BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0437.0041.p
         (232 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SA2278 [LR] COG0494 NTP pyrophosphohydrolases including oxidativ...   146   2e-35
Cgl1127 [LR] COG0494 NTP pyrophosphohydrolases including oxidati...   138   6e-33
MA1602 [LR] COG0494 NTP pyrophosphohydrolases including oxidativ...    93   4e-19
Z2791 [LR] COG0494 NTP pyrophosphohydrolases including oxidative...    81   2e-15
ECs2465 [LR] COG0494 NTP pyrophosphohydrolases including oxidati...    81   2e-15

>SA2278 [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage
           repair enzymes
          Length = 673

 Score =  146 bits (369), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 10/118 (8%), Positives = 18/118 (15%)

Query: 1   MKKHIHVVGAVIIENEKILCAQRGASKALAYMWEFPGGKIEDDETPQSALKREIDEEMNC 60
           M+ +     AV       L      S     +       I         +          
Sbjct: 1   MRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAA 60

Query: 61  TIEIGEAIETTVHEYDFGFVHLTTFYCNLLKGTPTLTEHVAIQWLPANELMSLEWAPA 118
                   +T   +   G +  T     L                   +         
Sbjct: 61  REMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMKANFSLFDDTDQLALLK 118


>Cgl1127 [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage
           repair enzymes
          Length = 673

 Score =  138 bits (348), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 10/118 (8%), Positives = 18/118 (15%)

Query: 1   MKKHIHVVGAVIIENEKILCAQRGASKALAYMWEFPGGKIEDDETPQSALKREIDEEMNC 60
           M+ +     AV       L      S     +       I         +          
Sbjct: 1   MRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAA 60

Query: 61  TIEIGEAIETTVHEYDFGFVHLTTFYCNLLKGTPTLTEHVAIQWLPANELMSLEWAPA 118
                   +T   +   G +  T     L                   +         
Sbjct: 61  REMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMKANFSLFDDTDQLALLK 118


>MA1602 [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage
           repair enzymes
          Length = 673

 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 5/120 (4%), Positives = 18/120 (15%), Gaps = 4/120 (3%)

Query: 3   KHIHVVGAVIIENEKILCAQRGASKA--LAYMWEFPGGKIEDDETPQSALKREIDEEMNC 60
           +        +           GA          +            +         +   
Sbjct: 2   RLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAR 61

Query: 61  TIEIGEA--IETTVHEYDFGFVHLTTFYCNLLKGTPTLTEHVAIQWLPANELMSLEWAPA 118
            ++      +              T     + +    L            + ++L     
Sbjct: 62  EMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMKANFSLFDDTDQLALLKELT 121


>Z2791 [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage
           repair enzymes
          Length = 673

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 10/116 (8%), Positives = 30/116 (25%)

Query: 3   KHIHVVGAVIIENEKILCAQRGASKALAYMWEFPGGKIEDDETPQSALKREIDEEMNCTI 62
           +        +           GA      +       +      Q+     +        
Sbjct: 2   RLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAR 61

Query: 63  EIGEAIETTVHEYDFGFVHLTTFYCNLLKGTPTLTEHVAIQWLPANELMSLEWAPA 118
           E+ E +  T+   +   + ++TF+   L         + ++   +    + + A  
Sbjct: 62  EMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMKANFSLFDDTDQLALL 117


>ECs2465 [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage
           repair enzymes
          Length = 673

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 10/116 (8%), Positives = 30/116 (25%)

Query: 3   KHIHVVGAVIIENEKILCAQRGASKALAYMWEFPGGKIEDDETPQSALKREIDEEMNCTI 62
           +        +           GA      +       +      Q+     +        
Sbjct: 2   RLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAR 61

Query: 63  EIGEAIETTVHEYDFGFVHLTTFYCNLLKGTPTLTEHVAIQWLPANELMSLEWAPA 118
           E+ E +  T+   +   + ++TF+   L         + ++   +    + + A  
Sbjct: 62  EMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMKANFSLFDDTDQLALL 117


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.318    0.134    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 16,970,427
Number of extensions: 702264
Number of successful extensions: 3581
Number of sequences better than 1.0e-05: 29
Number of HSP's gapped: 3583
Number of HSP's successfully gapped: 29
Length of query: 232
Length of database: 38,378,431
Length adjustment: 103
Effective length of query: 129
Effective length of database: 26,499,029
Effective search space: 3418374741
Effective search space used: 3418374741
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)