BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0523.0054.p (323 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value L159386 [P] COG0226 ABC-type phosphate transport system, peripla... 226 4e-59 SP1400 [P] COG0226 ABC-type phosphate transport system, periplas... 224 2e-58 L158188 [P] COG0226 ABC-type phosphate transport system, peripla... 210 2e-54 MTH1727 [P] COG0226 ABC-type phosphate transport system, peripla... 155 7e-38 MTH1728 [P] COG0226 ABC-type phosphate transport system, peripla... 147 2e-35 >L159386 [P] COG0226 ABC-type phosphate transport system, periplasmic component Length = 298 Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 123/235 (52%), Positives = 154/235 (65%), Gaps = 9/235 (3%) Query: 47 LSGSILASGSTALQPLVEQVAEKFMETNKDVDIQVQGGGSGTGLTQVAEKQVDIGNSDVF 106 LSG I+A GSTALQPL +Q + +FM N V + VQGGGSG GLTQVA IGNSD+F Sbjct: 39 LSGKIIAGGSTALQPLAQQSSTEFMAKNTGVQVTVQGGGSGVGLTQVAAGSFQIGNSDIF 98 Query: 107 XXXXXXXXXXXXXXXXVDHQVAVVAIAAVSHPDAGVDSLTKQQLVDIFTGKVTNWKEVGG 166 DH+VAVV A + + V +LT QQL D+FTGKVTNWK+VGG Sbjct: 99 AEEKSGIDASAI----TDHKVAVVGFAPIVNAKIDVKNLTSQQLQDVFTGKVTNWKDVGG 154 Query: 167 KDQKIQIINRPSSSGTRATFEGFALGTKTEDLQGSIQEDSSGTVKKMIGETPGAIGYLAL 226 DQKI +I R SGTR F+ FALG TE ++G Q D+SG+V +M+G+TPGAI Y+AL Sbjct: 155 SDQKITVIGRTEGSGTRVNFDKFALGGATE-VKGPTQ-DASGSVVQMVGQTPGAISYVAL 212 Query: 227 SYLDDS--VKTLKYDGVEPSVDNVVSGKYPVWAYEHMYTNGEPNEIV-KAFLDYI 278 SY+D S +K + DGVEP+ NVV+ Y VW+YEHMYTN + KAF+ Y+ Sbjct: 213 SYVDTSKDIKDISIDGVEPTEANVVTNDYKVWSYEHMYTNTKKETAADKAFIKYV 267 >SP1400 [P] COG0226 ABC-type phosphate transport system, periplasmic component Length = 292 Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 115/241 (47%), Positives = 161/241 (66%), Gaps = 6/241 (2%) Query: 46 DLSGSILASGSTALQPLVEQVAEKFMETNKDVDIQVQGGGSGTGLTQVAEKQVDIGNSDV 105 D SI A GSTALQPLVE A++F + + VQGGGSGTGL+QV VDIGNSDV Sbjct: 28 DRGESITAVGSTALQPLVEVAADEFGTIHVGKTVNVQGGGSGTGLSQVQSGAVDIGNSDV 87 Query: 106 FXXXXXXXXXXXXXXXXVDHQVAVVAIAAVSHPDAGVDSLTKQQLVDIFTGKVTNWKEVG 165 F VDH+VAV +A + + + VD+LT +QL IF G+VTNWKEVG Sbjct: 88 FAEEKDGIDASAL----VDHKVAVAGLALIVNKEVDVDNLTTEQLRQIFIGEVTNWKEVG 143 Query: 166 GKDQKIQIINRPSSSGTRATFEGFALGTKTEDLQGSIQEDSSGTVKKMIGETPGAIGYLA 225 GKD I +INR + SG+RATF+ + + + S ++DS+G VK ++ ++PGAI YL+ Sbjct: 144 GKDLPISVINRAAGSGSRATFDTVIM--EGQSAMQSQEQDSNGAVKSIVSKSPGAISYLS 201 Query: 226 LSYLDDSVKTLKYDGVEPSVDNVVSGKYPVWAYEHMYTNGEPNEIVKAFLDYIMTPEVQT 285 L+Y+DDSVK++K +G + S +N+ S +P+W+YEHMYT G+PNE+ FL+++++ E Q Sbjct: 202 LTYIDDSVKSMKLNGYDLSPENISSNNWPLWSYEHMYTLGQPNELAAEFLNFVLSDETQE 261 Query: 286 G 286 G Sbjct: 262 G 262 >L158188 [P] COG0226 ABC-type phosphate transport system, periplasmic component Length = 283 Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 110/230 (47%), Positives = 149/230 (64%), Gaps = 8/230 (3%) Query: 51 ILASGSTALQPLVEQVAEKFMETNKDVDIQVQGGGSGTGLTQVAEKQVDIGNSDVFXXXX 110 + A GSTALQP+VE + +M+ N D I VQGGGSG GL QVA IGNSD+F Sbjct: 28 VTAGGSTALQPMVEHASMAYMKQNPDEIIMVQGGGSGVGLAQVAAGSFQIGNSDIFAEEK 