BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0462.0013.p (587 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BH2856 [E] COG1164 Oligoendopeptidase F 652 0.0 BS_yjbG [E] COG1164 Oligoendopeptidase F 637 0.0 lin2292 [E] COG1164 Oligoendopeptidase F 560 e-159 SA0859 [E] COG1164 Oligoendopeptidase F 522 e-148 SPy1393 [E] COG1164 Oligoendopeptidase F 457 e-128 >BH2856 [E] COG1164 Oligoendopeptidase F Length = 598 Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust. Identities = 305/587 (51%), Positives = 436/587 (74%), Gaps = 2/587 (0%) Query: 1 VPAENRWKLEDMFASQEQWDAEYKEAKELIHSASGFQGKLD-SPDALKKCFELDDKLSLL 59 +P + W LE +F++ E+W+ E+ E K LI S F+GKL S + L + D+++ Sbjct: 11 IPVDLTWDLEAIFSTDEEWEKEFNEVKGLIPSLVQFKGKLSQSAEILYAALQQQDEITER 70 Query: 60 TERLYVYAHMRQDEDTAAPTYQALSQKAKKLGVEAGEATSFITPEILALPDEKLDQFIAD 119 RLY YAHMR D+DT YQ L+ +A+ L + G+A SF+ PE++++ EK+D F+ + Sbjct: 71 LGRLYTYAHMRYDQDTTNSFYQGLNDRAQTLASQVGQAASFVVPELMSIEKEKIDTFLNE 130 Query: 120 -ASLSEYTFTLKEMKREKAHILTKAEEALLAQVGTLAQAPQTVFSMLNNADLKFPKIKNE 178 L+ Y L E+ +++ H+L++AEE++LAQ + AP F MLNNAD+ FP I NE Sbjct: 131 HEPLTLYRHMLDELNKQRPHVLSEAEESILAQASEVTSAPSNTFGMLNNADMTFPTIVNE 190 Query: 179 EGKEVDLTHGSYIQFLESPDREVRKNAFKAVYETYGKQKNTIAATLSANVNKNVFYSRVR 238 G+EV++THG Y+QFLES DR VRK+AF+AVY TY K KNT A+TLS+ V +++FY+ VR Sbjct: 191 NGEEVEVTHGRYLQFLESGDRRVRKDAFQAVYSTYEKYKNTFASTLSSQVKRDLFYANVR 250 Query: 239 KYPSVLEMSLYGDNIPKEVYTNLIDTIHESLPLMHRYMKLRQKLLGVDELHMYDLFAPLV 298 KY S E +L + IP+ VY L+ T++++L L+HRY+KLR+++LGVDELHMYDL+ PLV Sbjct: 251 KYKSAREAALSRNFIPEVVYDQLVSTVNDNLHLLHRYVKLRKRILGVDELHMYDLYTPLV 310 Query: 299 DEYKLDITFEEAKKITKEGLKPLGADYLSVLQEGYDKGWIDVYENENKRTGAYSWGAYGT 358 + ++ I+++EAK++ +G PLG Y+ +++GY+K WIDV EN+ KR+GAYS GAYGT Sbjct: 311 KDVEMKISYDEAKELVLKGFAPLGESYIDEIKQGYEKRWIDVVENKGKRSGAYSSGAYGT 370 Query: 359 HPYVLLNHNDNLNSMFTLAHEMGHALHSYYSDNALKYRDAQYTIFLAEVASTTNEALLMD 418 PY+L+N DN++++FTLAHE+GH++HS+YS Y YTIF+AEVAST NEALL D Sbjct: 371 MPYILMNWQDNIDNVFTLAHELGHSMHSFYSRKHQPYPYGDYTIFVAEVASTLNEALLND 430 Query: 419 YLLKKSTDPKEKMYLLTYYADQFRTTVFRQTMFAEFEKIIHQRAEEGESLTPQDLSAIYY 478 YL+K + + +EK+YLL ++ + FR TVFRQTMFAEFE++IH+++ +G LTP+ LS +YY Sbjct: 431 