BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0442.0006.p
         (229 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

MTH1688 [S] COG2454 Uncharacterized conserved protein                 206   3e-53
MTH1684_2 [C] COG1146 Ferredoxin                                      206   3e-53
MTH1684_1 [S] COG1900 Uncharacterized conserved protein               206   3e-53
MTH1687 [S] COG2454 Uncharacterized conserved protein                 206   3e-53

>MTH1688 [S] COG2454 Uncharacterized conserved protein
          Length = 268

 Score =  206 bits (523), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 11/218 (5%), Positives = 39/218 (17%), Gaps = 4/218 (1%)

Query: 1   MKFAVLVFPGSNCDIDCYKAVEDSLGEPVEYVWHTATDLSAYDCILVPGGFSYGDYLRCG 60
           M    L     +        ++    +    +   A+       ++              
Sbjct: 1   MNRVDLSIFIPDSLTAETGDLKIKTYKV-VLIARAASIFGVKRIVIYHDDADGEARFIRD 59

Query: 61  AISRFAPVMAEVAKAAEQGKFVLGICNGFQILTEAGLLPGALRRNMSMKFRCHDTVLKVV 120
            ++          K     + +  +     + T        +                 +
Sbjct: 60  ILTYMDTPQYLRRKVFPIMRELKHVGILPPLRTPHHPTGKPVTGEYRQGLTVKRVKKGTL 119

Query: 121 NNTTPFTVDYAKDEEIVIPIAHGEGNYYCDEETLAGLKANNQIVFTY-SDNPNGSVEHIA 179
            +     +   +++  V  I             +       +  +              +
Sbjct: 120 VDIGADKLALCREKLTVNRIMSFRVVRLGK--EILIEPDEPEDRYWGYEVLDTRRNLAES 177

Query: 180 GICNVQGNVVGMMPHPERAANSLLGSEDGKRMFTSILK 217
                   VV    +     + L   +   R       
Sbjct: 178 LKTVGADVVVATSRNASPITSILDEVKTRMRGAREAAI 215


>MTH1684_2 [C] COG1146 Ferredoxin
          Length = 268

 Score =  206 bits (523), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 11/218 (5%), Positives = 39/218 (17%), Gaps = 4/218 (1%)

Query: 1   MKFAVLVFPGSNCDIDCYKAVEDSLGEPVEYVWHTATDLSAYDCILVPGGFSYGDYLRCG 60
           M    L     +        ++    +    +   A+       ++              
Sbjct: 1   MNRVDLSIFIPDSLTAETGDLKIKTYKV-VLIARAASIFGVKRIVIYHDDADGEARFIRD 59

Query: 61  AISRFAPVMAEVAKAAEQGKFVLGICNGFQILTEAGLLPGALRRNMSMKFRCHDTVLKVV 120
            ++          K     + +  +     + T        +                 +
Sbjct: 60  ILTYMDTPQYLRRKVFPIMRELKHVGILPPLRTPHHPTGKPVTGEYRQGLTVKRVKKGTL 119

Query: 121 NNTTPFTVDYAKDEEIVIPIAHGEGNYYCDEETLAGLKANNQIVFTY-SDNPNGSVEHIA 179
            +     +   +++  V  I             +       +  +              +
Sbjct: 120 VDIGADKLALCREKLTVNRIMSFRVVRLGK--EILIEPDEPEDRYWGYEVLDTRRNLAES 177

Query: 180 GICNVQGNVVGMMPHPERAANSLLGSEDGKRMFTSILK 217
                   VV    +     + L   +   R       
Sbjct: 178 LKTVGADVVVATSRNASPITSILDEVKTRMRGAREAAI 215


>MTH1684_1 [S] COG1900 Uncharacterized conserved protein
          Length = 268

 Score =  206 bits (523), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 11/218 (5%), Positives = 39/218 (17%), Gaps = 4/218 (1%)

Query: 1   MKFAVLVFPGSNCDIDCYKAVEDSLGEPVEYVWHTATDLSAYDCILVPGGFSYGDYLRCG 60
           M    L     +        ++    +    +   A+       ++              
Sbjct: 1   MNRVDLSIFIPDSLTAETGDLKIKTYKV-VLIARAASIFGVKRIVIYHDDADGEARFIRD 59

Query: 61  AISRFAPVMAEVAKAAEQGKFVLGICNGFQILTEAGLLPGALRRNMSMKFRCHDTVLKVV 120
            ++          K     + +  +     + T        +                 +
Sbjct: 60  ILTYMDTPQYLRRKVFPIMRELKHVGILPPLRTPHHPTGKPVTGEYRQGLTVKRVKKGTL 119

Query: 121 NNTTPFTVDYAKDEEIVIPIAHGEGNYYCDEETLAGLKANNQIVFTY-SDNPNGSVEHIA 179
            +     +   +++  V  I             +       +  +              +
Sbjct: 120 VDIGADKLALCREKLTVNRIMSFRVVRLGK--EILIEPDEPEDRYWGYEVLDTRRNLAES 177

Query: 180 GICNVQGNVVGMMPHPERAANSLLGSEDGKRMFTSILK 217
                   VV    +     + L   +   R       
Sbjct: 178 LKTVGADVVVATSRNASPITSILDEVKTRMRGAREAAI 215


>MTH1687 [S] COG2454 Uncharacterized conserved protein
          Length = 268

 Score =  206 bits (523), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 11/218 (5%), Positives = 39/218 (17%), Gaps = 4/218 (1%)

Query: 1   MKFAVLVFPGSNCDIDCYKAVEDSLGEPVEYVWHTATDLSAYDCILVPGGFSYGDYLRCG 60
           M    L     +        ++    +    +   A+       ++              
Sbjct: 1   MNRVDLSIFIPDSLTAETGDLKIKTYKV-VLIARAASIFGVKRIVIYHDDADGEARFIRD 59

Query: 61  AISRFAPVMAEVAKAAEQGKFVLGICNGFQILTEAGLLPGALRRNMSMKFRCHDTVLKVV 120
            ++          K     + +  +     + T        +                 +
Sbjct: 60  ILTYMDTPQYLRRKVFPIMRELKHVGILPPLRTPHHPTGKPVTGEYRQGLTVKRVKKGTL 119

Query: 121 NNTTPFTVDYAKDEEIVIPIAHGEGNYYCDEETLAGLKANNQIVFTY-SDNPNGSVEHIA 179
            +     +   +++  V  I             +       +  +              +
Sbjct: 120 VDIGADKLALCREKLTVNRIMSFRVVRLGK--EILIEPDEPEDRYWGYEVLDTRRNLAES 177

Query: 180 GICNVQGNVVGMMPHPERAANSLLGSEDGKRMFTSILK 217
                   VV    +     + L   +   R       
Sbjct: 178 LKTVGADVVVATSRNASPITSILDEVKTRMRGAREAAI 215


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.321    0.137    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 17,549,913
Number of extensions: 692814
Number of successful extensions: 1237
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1236
Number of HSP's successfully gapped: 4
Length of query: 229
Length of database: 38,378,431
Length adjustment: 103
Effective length of query: 126
Effective length of database: 26,499,029
Effective search space: 3338877654
Effective search space used: 3338877654
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)