BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0442.0017.p
         (181 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAC3407 [R] COG1073 Hydrolases of the alpha/beta superfamily           97   1e-20

>CAC3407 [R] COG1073 Hydrolases of the alpha/beta superfamily
          Length = 431

 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 96/174 (55%), Gaps = 8/174 (4%)

Query: 5   WCSGDEFSSYAVFVADETGKVDFDLAKPVEGSYETANSMGLIYSLKQSTSTGKNIAENIS 64
           W     F S+AVF AD+ G VD     P++GSY   +SMGL +S+  +      + +++S
Sbjct: 56  WVKKTNFESFAVFKADDKGTVDLSKDAPIKGSYTRVDSMGLFWSMVSTQQQDYTLKKSLS 115

Query: 65  IEKPII--MHLLFESSIERKEV---QLKRLFKAEDILVKQINES-FTGQLFYQKNTN-NK 117
              P +  M ++ +  +  KE+   + K+LF + D+  + + E+   G+ F  KN+   K
Sbjct: 116 -SCPFLTSMEVILKVEVCGKELVSSKCKKLFVSSDVKCQYVTENNLVGKYFTNKNSKIKK 174

Query: 118 TVLMVGGSDGQMQSLALMAGPLASRGFNVLITSYFASKGLPEKLEEVPLEYFEK 171
            ++++ GS+G + + + +A  LAS G+  L  +YF    LP  L E+PLEYFEK
Sbjct: 175 GIIVLSGSEGGIHNASQIAALLASHGYPSLALAYFGMDTLPATLNEIPLEYFEK 228


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.315    0.133    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 12,017,479
Number of extensions: 445376
Number of successful extensions: 919
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 918
Number of HSP's successfully gapped: 1
Length of query: 181
Length of database: 38,378,431
Length adjustment: 100
Effective length of query: 81
Effective length of database: 26,845,031
Effective search space: 2174447511
Effective search space used: 2174447511
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 112 (47.8 bits)