YLVKNTNNEQEKIYLLNHFLEGFRGTVFRQTMFAEFEQLIHEQSADGIPLTPELLSKLYY 490 Query: 479 DLNVKYYGKDMVVDKDIEMEWARIPHFYNSFYVYKYATGFSAATSFAKQILEDGKPAVDK 538 DLNVKY+G ++V+DK+I +EWARIPHFY +FYVY+YATG+SAA + AKQILEDG P V++ Sbjct: 491 DLNVKYFGDEIVIDKEIGLEWARIPHFYYNFYVYQYATGYSAAAALAKQILEDGAPVVER 550 Query: 539 YLGFLKSGGSDYSINILSKAGVDMSSPAPIREAMSVFESVIEQMEQL 585 YL FLK+G S Y I+IL AGVDM+S PI+EA+S+FE ++++E L Sbjct: 551 YLDFLKAGSSQYPIDILKHAGVDMTSKKPIQEALSLFEKTLDEIEAL 597 >BS_yjbG [E] COG1164 Oligoendopeptidase F Length = 245 Score = 637 bits (1644), Expect = 0.0, Method: Compositional matrix adjust. Identities = 0/587 (0%), Positives = 0/587 (0%), Gaps = 2/587 (0%) Query: 1 VPAENRWKLEDMFASQEQWDAEYKEAKELIHSASGFQGKL-DSPDALKKCFELDDKLSLL 59 ++ + + + + L Sbjct: 16 SSVFAAGTVKVFSNGSSEAKTLTGAEHLIDLVGQPRLANSWWPGAVISEELATAAALRQQ 75 Query: 60 TERLYVYAHMRQDEDTAAPTYQALSQKAKKLGVEAGEATSFITPEILALPDEKLDQFIAD 119 L A D ++ + G + P+I+ + + + Sbjct: 76 QALLTRLAEQGADSSADDAAAINALRQQIQALKVTGRQKINLDPDIVRVAERGNPPLQGN 135 Query: 120 AS-LSEYTFTLKEMKREKAHILTKAEEALLAQVGTLAQAPQTVFSMLNNADLKFPKIKNE 178 + + + + + L+ + + A + +P + + Sbjct: 136 YTLWVGPPPSTVTLFGLISRPGKQPFTPGRDVASYLSDQSLLSGADRSYAWVVYPDGRTQ 195 Query: 179 EGKEVDLTHGSYIQFLESPDREVRKNAFKAVYETYGKQKNTIAATLSANVNKNVFYSRVR 238 Sbjct: 196 255 Query: 239 KYPSVLEMSLYGDNIPKEVYTNLIDTIHESLPLMHRYMKLRQKLLGVDELHMYDLFAPLV 298 Sbjct: 256 315 Query: 299 DEYKLDITFEEAKKITKEGLKPLGADYLSVLQEGYDKGWIDVYENENKRTGAYSWGAYGT 358 Sbjct: 316 375 Query: 359 HPYVLLNHNDNLNSMFTLAHEMGHALHSYYSDNALKYRDAQYTIFLAEVASTTNEALLMD 418 Sbjct: 376 435 Query: 419 YLLKKSTDPKEKMYLLTYYADQFRTTVFRQTMFAEFEKIIHQRAEEGESLTPQDLSAIYY 478 Sbjct: 436 495 Query: 479 DLNVKYYGKDMVVDKDIEMEWARIPHFYNSFYVYKYATGFSAATSFAKQILEDGKPAVDK 538 Sbjct: 496 555 Query: 539 YLGFLKSGGSDYSINILSKAGVDMSSPAPIREAMSVFESVIEQMEQL 585 Sbjct: 556 602 >lin2292 [E] COG1164 Oligoendopeptidase F Length = 671 Score = 560 bits (1444), Expect = e-159, Method: Compositional matrix adjust. Identities = 38/589 (6%), Positives = 108/589 (18%), Gaps = 2/589 (0%) Query: 1 VPAENRWKLEDMFASQEQWDAEYKEAKELIHSASGFQGKL-DSPDALKKCFELDDKLSLL 59 + L + + E DAEY + +L ++ Sbjct: 13 TTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQ 72 Query: 60 