BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0459.0023.p (247 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CAC1415 [P] COG0861 Membrane protein TerC, possibly involved in ... 244 1e-64 BS_yceF [P] COG0861 Membrane protein TerC, possibly involved in ... 243 2e-64 BS_ykoY [P] COG0861 Membrane protein TerC, possibly involved in ... 141 8e-34 lin0990 [P] COG0861 Membrane protein TerC, possibly involved in ... 140 2e-33 BH2553 [P] COG0861 Membrane protein TerC, possibly involved in t... 140 3e-33 >CAC1415 [P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance Length = 246 Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 127/245 (51%), Positives = 172/245 (70%), Gaps = 6/245 (2%) Query: 6 DFFRSISDNYGHFFSWSDIVGTLSDPVSWGIIGSLVLLEGLLSADNALVLAVMVKHLPKE 65 +F + +NY FFS ++ TLSDP + +I SL++LEGLLS+DNA+VLA+MVKHLPK+ Sbjct: 2 NFLHGLVNNYAQFFSLKVLIATLSDPSNLMMIFSLIILEGLLSSDNAVVLAIMVKHLPKK 61 Query: 66 QQKKALFYGILGAYLFRFLAIGLGTYLIGFWEVKVAGALYLFYIAYKGLFKXXXXXXXTK 125 QQK+ALFYGI GAY+FRF+AIG+GTYLI W VK+ ALYL + Y + Sbjct: 62 QQKRALFYGIWGAYIFRFIAIGVGTYLIKIWWVKLIAALYLLKMTYSHFAGKAEDDDVDE 121 Query: 126 NRGAS--FWKTVLLVELMDIAFSIDSVIAAFGLSNEVWVLFLGGILGVLMMRGVAQLFLK 183 ++ + FW TV VELMDIAFSIDSV AAFG+S++VWVLFLG + G+L MRGVAQ+F+ Sbjct: 122 SKVSKKGFWATVATVELMDIAFSIDSVSAAFGVSSKVWVLFLGAVFGILAMRGVAQIFVA 181 Query: 184 LIARFPELEQTAFLLIAIIAGKMLAGAFGYEMPHVVFFTILIAVFVGTILY----SSGKK 239 LI + PE+E +A++LI II KML E+P+ +FF +++ VF GTI + +G K Sbjct: 182 LIEKVPEMESSAYVLIGIIGIKMLLNLINIEIPNTIFFGVIVVVFGGTIAFHYIRQAGVK 241 Query: 240 KREAN 244 ++ N Sbjct: 242 SQKQN 246 >BS_yceF [P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance Length = 207 Score = 243 bits (619), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 0/249 (0%), Positives = 0/249 (0%), Gaps = 8/249 (3%) Query: 6 DFFRSISDNYGHFFSWSDIVGTLSDPVSWGIIGSLVLLEGLLSADNALVLAVMVKHLPKE 65 ++ + + + + + + + Sbjct: 2 AIINTLYLMEKNMPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLRL 61 Query: 66 QQKKALFYGILGAYLFRFLAIGLGTYLIGFWEVKVAGALYLFYIAYKGLF---KXXXXXX 122 Q+KA + + + + Sbjct: 62 AQEKAQSLASRYPDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTFYTGLAL 121 Query: 123 XTKNRGAS-----FWKTVLLVELMDIAFSIDSVIAAFGLSNEVWVLFLGGILGVLMMRGV 177 G + + + G L + Sbjct: 122 FNSANGHLQTEVEPFDVHFRHLSEAEIDNYVRKEHPLHCAGSFKSEGFGITLFERLEGRD 181 Query: 178 AQLFLKLIARFPELEQTAFLLIAIIAGKMLAGAFGYEMPHVVFFTILIAVFVGTILYSSG 237 Sbjct: 182 241 Query: 238 KKKREANRK 246 Sbjct: 242 250 >BS_ykoY [P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance Length = 324 Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 91/245 (37%), Positives = 137/245 (55%), Gaps = 44/245 (17%) Query: 40 LVLLEGLLSADNALVLAVMVKHLPKEQQKKALFYGILGAYLFRFLAIGLGTYLIGFWEVK 99 L+ LEG+L+ADNALV+AVMVKHLP+E++KKALFYG+ GA++ RF ++ ++L+ W+V+ Sbjct: 76 LIGLEGILAADNALVMAVMVKHLPEEKRKKALFYGLAGAFVLRFGSLFAISFLVNVWQVQ 135 Query: 100 VAGALYLFYIAYKGL-----FKXXXXXXXTKNRGASFWKTVLLVELMDIAFSIDSVIAAF 154 GA+YL YI+ L FK TK G FW TVL VEL DIAF++DS++AA