVTALIGPSGCGKSTFLRSLNRMNDEIS 65 P + + T+D+ ++YG E++KGI + F +N +TALIGPSG GKST+LRSLNRMND I Sbjct: 15 PEEKVALSTKDVHVYYGKNESIKGIDMQFERNKITALIGPSGSGKSTYLRSLNRMNDTID 74 Query: 66 GSTTKGSIWIDGVDINAPGTDVIKLRQKIGMVWQKPNPFYKSIYDNIAFGPKYHGIKGKA 125 + G I G+D+N P +V ++R+ IGMV+Q+PNPF KSIY NI F + G+K K Sbjct: 75 IAKVTGQILYRGIDVNRPEINVYEMRKHIGMVFQRPNPFAKSIYRNITFAHERAGVKDKQ 134 Query: 126 ALDEIVESSLRRAALWDEVKDRLKDSALALSGGQQQRLCIARALSVNPQILLLDEPASAL 185 LDEIVE+SLR+AALWD+VKD L SAL LSGGQQQRLCIARA+SV P ILL+DEPASAL Sbjct: 135 VLDEIVETSLRQAALWDQVKDDLHKSALTLSGGQQQRLCIARAISVKPDILLMDEPASAL 194 Query: 186 DPVSTGXXXXXXXXXXXXXXXXXVTHNMQQAARISDFTAYFYLGSLVEYDKTEKVFSNPE 245 DP++T VTHNMQQAAR SD+T +FYLG L+EYDKT +F N + Sbjct: 195 DPIATMQLEETMFELKKNFTIIIVTHNMQQAARASDYTGFFYLGDLIEYDKTATIFQNAK 254 Query: 246 NQMTQEYIMGRFG 258 Q T +Y+ G FG Sbjct: 255 LQSTNDYVSGHFG 267 >lin2638 [P] COG1117 ABC-type phosphate transport system, ATPase component Length = 259 Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 138/247 (55%), Positives = 178/247 (72%) Query: 12 FQTEDLSIFYGTYEAVKGISLPFAQNTVTALIGPSGCGKSTFLRSLNRMNDEISGSTTKG 71 +T+D+ +FYG+ +A++ I+L +N VTALIGPSGCGKSTFLR+LNRMND I T G Sbjct: 13 IETKDVDLFYGSKQALQKIALNIKKNQVTALIGPSGCGKSTFLRTLNRMNDLIPNVKTTG 72 Query: 72 SIWIDGVDINAPGTDVIKLRQKIGMVWQKPNPFYKSIYDNIAFGPKYHGIKGKAALDEIV 131 I I G ++ P D++ LR+K+GMV+Q+ NPF SIYDN+A+GP+ HGIK K LDEIV Sbjct: 73 EIHIGGENVQDPKIDMVNLRKKVGMVFQQANPFPFSIYDNVAYGPRMHGIKDKKVLDEIV 132 Query: 132 ESSLRRAALWDEVKDRLKDSALALSGGQQQRLCIARALSVNPQILLLDEPASALDPVSTG 191 E SLR+AALW+EV DRL SA+ +SGGQQQRLCIAR L+V P ++L+DEP SALDP+ST Sbjct: 133 ERSLRQAALWEEVHDRLDRSAIGMSGGQQQRLCIARVLAVKPDVILMDEPTSALDPISTA 192 Query: 192 XXXXXXXXXXXXXXXXXVTHNMQQAARISDFTAYFYLGSLVEYDKTEKVFSNPENQMTQE 251 VTHNMQQA+RISD TA+F G +VE+ T +F+NP + T++ Sbjct: 193 KVEDLILELKKDYTIVIVTHNMQQASRISDETAFFLNGRIVEFADTTSIFTNPAEKETED 252 Query: 252 YIMGRFG 258 YI GRFG Sbjct: 253 YISGRFG 259 >BS_yqgJ [P] COG1117 ABC-type phosphate transport system, ATPase component Length = 269 Score = 294 bits (753), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 141/253 (55%), Positives = 179/253 (70%) Query: 6 PVVRESFQTEDLSIFYGTYEAVKGISLPFAQNTVTALIGPSGCGKSTFLRSLNRMNDEIS 65 P + +DLSI+YG +AV +++ +N VTALIGPSGCGKSTFLR++NRMND I Sbjct: 17 PKQNHVLEVKDLSIYYGNKQAVHHVNMDIEKNAVTALIGPSGCGKSTFLRNINRMNDLIP 76 Query: 66 GSTTKGSIWIDGVDINAPGTDVIKLRQKIGMVWQKPNPFYKSIYDNIAFGPKYHGIKGKA 125 + +G I +G++I +V+ LR++IGMV+QKPNPF KSIY NI KY G + KA Sbjct: 77 SARAEGEILYEGLNILGGNINVVSLRREIGMVFQKPNPFPKSIYANITHALKYAGERNKA 136 Query: 126 ALDEIVESSLRRAALWDEVKDRLKDSALALSGGQQQRLCIARALSVNPQILLLDEPASAL 185 LDEIVE SL +AALWDEVKDRL SAL+LSGGQQQRLCIAR L++ P +LLLDEPASAL Sbjct: 137 VLDEIVEESLTKAALWDEVKDRLHSSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASAL 196 Query: 186 DPVSTGXXXXXXXXXXXXXXXXXVTHNMQQAARISDFTAYFYLGSLVEYDKTEKVFSNPE 245 DP+S VTHNMQQA R+SD TA+F G LVEY +TE++F++P+ Sbjct: 197 DPISNAKIEELITGLKREYSIIIVTHNMQQALRVSDRTAFFLNGELVEYGQTEQIFTSPK 256 Query: 246 NQMTQEYIMGRFG 258 Q T++YI G+FG Sbjct: 257 KQKTEDYINGKFG 269 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.317 0.134 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 17,803,819 Number of extensions: 698172 Number of successful extensions: 8310 Number of sequences better than 1.0e-05: 1841 Number of HSP's gapped: 5574 Number of HSP's successfully gapped: 1925 Length of query: 258 Length of database: 38,378,431 Length adjustment: 104 Effective length of query: 154 Effective length of database: 26,383,695 Effective search space: 4063089030 Effective search space used: 4063089030 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 115 (48.9 bits)