BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0454.0011.p
         (71 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BH0487 [R] COG0673 Predicted dehydrogenases and related proteins       54   6e-08
BS_yteT [R] COG0673 Predicted dehydrogenases and related proteins      49   1e-06

>BH0487 [R] COG0673 Predicted dehydrogenases and related proteins
          Length = 430

 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 35/64 (54%)

Query: 1   VRGEGGHGGGDPVLLRDLFDHPDKHRGYEILXXXXXXXXXXXXXXXVWLSNREGRAITIE 60
           V  EGGHGGGDP+LL DLF   D  R YEIL               VW S + G+ I I+
Sbjct: 361 VTNEGGHGGGDPILLEDLFLGVDPARPYEILAGAQAGADSIAVGEAVWRSVQTGQPIKID 420

Query: 61  DLLQ 64
           DLL+
Sbjct: 421 DLLK 424


>BS_yteT [R] COG0673 Predicted dehydrogenases and related proteins
          Length = 428

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/64 (40%), Positives = 34/64 (53%)

Query: 1   VRGEGGHGGGDPVLLRDLFDHPDKHRGYEILXXXXXXXXXXXXXXXVWLSNREGRAITIE 60
           V+ EGGHGGGDP+LL DLF   D  R Y+IL               +W S  E + I ++
Sbjct: 361 VKNEGGHGGGDPLLLEDLFLGKDPLRRYDILAGAEAGAYSIAVGEGMWRSVAEKKPIGMK 420

Query: 61  DLLQ 64
           +L Q
Sbjct: 421 ELFQ 424


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.321    0.149    0.472 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 5,326,706
Number of extensions: 133218
Number of successful extensions: 171
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 171
Number of HSP's successfully gapped: 2
Length of query: 71
Length of database: 38,378,431
Length adjustment: 42
Effective length of query: 29
Effective length of database: 33,534,403
Effective search space: 972497687
Effective search space used: 972497687
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 109 (46.6 bits)