BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0510.0011.p
         (221 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BH2127 [M] COG3764 Sortase (surface protein transpeptidase)           144   2e-34
BH2015 [M] COG3764 Sortase (surface protein transpeptidase)            73   4e-13
BH0362 [M] COG3764 Sortase (surface protein transpeptidase)            72   7e-13
BH3596 [M] COG3764 Sortase (surface protein transpeptidase)            60   3e-09
L125196 [M] COG3764 Sortase (surface protein transpeptidase)           57   2e-08

>BH2127 [M] COG3764 Sortase (surface protein transpeptidase)
          Length = 346

 Score =  144 bits (362), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 13/213 (6%), Positives = 34/213 (15%), Gaps = 31/213 (14%)

Query: 10  LIILAGILLMLYPK-ANEWYNDWXXXXXXXXXXXXYSEISPSPSPQSDLHKQYAEVTQLL 68
              L    L L      E  ++                        +     YA    + 
Sbjct: 8   HSSLEVSTLGLGTMTFGEQNSEA----------------------DAHAQLDYAVAQGIN 45

Query: 69  AEESSEGDLAKATEAPAPEIKLGGKITGIIQIDKINLKLPVLEGXXXXXXXXXXXXXXET 128
             + +E                  +      +     K    E               + 
Sbjct: 46  LIDVAEMYPVPPRPET--------QGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDK 97

Query: 129 AAIGQVGNAAIAAHRSRTAGRLFNRLNEVEVGDTISVQTKEQDYQYVVYDISIVEPTDVS 188
                          +        + + +++      Q     +  + Y  +   P    
Sbjct: 98  GIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSL 157

Query: 189 VLNGHNDDKILTLITCDPLVNPTHRLIIHARLS 221
           +       +         +           R  
Sbjct: 158 LDTLDALAEYQRAGKIRYIGVSNETAFGVMRYL 190


>BH2015 [M] COG3764 Sortase (surface protein transpeptidase)
          Length = 346

 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 8/107 (7%), Positives = 13/107 (12%), Gaps = 1/107 (0%)

Query: 98  IQIDKINLKLPVLEGXXXXXXXXXXXXXXETAAIGQVGNAAIAAHRSRTAGRLFNRLNEV 157
                  L                         I     A    +          RL   
Sbjct: 66  ETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRP-DQALDRKNIREALHDSLKRLQTD 124

Query: 158 EVGDTISVQTKEQDYQYVVYDISIVEPTDVSVLNGHNDDKILTLITC 204
            +        +     +     S  +      L    D         
Sbjct: 125 YLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAG 171


>BH0362 [M] COG3764 Sortase (surface protein transpeptidase)
          Length = 346

 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 8/107 (7%), Positives = 13/107 (12%), Gaps = 1/107 (0%)

Query: 98  IQIDKINLKLPVLEGXXXXXXXXXXXXXXETAAIGQVGNAAIAAHRSRTAGRLFNRLNEV 157
                  L                         I     A    +          RL   
Sbjct: 66  ETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRP-DQALDRKNIREALHDSLKRLQTD 124

Query: 158 EVGDTISVQTKEQDYQYVVYDISIVEPTDVSVLNGHNDDKILTLITC 204
            +        +     +     S  +      L    D         
Sbjct: 125 YLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAG 171


>BH3596 [M] COG3764 Sortase (surface protein transpeptidase)
          Length = 346

 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 2/131 (1%), Positives = 17/131 (12%), Gaps = 7/131 (5%)

Query: 92  GKITGIIQIDKINLKLPVLEGXXXXXXXXXXXXXXETAAIGQVGNAAIAAHRSRTAGRLF 151
            +       +          G                     +        ++       
Sbjct: 57  PRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNI----RE 112

Query: 152 NRLNEVEVGDTISVQTKEQDYQYVVYDISIVEPTDVSVLNGHNDDKILTLITCDP---LV 208
              + ++   T  +   +  +     +         +                +      
Sbjct: 113 ALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGK 172

Query: 209 NPTHRLIIHAR 219
                +     
Sbjct: 173 IRYIGVSNETA 183


>L125196 [M] COG3764 Sortase (surface protein transpeptidase)
          Length = 346

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 6/131 (4%), Positives = 15/131 (11%), Gaps = 6/131 (4%)

Query: 94  ITGIIQIDKINLKLPVLEGXXXXXXXXXXXXXXETAAIGQVGNAAIAAHR----SRTAGR 149
                  +                                     I              
Sbjct: 132 HWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAG-KIRYIGVSNETAFGVMRYL 190

Query: 150 LFNRLNEVEVGDTISVQTKEQDYQYVVYDISIVEPTDVSVLNGHNDDKILTLITCDPLVN 209
                +++    TI       +  + V    + +   V +L                   
Sbjct: 191 HLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLN-GA 249

Query: 210 PTHRLIIHARL 220
                      
Sbjct: 250 KPAGARNTLFS 260


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.316    0.135    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 13,443,888
Number of extensions: 443362
Number of successful extensions: 5566
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 5564
Number of HSP's successfully gapped: 11
Length of query: 221
Length of database: 38,378,431
Length adjustment: 102
Effective length of query: 119
Effective length of database: 26,614,363
Effective search space: 3167109197
Effective search space used: 3167109197
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 114 (48.5 bits)