Sbjct: 136 AIGAIYLLYISASHLLKRYVFKKEDTHKETKQSG--FWPTVLKVELADIAFAVDSILAAV 193 Query: 155 GLS----------------NEVWVLFLGGILGVLMMRGVAQLFLKLIARFPELEQTAFLL 198 L+ + V+ GGI+G+++MR A +F+KL+ P LE AF++ Sbjct: 194 ALAVTLPGTSLPKIGGLDGGQFLVILAGGIIGLVIMRFAASMFVKLLKERPSLETAAFVI 253 Query: 199 IAIIAGKMLAGAFGYEMPH-----------------VVFFTILIAVFVGTILYSSGKKKR 241 + + K+ Y + H ++F+ +L A+ V S GKK+ Sbjct: 254 VGWVGVKLAL----YTLAHRDIAVVSEHFIHSGTWKLIFWGVLAAIAVCGWFMSGGKKQP 309 Query: 242 EANRK 246 E + Sbjct: 310 EGAQN 314 >lin0990 [P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance Length = 255 Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 89/240 (37%), Positives = 141/240 (58%), Gaps = 34/240 (14%) Query: 40 LVLLEGLLSADNALVLAVMVKHLPKEQQKKALFYGILGAYLFRFLAIGLGTYLIGFWEVK 99 L+ LEG+L+ADNA+V+AVMVKHLP +QQKKALFYG++GA++FRF A+ L ++L W+V+ Sbjct: 16 LIGLEGILAADNAVVMAVMVKHLPDKQQKKALFYGLMGAFVFRFGALFLISFLANVWQVQ 75 Query: 100 VAGALYLFYIAYKGLFKXX----XXXXXTKNRGASFWKTVLLVELMDIAFSIDSVIAAFG 155 GA YL YIA ++K + G+ FW TVL VE+ DIAF+IDS++AA Sbjct: 76 ALGAAYLLYIAISHIWKHAKGKDGEKEKKEKAGSGFWMTVLKVEIADIAFAIDSMLAAVA 135 Query: 156 L----------------SNEVWVLFLGGILGVLMMRGVAQLFLKLIARFPELEQTAFLLI 199 L + + ++FLGG++G++++R A F+KL+ +P LE AFL++ Sbjct: 136 LAITLPETGWGHIGGIDTGQFAIMFLGGLVGLIIIRFAATQFVKLLKSYPSLETAAFLIV 195 Query: 200 AIIAGKMLAGAFGYE----MPH---------VVFFTILIAVFV-GTILYSSGKKKREANR 245 + K++ + +PH ++F+ ++I + + G + KKK E + Sbjct: 196 GWVGVKLVIYTLAHPSLGVIPHSFPESTLWKLIFWGVMILIILWGWFVSYRSKKKTETTK 255 >BH2553 [P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance Length = 265 Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 83/198 (41%), Positives = 122/198 (61%), Gaps = 25/198 (12%) Query: 33 SWGIIGSLVLLEGLLSADNALVLAVMVKHLPKEQQKKALFYGILGAYLFRFLAIGLGTYL 92 SW +I L++LEGLL+ADNALVLAVMVKHLP+E++KKALFYG+ GA+LFRF ++ ++L Sbjct: 10 SW-VILVLIVLEGLLAADNALVLAVMVKHLPEEKRKKALFYGLAGAFLFRFASLFAISFL 68 Query: 93 IGFWEVKVAGALYLFYIAYKGLFK--------XXXXXXXTKNRGASFWKTVLLVELMDIA 144 I W+++ GALYL +IA + + + A FW TVL VE+ DIA Sbjct: 69 IDIWQLQAIGALYLMFIAVNHIVRKVWLRGHEEVAAATEKPVKKAGFWTTVLKVEIADIA 128 Query: 145 FSIDSVIAAFGLS----------------NEVWVLFLGGILGVLMMRGVAQLFLKLIARF 188 F++DS++AA ++ V+F+GG +GV++MR A LF+ L+ + Sbjct: 129 FAVDSILAAVAIAVSLPKTNLPTIGGMDGGHFIVVFIGGFMGVVIMRFAANLFVTLLQKK 188 Query: 189 PELEQTAFLLIAIIAGKM 206 P LE AFL++ + K+ Sbjct: 189 PGLEIAAFLIVGWVGVKL 206 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.330 0.145 0.441 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 17,525,546 Number of extensions: 684889 Number of successful extensions: 2258 Number of sequences better than 1.0e-05: 48 Number of HSP's gapped: 2196 Number of HSP's successfully gapped: 48 Length of query: 247 Length of database: 38,378,431 Length adjustment: 104 Effective length of query: 143 Effective length of database: 26,383,695 Effective search space: 3772868385 Effective search space used: 3772868385 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 114 (48.5 bits)