BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0486.0012.p (503 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value FN1166 [G] COG1129 ABC-type sugar transport system, ATPase compo... 590 e-168 ZmglA [G] COG1129 ABC-type sugar transport system, ATPase component 585 e-167 mglA [G] COG1129 ABC-type sugar transport system, ATPase component 585 e-167 ECs3041 [G] COG1129 ABC-type sugar transport system, ATPase comp... 585 e-167 YPO1508 [G] COG1129 ABC-type sugar transport system, ATPase comp... 584 e-166 >FN1166 [G] COG1129 ABC-type sugar transport system, ATPase component Length = 500 Score = 590 bits (1522), Expect = e-168, Method: Compositional matrix adjust. Identities = 288/503 (57%), Positives = 382/503 (75%), Gaps = 4/503 (0%) Query: 1 MAKSQFLLEMNNITKEFPGVKALDGVSLKVRPGSVHALMGENGAGKSTLMKCLFGIYSPD 60 M +++LEM NI+KEFPGVKALD V LK++PG+VHALMGENGAGKSTLMKCLFGIY + Sbjct: 1 MENLKYVLEMENISKEFPGVKALDDVQLKLKPGTVHALMGENGAGKSTLMKCLFGIYEKN 60 Query: 61 AGEIYLDGEKASITNSNDALGHGISMIHQELHPVPFRNVMENIWLGRFPTKGFGPLQFID 120 +G+I LDG + + ++ +AL +G+SM+HQEL+ V RNV++NIWLGR+P KGF F+D Sbjct: 61 SGKILLDGVEVNFKSTKEALENGVSMVHQELNQVLQRNVLDNIWLGRYPMKGF----FVD 116 Query: 121 HKKMFTDTENLFKDLDIDLHPETLVGKLSVSKIQSIEIAKAVSFHSRVIVMDEPTSSLTS 180 KKM+ DT N+FKDLDI + P V L +++ Q IEIAKAVS+ S+VIVMDEPTSSLT Sbjct: 117 EKKMYNDTINIFKDLDIKVDPRKKVADLPIAERQMIEIAKAVSYKSKVIVMDEPTSSLTE 176 Query: 181 VEVEHLFRIIRDLQKRGVAIIYISHKMEEILEISDEVTIMRDGKKIGTWPSAELTTDLII 240 EV+HLFRII+ L++ GV IIYISHKMEEI ISDE+TI+RDGK I T ++++T+ II Sbjct: 177 KEVDHLFRIIKKLKESGVGIIYISHKMEEIKMISDEITILRDGKWISTNDVSKISTEQII 236 Query: 241 SRMVGRDLTNRFPERQNVPGEVFLKVEGLTSTEPRSFKDVSFELRRGEILGVGGLVGAQR 300 S MVGRDLT RFP++ N E+ L+V+ LT+ S +DVSFEL +GEILG+ GLVG++R Sbjct: 237 SMMVGRDLTERFPKKDNKAKEMILEVKNLTALNQPSIQDVSFELYKGEILGIAGLVGSKR 296 Query: 301 TEVIEALFGLRXXXXXXXXXXXXXVNIQSPQDAKRHGLALLTEERRVTGIFPVLSVHENG 360 TE++E +FG+R V +SP+DA ++G AL+TEERR TGIF +L V N Sbjct: 297 TEIVETIFGMRPKKHGEIILNGKTVKNKSPEDAIKNGFALVTEERRSTGIFSMLDVAFNS 356 Query: 361 AIANLDHYKTPYFLLDGKKKKAEVDKMIEKLRTKTPTTKTQIMNLSGGNQQKVLLARWLL 420 I+NLD YK + LL K + + +++ +R KTP+ T+I +LSGGNQQKV++ RWLL Sbjct: 357 VISNLDRYKNKFRLLKNKDIEKDTKWIVDSMRVKTPSYSTKIGSLSGGNQQKVIIGRWLL 416 Query: 421 TEPEVLLLDEPTRGIDVGAKFEIYSIIADLAKQGKSIIMISSEMPELLGMSDRVMVMSEG 