BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0476.0047.p
         (243 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGc3637 [R] COG0627 Predicted esterase                                 64   3e-10
BS_ybbA [R] COG2819 Predicted hydrolase of the alpha/beta superf...    59   6e-09
STM2775 [P] COG2382 Enterochelin esterase and related enzymes          57   3e-08
yieL [P] COG2382 Enterochelin esterase and related enzymes             51   2e-06

>AGc3637 [R] COG0627 Predicted esterase
          Length = 301

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 5/160 (3%), Positives = 24/160 (15%), Gaps = 11/160 (6%)

Query: 7   LKRTIVKQTLWSEHLQEERKLRIYLPPGYNEVLSYPVVYC---QDGEE--FFNFGRIATL 61
           + ++ +   L  + +    +           + +                         +
Sbjct: 19  VGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLM 78

Query: 62  AGQLILEQDIEPFIIV--GVEVNVAVRTQEYAPFGNRFKQYLSCFAEEIIPFIEHNYPVR 119
                        +I                           +     +           
Sbjct: 79  NKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLRE----GKAPVILAVNKVDNVQEKAD 134

Query: 120 RTREERIIAGDSLGGSVSLHLALAYPNLFSRVLSLSGAYY 159
                + +A       +    A    N+ +    +     
Sbjct: 135 LLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHLP 174


>BS_ybbA [R] COG2819 Predicted hydrolase of the alpha/beta superfamily
          Length = 228

 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 5/77 (6%), Positives = 13/77 (16%)

Query: 83  VAVRTQEYAPFGNRFKQYLSCFAEEIIPFIEHNYPVRRTREERIIAGDSLGGSVSLHLAL 142
                          K+  +          +          +   +G+       LH   
Sbjct: 19  GEHELSILTGVELVVKRGETIALVGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHNMD 78

Query: 143 AYPNLFSRVLSLSGAYY 159
                  R   +   + 
Sbjct: 79  EEARAKLRAKHVGFVFQ 95


>STM2775 [P] COG2382 Enterochelin esterase and related enzymes
          Length = 414

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 8/155 (5%)

Query: 9   RTIVKQTLWSEH--LQEERKLRIYLPPGYNEVLSYPVVYCQDGEEFFNFGRIATLAGQLI 66
           R    Q   SEH    + R++R+YLP     V    ++   DGE +F+   ++      I
Sbjct: 174 RAYAGQLFTSEHRLAGQRRRVRLYLP-DVPVVQPLGLLVLTDGEIWFDHLGVSAAIDAAI 232

Query: 67  LEQDIEPFIIVGVEVNVAVRTQEYAPFGNRFKQYLSCFAEEIIPFIEHNYPVRR--TREE 124
               I P  ++G++ N+  R +  A  G R +  L   AE ++P +   YP RR   R +
Sbjct: 233 RSGRIAPVAVLGID-NINAR-ERVAILGGRRELVLD-IAERLLPTLRAKYPERRWADRTQ 289

Query: 125 RIIAGDSLGGSVSLHLALAYPNLFSRVLSLSGAYY 159
            ++AG SLGG  +L  A   P  F  VLS S + +
Sbjct: 290 TVLAGQSLGGVTALMAARHAPESFGLVLSHSPSMW 324


>yieL [P] COG2382 Enterochelin esterase and related enzymes
          Length = 400

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 16/162 (9%)

Query: 11  IVKQTLWSEHLQEERKLRIYLPPGYNEVLS-YPVVY-----CQDGEEFFNFGRIATLAGQ 64
           ++  T  S  LQ ER++ ++ PPGY  +    PV+Y        G    + GRI  +   
Sbjct: 154 LIAITYHSNALQSERQMYVWTPPGYTGMGEPLPVLYFYHGFGDTGRSAIDQGRIPQIMDN 213

Query: 65  LILEQDIEPFIIVGVEVNVAVR---TQEYAPFGNRFKQY-LSCFA------EEIIPFIEH 114
           L+ E  I+P ++V  +     +    +++ P   R   Y L+  A       +IIP I  
Sbjct: 214 LLAEGKIKPMLVVIPDTETDAKGIIPEDFVPQERRKVFYPLNAKAADRELMNDIIPLISK 273

Query: 115 NYPVRRTREERIIAGDSLGGSVSLHLALAYPNLFSRVLSLSG 156
            + VR+  + R +AG S GG  +L   + +   F  + + SG
Sbjct: 274 RFNVRKDADGRALAGLSQGGYQALVSGMNHLESFGWLATFSG 315


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.322    0.140    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 17,636,736
Number of extensions: 649296
Number of successful extensions: 1669
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1669
Number of HSP's successfully gapped: 4
Length of query: 243
Length of database: 38,378,431
Length adjustment: 103
Effective length of query: 140
Effective length of database: 26,499,029
Effective search space: 3709864060
Effective search space used: 3709864060
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)