BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0502.0021.p
         (113 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGl1007 [G] COG1082 Sugar phosphate isomerases/epimerases             170   4e-43
SMb21596 [G] COG1082 Sugar phosphate isomerases/epimerases            169   8e-43
mll1509 [G] COG1082 Sugar phosphate isomerases/epimerases             155   1e-38

>AGl1007 [G] COG1082 Sugar phosphate isomerases/epimerases
          Length = 134

 Score =  170 bits (431), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 0/112 (0%), Positives = 0/112 (0%), Gaps = 1/112 (0%)

Query: 1   MVALIDPIPQLRKWTDKIFHVHGKDATIAWDIVREYGIHGPQPYVWHRTPGFGDTNWTDV 60
                                                                       
Sbjct: 189                                                              248

Query: 61  ISILRQGGYXXXXXDIEGWHDPVYRDELEMTGQVHALNYLKHCRGGSFIPNP 112
                                                               
Sbjct: 249 -                                                    299


>SMb21596 [G] COG1082 Sugar phosphate isomerases/epimerases
          Length = 300

 Score =  169 bits (428), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 79/112 (70%), Positives = 92/112 (82%), Gaps = 1/112 (0%)

Query: 1   MVALIDPIPQLRKWTDKIFHVHGKDATIAWDIVREYGIHGPQPYVWHRTPGFGDTNWTDV 60
           MV LIDP+PQ+RKW  KIFHVHGKDATI WD++RE+GI G + +V+ RTPGFGD+NWTD+
Sbjct: 189 MVYLIDPLPQIRKWAPKIFHVHGKDATIRWDVIREHGIFGKEKFVFMRTPGFGDSNWTDI 248

Query: 61  ISILRQGGYXXXXXDIEGWHDPVYRDELEMTGQVHALNYLKHCRGGSFIPNP 112
           IS LR  G+     DIEGWHDPVYRD LEMTGQVHALNYLK CRGG F+ +P
Sbjct: 249 ISELRLAGW-SGSIDIEGWHDPVYRDALEMTGQVHALNYLKGCRGGDFVADP 299


>mll1509 [G] COG1082 Sugar phosphate isomerases/epimerases
          Length = 301

 Score =  155 bits (392), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 2/113 (1%), Positives = 12/113 (10%), Gaps = 2/113 (1%)

Query: 1   MVALIDPIPQLRKWTDKIFHVHGKDATIAWDIVREYGIHGPQPYVWHRTPGFGDTNWTDV 60
              +   I + +        +           V           +               
Sbjct: 190 QRFMASEIIREKLMRFLGAELPYSVTVEIERFVSNERGGYDINGLILVEREGQKKMVIGN 249

Query: 61  ISILRQGGYXXXXXDIEGWHDPVYRDELEMTGQVHALNYLKHCRGG-SFIPNP 112
                +                                  +       ++ + 
Sbjct: 250 KGAKIKTIG-IEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSLGYVDDL 301


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.323    0.145    0.504 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 10,165,943
Number of extensions: 422471
Number of successful extensions: 489
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 487
Number of HSP's successfully gapped: 3
Length of query: 113
Length of database: 38,378,431
Length adjustment: 80
Effective length of query: 33
Effective length of database: 29,151,711
Effective search space: 962006463
Effective search space used: 962006463
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 109 (46.6 bits)