TERLYVYAHMRQDEDTAAPTYQALSQKAKKLGVEAGEATSFITPEILALPDEKLDQFI-A 118 + D + + + E + + LA+ + + + Sbjct: 73 IRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVS 132 Query: 119 DASLSEYTFTLKEMKREKAHILTKAEEALLAQVGTLAQAPQTVFSMLNNADLKFPKIKNE 178 A+ + T + + L + + + Sbjct: 133 AATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTG 192 Query: 179 EGKEVDLTHGSYIQFLESPDREVRKNAFKAVYETYGKQKNTIAATLSANVNKNVFYSRVR 238 + + + + R K G + + Sbjct: 193 GKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLP 252 Query: 239 KYPSVLEMSLYGDNIPKEVYTNLIDTIHESLPLMHRYMKLRQKLLGVDELHMYDLFAPLV 298 V + + + Sbjct: 253 VSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVA 312 Query: 299 DEYKLDITFEEAKKITKEGLKPLGADYLSVLQEGYDKGWIDVYENENKRTGAYSWGAYGT 358 ++ + + + + ++ L+ + G + + G Sbjct: 313 FKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIG 372 Query: 359 HPYVLLNHNDNLNSMFTLAHEMGHALHSYYSDNALKYRDAQYTIFLAEVASTTNEALLMD 418 V+ D + + + + A L+ Sbjct: 373 DKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLIC 432 Query: 419 YLLKKSTDPKEKMYLLTYYADQFRTTVFRQTMFAEFEKIIHQRAEEGESLTPQDLSAIYY 478 +K + + + LT + Sbjct: 433 GAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKS 492 Query: 479 DLNVKYYGKDMVVDKDIEMEWARIPHFYNSFYVYKYATGFSAATSFAKQILEDGKPAVDK 538 NV + +A A F + +E+ + D Sbjct: 493 AQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDV 552 Query: 539 YLGFLKSGGSDYSINILSKAGVDMSSPAPIREAMSVFESVIEQMEQLTK 587 + + ++ ++ + A V + K Sbjct: 553 GIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 >SA0859 [E] COG1164 Oligoendopeptidase F Length = 602 Score = 522 bits (1345), Expect = e-148, Method: Compositional matrix adjust. Identities = 258/584 (44%), Positives = 382/584 (65%), Gaps = 4/584 (0%) Query: 7 WKLEDMFASQEQWDAEYKEAKELIHSASGFQGKL-DSPDALKKCFELDDKLSLLTERLYV 65 W L +F E ++A +KE + + F+G + DS + L EL+D L E++YV Sbjct: 19 WDLTTIFKDDEAFEAAFKEVENELGKEEQFKGHIGDSAETLYNALELEDTLGTKLEKVYV 78 Query: 66 YAHMRQDEDTAAPTYQALSQKAKKLGVEAGEATSFITPEILALPDEKLDQFIAD-ASLSE 124 YAH++QD+DT Y + +A +L ++ A SF+ PEIL + ++K+ F+ L + Sbjct: 79 YAHLKQDQDTTNDKYTGMESRAHQLIIKFSSAWSFLVPEILQIDEDKIQSFVNSYDKLQK 138 Query: 125 YTFTLKEMKREKAHILTKAEEALLAQVGTLAQAPQTVFSMLNNADLKFPKIKNEEGKEVD 