480 TEPEVL+LDEPTRGIDV AK+EIY ++ DLAK+ K IIMISSEMPELLG++DR++VMS G Sbjct: 417 TEPEVLMLDEPTRGIDVLAKYEIYQLMIDLAKKDKGIIMISSEMPELLGVTDRILVMSNG 476 Query: 481 RLTGILEGDQATETEVMRLAAQH 503 R+ GI++ + + E+M L+A++ Sbjct: 477 RVAGIVKTSETNQEEIMELSAKY 499 >ZmglA [G] COG1129 ABC-type sugar transport system, ATPase component Length = 506 Score = 585 bits (1508), Expect = e-167, Method: Compositional matrix adjust. Identities = 279/502 (55%), Positives = 375/502 (74%), Gaps = 4/502 (0%) Query: 2 AKSQFLLEMNNITKEFPGVKALDGVSLKVRPGSVHALMGENGAGKSTLMKCLFGIYSPDA 61 + ++LLEM+ I K FPGVKALD V+LKVRP S+HALMGENGAGKSTL+KCLFGIY D+ Sbjct: 8 SSGEYLLEMSGINKSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYKKDS 67 Query: 62 GEIYLDGEKASITNSNDALGHGISMIHQELHPVPFRNVMENIWLGRFPTKGFGPLQFIDH 121 G I G++ ++ +AL +GISM+HQEL+ V R+VM+N+WLGR+PTKG F+D Sbjct: 68 GTILFQGKEIDFHSAKEALENGISMVHQELNLVLQRSVMDNMWLGRYPTKGM----FVDQ 123 Query: 122 KKMFTDTENLFKDLDIDLHPETLVGKLSVSKIQSIEIAKAVSFHSRVIVMDEPTSSLTSV 181 KM+ +T+ +F +LDID+ P VG LSVS++Q IEIAKA S+++++++MDEPTSSLT Sbjct: 124 DKMYRETKAIFDELDIDIDPRARVGTLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEK 183 Query: 182 EVEHLFRIIRDLQKRGVAIIYISHKMEEILEISDEVTIMRDGKKIGTWPSAELTTDLIIS 241 EV HLF IIR L++RG I+YISHKMEEI ++ DEVT++RDG+ I T P A LT D II+ Sbjct: 184 EVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEVTVLRDGQWIATEPLAGLTMDKIIA 243 Query: 242 RMVGRDLTNRFPERQNVPGEVFLKVEGLTSTEPRSFKDVSFELRRGEILGVGGLVGAQRT 301 MVGR L RFP+++N PGEV L+V LTS S +DVSF+L +GEILG+ GLVGA+RT Sbjct: 244 MMVGRSLNQRFPDKENKPGEVILEVRNLTSLRQPSIRDVSFDLHKGEILGIAGLVGAKRT 303 Query: 302 EVIEALFGLRXXXXXXXXXXXXXVNIQSPQDAKRHGLALLTEERRVTGIFPVLSVHENGA 361 +++E LFG+R +N + +A HG AL+TEERR TGI+ L + N Sbjct: 304 DIVETLFGIREKSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSL 363 Query: 362 IANLDHYKTPYFLLDGKKKKAEVDKMIEKLRTKTPTTKTQIMNLSGGNQQKVLLARWLLT 421 I+N+ +YK LLD + K++ +I+ +R KTP +TQI +LSGGNQQKV++ RWLLT Sbjct: 364 ISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQIGSLSGGNQQKVIIGRWLLT 423 Query: 422 EPEVLLLDEPTRGIDVGAKFEIYSIIADLAKQGKSIIMISSEMPELLGMSDRVMVMSEGR 481 +PE+L+ DEPTRGIDVGAKFEIY +IA+LAK+GK II+ISSEMPELLG++DR++VMS G Sbjct: 424 QPEILMXDEPTRGIDVGAKFEIYQLIAELAKKGKGIIIISSEMPELLGITDRILVMSNGL 483 Query: 482 LTGILEGDQATETEVMRLAAQH 503 ++GI++ T+ E++RLA+ H Sbjct: 484 VSGIVDTKTTTQNEILRLASLH 505 >mglA [G] COG1129 ABC-type sugar transport system, ATPase component Length = 506 Score = 585 bits (1508), Expect = e-167, Method: Compositional matrix adjust. Identities = 280/502 (55%), Positives = 376/502 (74%), Gaps = 4/502 (0%) Query: 2 AKSQFLLEMNNITKEFPGVKALDGVSLKVRPGSVHALMGENGAGKSTLMKCLFGIYSPDA 61 + ++LLEM+ I K FPGVKALD V+LKVRP S+HALMGENGAGKSTL+KCLFGIY D+ Sbjct: 8 SSGEYLLEMSGINKSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDS 67 Query: 62 GEIYLDGEKASITNSNDALGHGISMIHQELHPVPFRNVMENIWLGRFPTKGFGPLQFIDH 121 G I G++ ++ +AL +GISM+HQEL+ V R+VM+N+WLGR+PTKG F+D Sbjct: 68 GTILFQGKEIDFHSAKEALENGISMVHQELNLVLQRSVMDNMWLGRYPTKGM----FVDQ 123 Query: 122 KKMFTDTENLFKDLDIDLHPETLVGKLSVSKIQSIEIAKAVSFHSRVIVMDEPTSSLTSV 181 KM+ +T+ +F +LDID+ P VG LSVS++Q IEIAKA S+++++++MDEPTSSLT Sbjct: 124 DKMYRETKAIFDELDIDIDPRARVGTLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEK 183 Query: 182 EVEHLFRIIRDLQKRGVAIIYISHKMEEILEISDEVTIMRDGKKIGTWPSAELTTDLIIS 241 EV HLF IIR L++RG I+YISHKMEEI ++ DEVT++RDG+ I T P A LT D II+ Sbjct: 184 EVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEVTVLRDGQWIATEPLAGLTMDKIIA 243 Query: 242 RMVGRDLTNRFPERQNVPGEVFLKVEGLTSTEPRSFKDVSFELRRGEILGVGGLVGAQRT 301 MVGR L RFP+++N PGEV L+V LTS S +DVSF+L +GEILG+ GLVGA+RT Sbjct: 244 MMVGRSLNQRFPDKENKPGEVILEVRNLTSLRQPSIRDVSFDLHKGEILGIAGLVGAKRT 303 Query: 302 EVIEALFGLRXXXXXXXXXXXXXVNIQSPQDAKRHGLALLTEERRVTGIFPVLSVHENGA 361 +++E LFG+R +N + +A HG AL+TEERR TGI+ L + N Sbjct: 304 DIVETLFGIREKSAGTITLHGKQINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSL 363 Query: 362 IANLDHYKTPYFLLDGKKKKAEVDKMIEKLRTKTPTTKTQIMNLSGGNQQKVLLARWLLT 421 I+N+ +YK LLD + K++ +I+ +R KTP +TQI +LSGGNQQKV++ RWLLT Sbjct: 364 ISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQIGSLSGGNQQKVIIGRWLLT 423 Query: 422 EPEVLLLDEPTRGIDVGAKFEIYSIIADLAKQGKSIIMISSEMPELLGMSDRVMVMSEGR 481 +PE+L+LDEPTRGIDVGAKFEIY +IA+LAK+GK II+ISSEMPELLG++DR++VMS G Sbjct: 424 QPEILMLDEPTRGIDVGAKFEIYQLIAELAKKGKGIIIISSEMPELLGITDRILVMSNGL 483 Query: 482 LTGILEGDQATETEVMRLAAQH 503 ++GI++ T+ E++RLA+ H Sbjct: 484 VSGIVDTKTTTQNEILRLASLH 505 >ECs3041 [G] COG1129 ABC-type sugar transport system, ATPase component Length = 506 Score = 585 bits (1507), Expect = e-167, Method: Compositional