BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0500.0013.p (177 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BS_ylnC [P] COG0529 Adenylylsulfate kinase and related kinases 167 1e-41 BH1489 [P] COG0529 Adenylylsulfate kinase and related kinases 159 2e-39 SMb21224_2 [P] COG0529 Adenylylsulfate kinase and related kinases 155 3e-38 SMa0857_2 [P] COG0529 Adenylylsulfate kinase and related kinases 152 2e-37 BS_yisZ [P] COG0529 Adenylylsulfate kinase and related kinases 150 1e-36 >BS_ylnC [P] COG0529 Adenylylsulfate kinase and related kinases Length = 197 Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 82/167 (49%), Positives = 107/167 (64%), Gaps = 2/167 (1%) Query: 9 LWLTGLSGAGKSTVAALVTDRLRAAGQAVEWLDGDELRRSIGRGLGFSREDRFENIRRAV 68 LWLTGLSG+GKST+A L G V LDGD +R + R LGFS EDR ENIRR Sbjct: 29 LWLTGLSGSGKSTIANAAARELFEQGYQVIVLDGDNIRHGLNRDLGFSDEDRKENIRRIG 88 Query: 69 YVAELLNRHGVITVISLISPYAEMRSHARQQLPG--FVEVYVNCPLEICEARDVKGLYAK 126 VA+L + G I + + ISP+ E R R+ + F EVY+ C L+ICE RD KGLY K Sbjct: 89 EVAKLFVQQGTIVITAFISPFREDRQQVRELVEAGEFNEVYIKCDLDICEQRDPKGLYKK 148 Query: 127 ARRGELPSFTGISDPYEAPASPELTLYTAKHPPEDCADELLAWLEKR 173 AR GE+P FTGI PYE P +PEL L + +H E C ++L+ +++++ Sbjct: 149 ARNGEIPFFTGIDSPYEEPEAPELVLDSGQHDREACKNQLIEFVKQK 195 >BH1489 [P] COG0529 Adenylylsulfate kinase and related kinases Length = 202 Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 82/172 (47%), Positives = 108/172 (62%), Gaps = 2/172 (1%) Query: 5 RGITLWLTGLSGAGKSTVAALVTDRLRAAGQAVEWLDGDELRRSIGRGLGFSREDRFENI 64 + +W TGLSG+GKST+A + +L G LDGD +R + GLGFS EDR ENI Sbjct: 28 KSCVVWFTGLSGSGKSTLANALDRKLFEEGIHSYVLDGDNIRHGLNAGLGFSEEDRKENI 87 Query: 65 RRAVYVAELLNRHGVITVISLISPYAEMRSHARQQLPG--FVEVYVNCPLEICEARDVKG 122 RR VA+L GV+T + ISP+ E R + R L F+EVYV CPLE CE RD KG Sbjct: 88 RRIGEVAKLFVDAGVVTSTAFISPFREDRDNVRGILDDGEFIEVYVRCPLETCEKRDPKG 147 Query: 123 LYAKARRGELPSFTGISDPYEAPASPELTLYTAKHPPEDCADELLAWLEKRQ 174 LY KAR G++P FTGIS PYE P +PEL + T + E+ +++ A+L ++ Sbjct: 148 LYKKARSGDIPEFTGISSPYEEPVNPELIIDTDQLAVEEAVEKIYAYLHAQE 199 >SMb21224_2 [P] COG0529 Adenylylsulfate kinase and related kinases Length = 203 Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 77/171 (45%), Positives = 109/171 (63%), Gaps = 2/171 (1%) Query: 8 TLWLTGLSGAGKSTVAALVTDRLRAAGQAVEWLDGDELRRSIGRGLGFSREDRFENIRRA 67 LW TGLSG+GKST+A + L A G+ LDGD +R + R LGF+ EDR ENIRR Sbjct: 32 VLWFTGLSGSGKSTIANELDRILHAQGKHTYLLDGDNVRHGLNRDLGFTEEDRVENIRRV 91 Query: 68 VYVAELLNRHGVITVISLISPYAEMRSHARQQLP--GFVEVYVNCPLEICEARDVKGLYA 