184 + F LK + ++ HIL E LL + P V+ M +NADL F +++G Sbjct: 139 FAFDLKLINEKRPHILDAETEKLLTEAQDALSTPSNVYGMFSNADLVFEDAIDKDGNAHP 198 Query: 185 LTHGSYIQFLESPDREVRKNAFKAVYETYGKQKNTIAATLSANVNKNVFYSRVRKYPSVL 244 LT G++I++LES DR++R++AF+ VY+ YG NT+ ATL+ V KNVF +R Y + Sbjct: 199 LTQGTFIKYLESDDRKLRESAFRNVYKAYGAHNNTLGATLAGEVKKNVFNARTHNYKTAR 258 Query: 245 EMSLYGDNIPKEVYTNLIDTIHESLPLMHRYMKLRQKLLGVDELHMYDLFAPLVDEYKLD 304 E +L ++IP+ VY NL+ T+H+ LPL+HRY +LR++LLG+D+L MYDL+ PL+ + K + Sbjct: 259 EKALSNNHIPENVYDNLVKTVHKYLPLLHRYTELRKELLGLDDLKMYDLYTPLIKDIKFE 318 Query: 305 ITFEEAKKITKEGLKPLGADYLSVLQEGYDKGWIDVYENENKRTGAYSWGAYGTHPYVLL 364 + +EEAK+ + L+P+G +YL+V++EG + W+DVYEN+ KR+G YS GA+ T+P++LL Sbjct: 319 MPYEEAKEWMLKALEPMGEEYLNVVKEGLNNRWVDVYENKGKRSGGYSSGAHLTNPFILL 378 Query: 365 NHNDNLNSMFTLAHEMGHALHSYYSDNALKYRDAQYTIFLAEVASTTNEALLMDYLLKKS 424 N ++ ++ ++TL HE GH+ HSY+S + YTIF+AEVAST NEALL DY + K Sbjct: 379 NWSNTISDLYTLVHEFGHSAHSYFSRKFQPSNSSDYTIFVAEVASTCNEALLSDY-MDKH 437 Query: 425 TDPKEKMYLLTYYADQFRTTVFRQTMFAEFEKIIHQRAEEGESLTPQDLSAIYYDLNVKY 484 D ++++ LL ++FR T+FRQTMFAEFE IH E GE LTP ++ Y LN Y Sbjct: 438 LDDEKRLLLLNQELERFRATLFRQTMFAEFEHKIHAIEEAGEPLTPTRMNEEYAKLNKLY 497 Query: 485 YGKDMVVDKDIEMEWARIPHFYNSFYVYKYATGFSAATSFAKQILEDGKPAVDKYLG-FL 543 +G + D+DI EW+RIPHFY ++YVY+YATG+SAA S + QIL +GKPAVD+Y+ FL Sbjct: 498 FGDSVETDEDISKEWSRIPHFYMNYYVYQYATGYSAAQSLSHQILTEGKPAVDRYINEFL 557 Query: 544 KSGGSDYSINILSKAGVDMSSPAPIREAMSVFESVIEQMEQLTK 587 K G S+Y I IL AGVDM++P PI +A VFE + E+L K Sbjct: 558 KKGSSNYPIEILKNAGVDMTTPEPIEQACEVFEQKLNAFEKLMK 601 >SPy1393 [E] COG1164 Oligoendopeptidase F Length = 601 Score = 457 bits (1176), Expect = e-128, Method: Compositional matrix adjust. Identities = 243/582 (41%), Positives = 368/582 (63%), Gaps = 3/582 (0%) Query: 7 WKLEDMFASQEQWDAEYKEAKELIHSASGFQGKL-DSPDALKKCFELDDKLSLLTERLYV 65 W L +FA+ + W+AE + + ++ GF G L DS L K + +L+ E++YV Sbjct: 14 WDLSTIFATDKDWEAEVSDLATEVEASKGFAGHLLDSSANLLKVTKTYLELARRVEKVYV 73 Query: 66 YAHMRQDEDTAAPTYQALSQKAKKLGVEAGEATSFITPEILALPDEKLDQFIADA-SLSE 124 YAHM+ D+DT YQ KA L + E SF PE++ L E F+ + L Sbjct: 74 YAHMKNDQDTTVAKYQEYQAKASGLYAKFSEVFSFYDPEVMMLHQEDYQAFLTETPELKV 133 Query: 125 