matrix adjust. Identities = 280/502 (55%), Positives = 376/502 (74%), Gaps = 4/502 (0%) Query: 2 AKSQFLLEMNNITKEFPGVKALDGVSLKVRPGSVHALMGENGAGKSTLMKCLFGIYSPDA 61 + ++LLEM+ I K FPGVKALD V+LKVRP S+HALMGENGAGKSTL+KCLFGIY D+ Sbjct: 8 SSGEYLLEMSGINKSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYKKDS 67 Query: 62 GEIYLDGEKASITNSNDALGHGISMIHQELHPVPFRNVMENIWLGRFPTKGFGPLQFIDH 121 G I G++ ++ +AL +GISM+HQEL+ V R+VM+N+WLGR+PTKG F+D Sbjct: 68 GTILFQGKEIDFHSAKEALENGISMVHQELNLVLQRSVMDNMWLGRYPTKGM----FVDQ 123 Query: 122 KKMFTDTENLFKDLDIDLHPETLVGKLSVSKIQSIEIAKAVSFHSRVIVMDEPTSSLTSV 181 KM+ +T+ +F +LDID+ P VG LSVS++Q IEIAKA S+++++++MDEPTSSLT Sbjct: 124 DKMYRETKAIFDELDIDIDPRARVGTLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEK 183 Query: 182 EVEHLFRIIRDLQKRGVAIIYISHKMEEILEISDEVTIMRDGKKIGTWPSAELTTDLIIS 241 EV HLF IIR L++RG I+YISHKMEEI ++ DEVT++RDG+ I T P A LT D II+ Sbjct: 184 EVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEVTVLRDGQWIATEPLAGLTMDKIIA 243 Query: 242 RMVGRDLTNRFPERQNVPGEVFLKVEGLTSTEPRSFKDVSFELRRGEILGVGGLVGAQRT 301 MVGR L RFP+++N PGEV L+V LTS S +DVSF+L +GEILG+ GLVGA+RT Sbjct: 244 MMVGRSLNQRFPDKENKPGEVILEVRNLTSLRQPSIRDVSFDLHKGEILGIAGLVGAKRT 303 Query: 302 EVIEALFGLRXXXXXXXXXXXXXVNIQSPQDAKRHGLALLTEERRVTGIFPVLSVHENGA 361 +++E LFG+R +N + +A HG AL+TEERR TGI+ L + N Sbjct: 304 DIVETLFGIREKSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSL 363 Query: 362 IANLDHYKTPYFLLDGKKKKAEVDKMIEKLRTKTPTTKTQIMNLSGGNQQKVLLARWLLT 421 I+N+ +YK LLD + K++ +I+ +R KTP +TQI +LSGGNQQKV++ RWLLT Sbjct: 364 ISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQIGSLSGGNQQKVIIGRWLLT 423 Query: 422 EPEVLLLDEPTRGIDVGAKFEIYSIIADLAKQGKSIIMISSEMPELLGMSDRVMVMSEGR 481 +PE+L+LDEPTRGIDVGAKFEIY +IA+LAK+GK II+ISSEMPELLG++DR++VMS G Sbjct: 424 QPEILMLDEPTRGIDVGAKFEIYQLIAELAKKGKGIIIISSEMPELLGITDRILVMSNGL 483 Query: 482 LTGILEGDQATETEVMRLAAQH 503 ++GI++ T+ E++RLA+ H Sbjct: 484 VSGIVDTKTTTQNEILRLASLH 505 >YPO1508 [G] COG1129 ABC-type sugar transport system, ATPase component Length = 506 Score = 584 bits (1505), Expect = e-166, Method: Compositional matrix adjust. Identities = 280/498 (56%), Positives = 371/498 (74%), Gaps = 4/498 (0%) Query: 6 FLLEMNNITKEFPGVKALDGVSLKVRPGSVHALMGENGAGKSTLMKCLFGIYSPDAGEIY 65 +LLEM+NI K FPGVKALD V+LKVRP