BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0442.0016.p
         (221 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAC3407 [R] COG1073 Hydrolases of the alpha/beta superfamily           90   3e-18
RSc1887_1 [R] COG1073 Hydrolases of the alpha/beta superfamily         81   1e-15

>CAC3407 [R] COG1073 Hydrolases of the alpha/beta superfamily
          Length = 431

 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 21/207 (10%)

Query: 16  DIYLHGTSKGGELVLLLASRYKQIRKVVAVEPHTYCFQALDGLMSGRNVSSWSYQGKSIP 75
           ++ + G S+GGEL LLL S +K+I  V+AV      F       +   +SSW Y+G+ IP
Sbjct: 243 NLTVFGRSRGGELALLLGSTFKKITSVIAVAASPILFGT-----NTTKLSSWKYKGEDIP 297

Query: 76  FIEVDNKI--FFEDQKKDIEKGIPFGFASTYRKSIENATNLEESRIKVENSQAEILLICG 133
           ++ +   I  F ++   D   G    F+  Y  +I+N   +E   I +EN+   IL++ G
Sbjct: 298 YLNLKINIISFLKNALTDKLHGRTINFSKLYTNAIKNPDAIETYMIPIENTNGSILMLSG 357

Query: 134 KKDNIWNSYDACLEILKNLKSNNYKHHAELLSYENMGHPMPIPYIVPISLTLEMPMNGGV 193
             D+IW S   C   ++ LK +N+  + + L Y+  GH +  PY          P    +
Sbjct: 358 DNDHIWPSSKLCKLGIERLKQHNFSFYYDFLEYK-AGHHIYFPY---------QP----I 403

Query: 194 FSSGGTIEGNAEGQFQSFKRTIEFFNE 220
           +   G+ E  A    +S+ + +EF  +
Sbjct: 404 YKYNGSNENMAISNRESWNKILEFLQK 430


>RSc1887_1 [R] COG1073 Hydrolases of the alpha/beta superfamily
          Length = 447

 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 5/207 (2%)

Query: 17  IYLHGTSKGGELVLLLASRY-KQIRKVVAVEPHTYCFQALDGL--MSGRNVSSWSYQGKS 73
           + + G S+GGEL LLL + +   +  V+   P      A +      GR   +W Y+G+ 
Sbjct: 227 VAVSGQSRGGELALLLGATFPAAVSAVIGYVPGAVVHSAQNAADPAIGREGPTWLYRGRP 286

Query: 74  IPFIEVDNKIFFEDQKKDIEKGIPFGFASTYRKSIENATNLEESRIKVENSQAEILLICG 133
           +P +   N+        + E   P       R ++ +A  +E +RI+VE ++  +LL+  
Sbjct: 287 LPHLWEGNRTATWAPFDEGEP--PHRHERAIRTALRDAQAVERARIRVEQTRGPVLLLSA 344

Query: 134 KKDNIWNSYDACLEILKNLKSNNYKHHAELLSYENMGHPMPIPYIVPISLTLEMPMNGGV 193
             D  W S D        L    + +      +   GH +  PY+    L    P++G +
Sbjct: 345 TDDGSWPSSDYARMAAARLAEARHPYPVVHHDFAGAGHAIVFPYVPTTQLVHAHPVSGRI 404

Query: 194 FSSGGTIEGNAEGQFQSFKRTIEFFNE 220
            + GG    NA    QS+     F  E
Sbjct: 405 STGGGEPRANARADLQSWAAVRRFLAE 431


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.316    0.135    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 15,812,588
Number of extensions: 609122
Number of successful extensions: 2741
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 2739
Number of HSP's successfully gapped: 2
Length of query: 221
Length of database: 38,378,431
Length adjustment: 102
Effective length of query: 119
Effective length of database: 26,614,363
Effective search space: 3167109197
Effective search space used: 3167109197
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 114 (48.5 bits)