BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0523.0032.p
         (107 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAC1422 [R] COG1253 Hemolysins and related proteins containing C...    79   2e-15
BS_yrkA [R] COG1253 Hemolysins and related proteins containing C...    75   2e-14
BS_yhdP [R] COG1253 Hemolysins and related proteins containing C...    70   6e-13
BB0059 [R] COG1253 Hemolysins and related proteins containing CB...    70   7e-13
BS_yqhB [R] COG1253 Hemolysins and related proteins containing C...    65   2e-11

>CAC1422 [R] COG1253 Hemolysins and related proteins containing CBS domains
          Length = 428

 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 1/95 (1%)

Query: 1   MEEIVGEIQDEFDEERPGVEKLGEDEFSIDGLMLIEEINDRLGLNMETDDYDTIGGWLYS 60
           +EEIVGEIQDEFDEE   + K     + +DG +LIE+IN+ L + +  ++ DTIGGW+YS
Sbjct: 332 LEEIVGEIQDEFDEEMEEIIKTENGSYVVDGKVLIEDINELLDIEIYEENIDTIGGWIYS 391

Query: 61  KLEVNPPQKGQTVEFDSHLFVVEETDNKRISRIKV 95
           KL+   P+  + + + ++ F++ + D +RI +I +
Sbjct: 392 KLK-KYPKTNEKINYGNYQFIILKCDRRRIEKILI 425


>BS_yrkA [R] COG1253 Hemolysins and related proteins containing CBS domains
          Length = 434

 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 67/98 (68%), Gaps = 3/98 (3%)

Query: 1   MEEIVGEIQDEFDE-ERPGVEKLGEDEFSIDGLMLIEEINDRLGLNMETDDYDTIGGWLY 59
           +EEIVGEI+DEFD+ E P + K+ ++ + +D  +LIE++ND LG  + +D+ DTIGGW  
Sbjct: 336 LEEIVGEIRDEFDKDEVPNIRKVNDNHYILDSKVLIEDVNDLLGTTLASDEVDTIGGWFM 395

Query: 60  SKLEVNPPQKGQTVEFDSHLFVVEETDNKRISRIKVMK 97
           ++ +++    G  +E D ++F V ET  + I+ +++++
Sbjct: 396 TQ-QIDAAV-GSVIEADGYIFKVHETVGRHINYLEIVR 431


>BS_yhdP [R] COG1253 Hemolysins and related proteins containing CBS domains
          Length = 444

 Score = 70.5 bits (171), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 68/101 (67%), Gaps = 5/101 (4%)

Query: 1   MEEIVGEIQDEFD-EERPGVEKLGEDEFSIDGLMLIEEINDRLGLNMETDDYDTIGGW-L 58
           +EEIVGEI+DEFD +E   + K+GE  + +DG +LI+++ND LG+++E ++ DTIGGW L
Sbjct: 334 IEEIVGEIRDEFDIDEISEIRKIGEGHYILDGKVLIDQVNDLLGIHLENEEVDTIGGWFL 393

Query: 59  YSKLEVNPPQKGQTVEFDSHLFVVEETDNKRISRIKVMKVQ 99
             K +V   +K  ++  +   F++ E D   ++ I+V K+Q
Sbjct: 394 TQKYDV---EKDDSIIEEGCEFIINEIDGHHVAYIEVKKLQ 431


>BB0059 [R] COG1253 Hemolysins and related proteins containing CBS domains
          Length = 259

 Score = 70.1 bits (170), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 61/95 (64%), Gaps = 1/95 (1%)

Query: 1   MEEIVGEIQDEFDEERPGVEKLGEDEFSIDGLMLIEEINDRLGLNMETDDYDTIGGWLYS 60
           +EEIVG+IQDEFD E   + +L +  +  D  +LIE++N++L LN+   D+DT+GG++Y 
Sbjct: 160 LEEIVGDIQDEFDNELDEIVRLDDGSYLCDARILIEDLNEKLNLNLPNGDFDTLGGFVYD 219

Query: 61  KLEVNPPQKGQTVEFDSHLFVVEETDNKRISRIKV 95
            L    P K + VE+++ +F ++    + I  IK+
Sbjct: 220 -LFGRIPLKNEKVEYNNLVFSIKNMHQRNIKVIKI 253


>BS_yqhB [R] COG1253 Hemolysins and related proteins containing CBS domains
          Length = 294

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 0/100 (0%), Positives = 0/100 (0%), Gaps = 3/100 (3%)

Query: 1   MEEIVGEIQDEFD-EERPGVEKLGEDEFSIDGLMLIEEINDRLGLNMETDDYDTIGGWLY 59
                                                                       
Sbjct: 345                                                              404

Query: 60  SKLEVNPPQKGQTVEFDSHLFVVEETDNKRISRIKVMKVQ 99
                                                   
Sbjct: 405 --                                       442


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.313    0.137    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 8,404,058
Number of extensions: 343086
Number of successful extensions: 591
Number of sequences better than 1.0e-05: 32
Number of HSP's gapped: 585
Number of HSP's successfully gapped: 32
Length of query: 107
Length of database: 38,378,431
Length adjustment: 75
Effective length of query: 32
Effective length of database: 29,728,381
Effective search space: 951308192
Effective search space used: 951308192
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 109 (46.6 bits)