S+HALMGENGAGKSTL+KCLFGIY D+G I Sbjct: 12 WLLEMSNIDKSFPGVKALDNVNLKVRPYSIHALMGENGAGKSTLLKCLFGIYKKDSGSII 71 Query: 66 LDGEKASITNSNDALGHGISMIHQELHPVPFRNVMENIWLGRFPTKGFGPLQFIDHKKMF 125 G++ +S +AL G+SM+HQEL+ V R VM+N+WLGR+PTKGF F+D KM+ Sbjct: 72 FQGQEIEFKSSKEALEQGVSMVHQELNLVLQRTVMDNMWLGRYPTKGF----FVDQDKMY 127 Query: 126 TDTENLFKDLDIDLHPETLVGKLSVSKIQSIEIAKAVSFHSRVIVMDEPTSSLTSVEVEH 185 +T+ +F +LDID+ P V LSVS++Q IEIAKA S+++++++MDEPTSSLT EV H Sbjct: 128 KETKAIFDELDIDIDPRDKVATLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNH 187 Query: 186 LFRIIRDLQKRGVAIIYISHKMEEILEISDEVTIMRDGKKIGTWPSAELTTDLIISRMVG 245 LF IIR L+ RG I+YISHKMEEI ++ DE+TI+RDG+ I T P LT D IIS MVG Sbjct: 188 LFTIIRKLKARGCGIVYISHKMEEIFQLCDEITILRDGQWITTQPLDGLTMDQIISMMVG 247 Query: 246 RDLTNRFPERQNVPGEVFLKVEGLTSTEPRSFKDVSFELRRGEILGVGGLVGAQRTEVIE 305 R L+ RFP+R N PGEV L+V+ LTS S +DVSF+L +GEILG+ GLVGA+RT+++E Sbjct: 248 RSLSQRFPDRLNKPGEVILEVKNLTSLRQPSIRDVSFDLHKGEILGIAGLVGAKRTDIVE 307 Query: 306 ALFGLRXXXXXXXXXXXXXVNIQSPQDAKRHGLALLTEERRVTGIFPVLSVHENGAIANL 365 LFG+R +N S +A HG AL+TEERR TGI+ L + N I+N+ Sbjct: 308 TLFGIREKVTGTIKLHGKNINNHSANEAINHGFALVTEERRSTGIYAYLDISFNSLISNI 367 Query: 366 DHYKTPYFLLDGKKKKAEVDKMIEKLRTKTPTTKTQIMNLSGGNQQKVLLARWLLTEPEV 425 +YK + LLD + K++ +I+ +R KTP +T I +LSGGNQQKV++ RWLLT+PE+ Sbjct: 368 RNYKNKFGLLDNTRMKSDTQWVIDAMRVKTPGHRTNIGSLSGGNQQKVIIGRWLLTQPEI 427 Query: 426 LLLDEPTRGIDVGAKFEIYSIIADLAKQGKSIIMISSEMPELLGMSDRVMVMSEGRLTGI 485 L+LDEPTRGIDVGAKFEIY ++ +LAK+ K II+ISSEMPELLG++DR++VMS G++ GI Sbjct: 428 LMLDEPTRGIDVGAKFEIYQLMTELAKKDKGIIIISSEMPELLGITDRILVMSNGQVAGI 487 Query: 486 LEGDQATETEVMRLAAQH 503 ++ Q T+ E++RLA+ H Sbjct: 488 VDTKQTTQNEILRLASLH 505 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.318 0.136 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 35,629,515 Number of extensions: 1522358 Number of successful extensions: 22121 Number of sequences better than 1.0e-05: 1973 Number of HSP's gapped: 19251 Number of HSP's successfully gapped: 3354 Length of query: 503 Length of database: 38,378,431 Length adjustment: 111 Effective length of query: 392 Effective length of database: 25,576,357 Effective search space: 10025931944 Effective search space used: 10025931944 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 118 (50.1 bits)