BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0523.0019.p
         (55 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VC1745 [C] COG1012 NAD-dependent aldehyde dehydrogenases               60   9e-10
AGl1228 [C] COG1012 NAD-dependent aldehyde dehydrogenases              59   1e-09
RSc0028 [C] COG1012 NAD-dependent aldehyde dehydrogenases              56   1e-08
Cgl0050 [C] COG1012 NAD-dependent aldehyde dehydrogenases              56   1e-08
mll1168 [C] COG1012 NAD-dependent aldehyde dehydrogenases              55   2e-08

>VC1745 [C] COG1012 NAD-dependent aldehyde dehydrogenases
          Length = 488

 Score = 60.1 bits (144), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 28/52 (53%), Positives = 36/52 (69%)

Query: 1   MISGLEAGNIGINGTSLAYLQSPFGGVKESGIGREGGRQGLEEYTVLKYVAM 52
           M   LEAG +GIN   ++   +PFGG+KESG+GREG + GLEEY  +KY  M
Sbjct: 433 MSEALEAGIVGINEGLISTTLAPFGGIKESGLGREGAKHGLEEYLEVKYTLM 484


>AGl1228 [C] COG1012 NAD-dependent aldehyde dehydrogenases
          Length = 134

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 0/49 (0%), Positives = 0/49 (0%)

Query: 4   GLEAGNIGINGTSLAYLQSPFGGVKESGIGREGGRQGLEEYTVLKYVAM 52
                                                            
Sbjct: 432                                                   480


>RSc0028 [C] COG1012 NAD-dependent aldehyde dehydrogenases
          Length = 497

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/49 (48%), Positives = 37/49 (75%)

Query: 4   GLEAGNIGINGTSLAYLQSPFGGVKESGIGREGGRQGLEEYTVLKYVAM 52
            LE+G +G+N   ++  ++PFGGVK+SG+GREG + G++EY  +KYV M
Sbjct: 445 ALESGMVGVNTGLISTAEAPFGGVKQSGLGREGSKYGIDEYLEIKYVCM 493


>Cgl0050 [C] COG1012 NAD-dependent aldehyde dehydrogenases
          Length = 490

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 37/48 (77%)

Query: 3   SGLEAGNIGINGTSLAYLQSPFGGVKESGIGREGGRQGLEEYTVLKYV 50
            GLE G +G+N   ++   +PFGGVK+SG+GREGG +G+EEYT ++Y+
Sbjct: 435 DGLEFGLVGVNSGVISNAAAPFGGVKQSGMGREGGLEGIEEYTSVQYI 482


>mll1168 [C] COG1012 NAD-dependent aldehyde dehydrogenases
          Length = 485

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 38/52 (73%)

Query: 1   MISGLEAGNIGINGTSLAYLQSPFGGVKESGIGREGGRQGLEEYTVLKYVAM 52
           ++ GL+ G +G+N   +   ++PFGGVKESG+G+EGG QG+E+Y   KYV +
Sbjct: 429 VMEGLKYGMVGVNEGLITTPEAPFGGVKESGLGKEGGHQGIEDYLDTKYVCI 480


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.313    0.137    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 4,461,678
Number of extensions: 126608
Number of successful extensions: 302
Number of sequences better than 1.0e-05: 35
Number of HSP's gapped: 307
Number of HSP's successfully gapped: 35
Length of query: 55
Length of database: 38,378,431
Length adjustment: 28
Effective length of query: 27
Effective length of database: 35,149,079
Effective search space: 949025133
Effective search space used: 949025133
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 109 (46.6 bits)