BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0514.0021.p
         (109 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BH3735 [I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl ca...   135   1e-32
BS_ywpB [I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl c...   122   9e-29
RSc1415 [I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl c...   102   1e-22
CC1912 [I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl ca...    96   1e-20
alr2271 [I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl c...    96   2e-20

>BH3735 [I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier
           protein) dehydratases
          Length = 346

 Score =  135 bits (340), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 5/103 (4%), Positives = 19/103 (18%)

Query: 1   VTFNEPYFLGHFSDYPVMPGVLIVEALAQVGGIAMSNVERNNHTIGLLTGIDNCRFKKQV 60
               +   L   ++   +P     + L +           +   + + + +         
Sbjct: 38  YAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDK 97

Query: 61  KPGDQLHLEFEVTRTKGQIVKGTGIATVNNEMVCEAEIMFAFN 103
                  L+ +  R               +             
Sbjct: 98  GIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNC 140


>BS_ywpB [I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier
           protein) dehydratases
          Length = 346

 Score =  122 bits (307), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 5/91 (5%), Positives = 19/91 (20%)

Query: 1   VTFNEPYFLGHFSDYPVMPGVLIVEALAQVGGIAMSNVERNNHTIGLLTGIDNCRFKKQV 60
               +   L   ++   +P     + L +           +   + + + +         
Sbjct: 38  YAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDK 97

Query: 61  KPGDQLHLEFEVTRTKGQIVKGTGIATVNNE 91
                  L+ +  R               + 
Sbjct: 98  GIRPDQALDRKNIREALHDSLKRLQTDYLDL 128


>RSc1415 [I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier
           protein) dehydratases
          Length = 346

 Score =  102 bits (254), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 9/104 (8%), Positives = 21/104 (20%), Gaps = 3/104 (2%)

Query: 1   VTFNEPYFLGHFSDYPVMPGVLIVEALAQVGGIAM---SNVERNNHTIGLLTGIDNCRFK 57
             +  P             G  + +  ++   I     S   RNN          + +  
Sbjct: 51  EMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNI 110

Query: 58  KQVKPGDQLHLEFEVTRTKGQIVKGTGIATVNNEMVCEAEIMFA 101
           ++        L+ +                         +   A
Sbjct: 111 REALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPA 154


>CC1912 [I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier
           protein) dehydratases
          Length = 346

 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 9/100 (9%), Positives = 18/100 (18%), Gaps = 4/100 (4%)

Query: 1   VTFNEPYFLGHFSDYPVMPGVLIVEALAQVGGIAMSN---VERNNHTIGLLTGIDNCRFK 57
           V    P      +       V    A        +        + +    +   D    +
Sbjct: 49  VAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIR-PDQALDR 107

Query: 58  KQVKPGDQLHLEFEVTRTKGQIVKGTGIATVNNEMVCEAE 97
           K ++      L+   T               N        
Sbjct: 108 KNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYS 147


>alr2271 [I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier
           protein) dehydratases
          Length = 346

 Score = 95.5 bits (236), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 5/103 (4%), Positives = 16/103 (15%), Gaps = 1/103 (0%)

Query: 1   VTFNEPYFLGHFSDYPVMPGVLIVEALAQVGGIAMSNVERNNHTIGLLTGIDNCRFKKQV 60
                        +  ++   +   +     GI         +    L           +
Sbjct: 67  TYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYL 126

Query: 61  KPGDQLHLEFEVTRTKGQIV-KGTGIATVNNEMVCEAEIMFAF 102
                   +                   V+     +A   +  
Sbjct: 127 DLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQR 169


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.321    0.138    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 7,996,314
Number of extensions: 310368
Number of successful extensions: 2209
Number of sequences better than 1.0e-05: 23
Number of HSP's gapped: 2193
Number of HSP's successfully gapped: 23
Length of query: 109
Length of database: 38,378,431
Length adjustment: 77
Effective length of query: 32
Effective length of database: 29,497,713
Effective search space: 943926816
Effective search space used: 943926816
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 109 (46.6 bits)