BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0459.0032.p
         (94 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA0293 [R] COG0388 Predicted amidohydrolase                           109   1e-24
YPO0938 [R] COG0388 Predicted amidohydrolase                          102   1e-22
CC0212 [R] COG0388 Predicted amidohydrolase                            86   1e-17
DR2535 [R] COG0388 Predicted amidohydrolase                            65   2e-11
HP0757 [R] COG0388 Predicted amidohydrolase                            64   6e-11

>PA0293 [R] COG0388 Predicted amidohydrolase
          Length = 292

 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 53/90 (58%), Positives = 62/90 (68%)

Query: 3   GHAAANLIPVVASNRIGEETDEDSSINFYGSSFIAGPQGNKIVEAGRDEQAVLVSEFDLD 62
           GHA ANL+P+VASNRIG E  +   I FYGSSFIA P G K+ E  R E+ +LV  FDLD
Sbjct: 201 GHAGANLMPLVASNRIGREEQDGYDITFYGSSFIADPFGEKVEELNRTEEGILVHTFDLD 260

Query: 63  ALEVGRIEWGIFRDRRPELYRMIASYDGDL 92
           ALE  R  WG+FRDRRP LY  + + DG L
Sbjct: 261 ALERTRSAWGVFRDRRPNLYGPLKTLDGSL 290


>YPO0938 [R] COG0388 Predicted amidohydrolase
          Length = 294

 Score =  102 bits (254), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 3/91 (3%)

Query: 3   GHAAANLIPVVASNRIGEETD---EDSSINFYGSSFIAGPQGNKIVEAGRDEQAVLVSEF 59
           GHAAANL+PV+ASNRIG E     +   + FYGSSFIA   G  + +A + ++AVLV EF
Sbjct: 200 GHAAANLVPVIASNRIGTEKSKYIDGLEMTFYGSSFIADQTGALLAQANKTDEAVLVHEF 259

Query: 60  DLDALEVGRIEWGIFRDRRPELYRMIASYDG 90
           DL  +   R  WG+FRDRRPE+Y+ +A+ DG
Sbjct: 260 DLQEIAAQRASWGLFRDRRPEMYQTLATSDG 290


>CC0212 [R] COG0388 Predicted amidohydrolase
          Length = 292

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 3/90 (3%)

Query: 1   MLGHAAANLIPVVASNRIGEETDE---DSSINFYGSSFIAGPQGNKIVEAGRDEQAVLVS 57
           M GHA +N+IPV+ +NRIG E  +   +    FYGSSF+A  +G+ + E GR ++ ++ +
Sbjct: 199 MQGHAVSNVIPVIGANRIGFEPWDGYPNGGQTFYGSSFVADHRGDLVSELGRADEGLVSA 258

Query: 58  EFDLDALEVGRIEWGIFRDRRPELYRMIAS 87
            FDLD L   R  WG FRDRRPELY  ++S
Sbjct: 259 TFDLDFLTTHRAAWGFFRDRRPELYTALSS 288


>DR2535 [R] COG0388 Predicted amidohydrolase
          Length = 297

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 49/90 (54%)

Query: 1   MLGHAAANLIPVVASNRIGEETDEDSSINFYGSSFIAGPQGNKIVEAGRDEQAVLVSEFD 60
           M+GHA +N   V +SNRIG+E        +YG SFI+   G  + E G  E+  L+ E +
Sbjct: 203 MVGHAVSNSSYVGSSNRIGKEIVGGLEQTYYGHSFISDYTGELVAELGDSEEGPLLHELN 262

Query: 61  LDALEVGRIEWGIFRDRRPELYRMIASYDG 90
           L      R   G FRDRRPELY  + + DG
Sbjct: 263 LKEARKFRAGMGFFRDRRPELYGPLLTTDG 292


>HP0757 [R] COG0388 Predicted amidohydrolase
          Length = 292

 Score = 63.9 bits (154), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 5/84 (5%)

Query: 3   GHAAANLIPVVASNRIGEETDEDSS----INFYGSSFIAGPQGNKIVEAGRDEQAVLVSE 58
           GHA AN +P++A+NR+G E D   +    I F+GSSF+ G  G  + +A  D++ +L +E
Sbjct: 202 GHAIANGLPLIATNRVGVELDPSGAIKGGITFFGSSFVVGALGEFLAKAS-DKEEILYAE 260

Query: 59  FDLDALEVGRIEWGIFRDRRPELY 82
            DL+  E  R  W   RDRR + Y
Sbjct: 261 IDLERTEEVRRMWPFLRDRRIDFY 284


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.318    0.138    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 6,827,354
Number of extensions: 238570
Number of successful extensions: 469
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 466
Number of HSP's successfully gapped: 10
Length of query: 94
Length of database: 38,378,431
Length adjustment: 63
Effective length of query: 31
Effective length of database: 31,112,389
Effective search space: 964484059
Effective search space used: 964484059
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 109 (46.6 bits)