87 Query: 111 XXXXXXXXXXXXVDHQVAVVAIAAVSHPDAGVDSLTKQQLVDIFTGKVTNWKEVGGKDQK 170 +DH+VAV+ A + + V +LT+Q+L+DIFTGK+TNWKEVGG+DQK Sbjct: 88 SGIAVDKI----IDHKVAVIGFAPIINKKLKVSNLTQQELIDIFTGKITNWKEVGGQDQK 143 Query: 171 IQIINRPSSSGTRATFEGFALGTKTEDLQGSIQEDSSGTVKKMIGETPGAIGYLALSYLD 230 I +I R + SGTR F+ +AL TE + G Q D+SG+V +++G+TPGAI Y+A SY + Sbjct: 144 ITVIGRTAGSGTRVNFDKYALNGATE-VNGPTQ-DASGSVVQLVGQTPGAISYVAFSYTN 201 Query: 231 D-SVKTLKYDGVEPSVDNVVSGKYPVWAYEHMYTN-GEPNEIVKAFLDYI 278 VK + DGVEP+ DNV + + +W+YEHMYTN N I F++Y+ Sbjct: 202 KPGVKAVNVDGVEPTYDNVKTNAWKIWSYEHMYTNKSRKNTIENKFIEYV 251 >MTH1727 [P] COG0226 ABC-type phosphate transport system, periplasmic component Length = 268 Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 9/230 (3%), Positives = 40/230 (17%), Gaps = 7/230 (3%) Query: 55 GSTALQPLVEQVAEKFMETNKDVDIQVQGGGSGTGLTQVAEKQVDIGNSDVFXXXXXXXX 114 ++ +V + E DI +V ++ + Sbjct: 36 SIFGVKRIVIYHDDADGEARFIRDILTYMDTPQYLRRKVFPIMRELKHV-------GILP 88 Query: 115 XXXXXXXXVDHQVAVVAIAAVSHPDAGVDSLTKQQLVDIFTGKVTNWKEVGGKDQKIQII 174 V ++ +L + + + +++ Sbjct: 89 PLRTPHHPTGKPVTGEYRQGLTVKRVKKGTLVDIGADKLALCREKLTVNRIMSFRVVRLG 148 Query: 175 NRPSSSGTRATFEGFALGTKTEDLQGSIQEDSSGTVKKMIGETPGAIGYLALSYLDDSVK 234 + + + G + + L + ++ Sbjct: 149 KEILIEPDEPEDRYWGYEVLDTRRNLAESLKTVGADVVVATSRNASPITSILDEVKTRMR 208 Query: 235 TLKYDGVEPSVDNVVSGKYPVWAYEHMYTNGEPNEIVKAFLDYIMTPEVQ 284 + + + + + + Sbjct: 209 GAREAAILFGGPYKGLPEIDADIWVNTLPGQCTETVRTEEAVLATLSVFN 258 >MTH1728 [P] COG0226 ABC-type phosphate transport system, periplasmic component Length = 268 Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 7/240 (2%), Positives = 39/240 (16%), Gaps = 18/240 (7%) Query: 51 ILASGSTALQPLVEQVAEKFMETNKDVDIQVQGGGSGTGLTQVAEKQVDIGNSDVFXXXX 110 + + A+ +D+ + +++ Sbjct: 34 AASIFGVKRIVIYHDDADGEARFIRDILTYMDTPQYLRRKVFPIMRELKHVGI------- 86 Query: 111 XXXXXXXXXXXXVDHQVAVVA----IAAVSHPDAGVDSLTKQQLVDIFTGKVTNWKEVGG 166 + + + + K+T + + Sbjct: 87 ---LPPLRTPHHPTGKPVTGEYRQGLTVKRVKKG-TLVDIGADKLALCREKLTVNRIMSF 142 Query: 167 KDQKIQIINRPSSSGTRATFEGFALGTKTEDLQG-SIQEDSSGTVKKMIGETPGAIGYLA 225 + ++ + G+ + + V I + Sbjct: 143 RVVRLGKEILIEPDEPEDRYWGYEV--LDTRRNLAESLKTVGADVVVATSRNASPITSIL 200 Query: 226 LSYLDDSVKTLKYDGVEPSVDNVVSGKYPVWAYEHMYTNGEPNEIVKAFLDYIMTPEVQT 285 + + + + + + ++ Sbjct: 201 DEVKTRMRGAREAAILFGGPYKGLPEIDADIWVNTLPGQCTETVRTEEAVLATLSVFNML 260 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.315 0.133 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 19,499,217 Number of extensions: 753291 Number of successful extensions: 1733 Number of sequences better than 1.0e-05: 27 Number of HSP's gapped: 1707 Number of HSP's successfully gapped: 28 Length of query: 323 Length of database: 38,378,431 Length adjustment: 107 Effective length of query: 216 Effective length of database: 26,037,693 Effective search space: 5624141688 Effective search space used: 5624141688 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 116 (49.3 bits)