125 VA+L+ G+I ++S ISP+ + R AR+ + F+E++V+ PL+ C RD KGLY Sbjct: 92 AEVAKLMADAGLIVLVSFISPFRDERRMARELMEEGEFIEIFVDTPLDECARRDPKGLYE 151 Query: 126 KARRGELPSFTGISDPYEAPASPELTLYTAKHPPEDCADELLAWLEKRQQQ 176 KA G++ +FTG+S PYE P +PEL + T H P D A + +L++R + Sbjct: 152 KALAGKIANFTGVSSPYEPPENPELHIRTVGHEPTDLALAIEEFLDRRMED 202 >SMa0857_2 [P] COG0529 Adenylylsulfate kinase and related kinases Length = 211 Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 77/168 (45%), Positives = 108/168 (64%), Gaps = 2/168 (1%) Query: 8 TLWLTGLSGAGKSTVAALVTDRLRAAGQAVEWLDGDELRRSIGRGLGFSREDRFENIRRA 67 LW TGLSG+GKST+A + L A G+ LDGD +R + R LGF+ EDR ENIRR Sbjct: 32 VLWFTGLSGSGKSTIANELDRILHAQGKHTYLLDGDNVRHGLNRDLGFTEEDRVENIRRV 91 Query: 68 VYVAELLNRHGVITVISLISPYAEMRSHARQQLP--GFVEVYVNCPLEICEARDVKGLYA 125 VA+L+ G+I ++S ISP+ + R AR+ + F+E++V+ PL+ C RD KGLY Sbjct: 92 AEVAKLMADAGLIVLVSFISPFRDERRMARELMEEGEFIEIFVDTPLDECARRDPKGLYE 151 Query: 126 KARRGELPSFTGISDPYEAPASPELTLYTAKHPPEDCADELLAWLEKR 173 KA G++ +FTG+S YEAP +PEL + T H P D A + +L++R Sbjct: 152 KALAGKIANFTGVSSCYEAPENPELHIRTVGHQPNDLALAIEEFLDRR 199 >BS_yisZ [P] COG0529 Adenylylsulfate kinase and related kinases Length = 199 Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 76/175 (43%), Positives = 102/175 (58%), Gaps = 2/175 (1%) Query: 1 MSVNRGITLWLTGLSGAGKSTVAALVTDRLRAAGQAVEWLDGDELRRSIGRGLGFSREDR 60 ++ ++ LW TGLSG+GKS +A V ++L G LDGD +R + + LGF DR Sbjct: 22 LNGHKSCVLWFTGLSGSGKSVLANAVDEKLYRKGIQSYVLDGDNIRHGLNKDLGFQTGDR 81 Query: 61 FENIRRAVYVAELLNRHGVITVISLISPYAEMRSHARQQLPG--FVEVYVNCPLEICEAR 118 ENIRR VA+L G + + + ISP+ E R R P F E+YV CPL +CE R Sbjct: 82 IENIRRIGEVAKLFVDSGQMILTAFISPFREDRDMVRALFPKGEFFEIYVKCPLHVCEQR 141 Query: 119 DVKGLYAKARRGELPSFTGISDPYEAPASPELTLYTAKHPPEDCADELLAWLEKR 173 D KGLY KAR GE+ FTGI PYEAP SP+ + + + D AD ++ L+ R Sbjct: 142 DPKGLYKKARNGEIKHFTGIDSPYEAPLSPDFIIESDQTSISDGADLIINALQNR 196 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.319 0.136 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 14,055,553 Number of extensions: 597710 Number of successful extensions: 3296 Number of sequences better than 1.0e-05: 10 Number of HSP's gapped: 3293 Number of HSP's successfully gapped: 10 Length of query: 177 Length of database: 38,378,431 Length adjustment: 99 Effective length of query: 78 Effective length of database: 26,960,365 Effective search space: 2102908470 Effective search space used: 2102908470 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 112 (47.8 bits)