YTFTLKEMKREKAHILTKAEEALLAQVGTLAQAPQTVFSMLNNADLKFPKIKNEEGKEVD 184 Y ++ + + H+L++AEE LLA + + FS+L+NAD+ FP +KN++G++V+ Sbjct: 134 YNHFFDKLFQAREHVLSQAEEELLAGAQEIFNGAEETFSILDNADIVFPVVKNDKGEDVE 193 Query: 185 LTHGSYIQFLESPDREVRKNAFKAVYETYGKQKNTIAATLSANVNKNVFYSRVRKYPSVL 244 LTHG++I +ES DR VR+ A++A+Y TY + ++T A TL NV + +RV KY S Sbjct: 194 LTHGNFISLMESKDRSVRQAAYEAMYSTYEQFQHTYAKTLQTNVKVQNYKARVHKYDSAR 253 Query: 245 EMSLYGDNIPKEVYTNLIDTIHESLPLMHRYMKLRQKLLGVDELHMYDLFAPLVDEYKLD 304 + ++ + IP+ VY L++T+++ LPL+HRY+KLRQ++LG+D+L MYD++ PL E L Sbjct: 254 QAAMAANFIPEAVYDTLLETVNKHLPLLHRYLKLRQEVLGLDDLKMYDVYTPL-SETDLA 312 Query: 305 ITFEEAKKITKEGLKPLGADYLSVLQEGYDKGWIDVYENENKRTGAYSWGAYGTHPYVLL 364 I ++EA + ++ L G DY + + + WIDV+ N+ KR+GAYS G+Y T+ ++LL Sbjct: 313 IGYDEALEKAEKVLAVFGKDYADRVHRAFTERWIDVHVNKGKRSGAYSGGSYDTNAFILL 372 Query: 365 NHNDNLNSMFTLAHEMGHALHSYYSDNALKYRDAQYTIFLAEVASTTNEALLMDYLLKKS 424 N D L++++TL HE GH+LHS ++ Y Y+IFLAE+ASTTNE ++ + LL + Sbjct: 373 NWQDTLDNLYTLVHETGHSLHSTFTRETQPYVYGDYSIFLAEIASTTNENIMTEALLNEV 432 Query: 425 TDPKEKMYLLTYYADQFRTTVFRQTMFAEFEKIIHQRAEEGESLTPQDLSAIYYDLNVKY 484 D KE+ +L +Y D FR TVFRQT FAEFE IHQ ++GE LT + L+ +Y DLN KY Sbjct: 433 QDEKERFAILNHYLDGFRGTVFRQTQFAEFEHAIHQADQKGEVLTSEYLNQLYADLNEKY 492 Query: 485 YGKDMVVDKDIEMEWARIPHFYNSFYVYKYATGFSAATSFAKQILEDGKPAVDKYLGFLK 544 YG + I+ EWARIPHFY ++YVY+YATGF+AA+ A +I+ + +D YL +LK Sbjct: 493 YGLSKKDNHFIQYEWARIPHFYYNYYVYQYATGFAAASYLADKIVHGTQDDIDHYLAYLK 552 Query: 545 SGGSDYSINILSKAGVDMSSPAPIREAMSVFESVIEQMEQLT 586 SG SDY + +++KAGVDM + A VF+ + ++E L Sbjct: 553 SGNSDYPLEVIAKAGVDMEKGDYLEAAFKVFDERLTELEVLV 594 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.316 0.132 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 43,053,743 Number of extensions: 1781100 Number of successful extensions: 4184 Number of sequences better than 1.0e-05: 21 Number of HSP's gapped: 4120 Number of HSP's successfully gapped: 21 Length of query: 587 Length of database: 38,378,431 Length adjustment: 112 Effective length of query: 475 Effective length of database: 25,461,023 Effective search space: 12093985925 Effective search space used: 12093985925 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 119 (50.4 bits)