BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0435.0003.p (335 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value lin2113 [C] COG0667 Predicted oxidoreductases (related to aryl-a... 425 e-119 yajO [C] COG0667 Predicted oxidoreductases (related to aryl-alco... 355 4e-98 ZyajO [C] COG0667 Predicted oxidoreductases (related to aryl-alc... 355 4e-98 ECs0473 [C] COG0667 Predicted oxidoreductases (related to aryl-a... 354 9e-98 >lin2113 [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Length = 346 Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust. Identities = 21/328 (6%), Positives = 65/328 (19%), Gaps = 6/328 (1%) Query: 9 MDYTKLGNTGLDVSRICLGCMGFGDPDKGHHRWVLDEKSARPIIQKALDIGINFFDTANV 68 M Y ++ ++ L+VS + LG M FG+ + + + I + Sbjct: 1 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPE 60 Query: 69 YAEGTSEEIVGNVLKELADRDEIVIATKIHGRMHQG-PNGAGLSRKAIMSEIDKSLKRLK 127 T + + K + I+ + + + + Sbjct: 61 TQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKR 120 Query: 128 TDYVDLYQIHRWDYNTPIEETIEALHDVVKAGKARYIGXXXXSAMWAWQFQKALHAAEKN 187 L P + + + A + + ++Q+A Sbjct: 121 LQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLL---DTLDALAEYQRAGKIRYIG 177 Query: 188 GWTRFVSMQNHLNLIYREEEREMLPLCKEEKIGVIPYSPLAGGRLARE--ASTPRAETDE 245 + + + + + + + +++ Sbjct: 178 VSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLG 237 Query: 246 IAKQKYXXXXXXXXXXXXXXXNLAEKHGVRRVHIALAWLLHKEPVTAPIVGATKITQLED 305 + A Sbjct: 238 FGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVR 297 Query: 306 AEAALSLKLTQEEISFLEEPYVPHRVVG 333 + ++ L + + + Sbjct: 298 RQPFVASTLLGATTMDQLKTNIESLHLE 325 >yajO [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Length = 346 Score = 355 bits (912), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 10/328 (3%), Positives = 43/328 (13%), Gaps = 7/328 (2%) Query: 8 KMDYTKLGNTGLDVSRICLGCMGFGDPDKGHHRWVLDEKSARPIIQKALDIGINFFDTAN 67 ++ + G + + + + Sbjct: 24 GEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLI 83 Query: 68 VYAEGTSEEIVGNVLKELADRDEIVIATKIHGRMHQGPNGAGLSRKAIMSEIDKSLKRLK 127 + ++ + + + + + + Sbjct: 84 IASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQ--TDYLDLYQVHWPQRPTNCF 141 Query: 128 TDYVDLYQIHRWDYNTPIEETIEALHDVVKAGKARYIGXXXXSAMWAWQFQKALHAAEKN 187 + + A + + + + L Sbjct: 142 GKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVS---NETAFGVMRYLHLADKHDL 198 Query: 188 GWTRFVSMQNHLNLIYREEEREMLPLCKEEKIGVIPYSPLAGGRLARE--ASTPRAETDE 245 + L E + + ++ A A Sbjct: 199 PRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTL 258 Query: 246 IAKQKYXXXXXXXXXXXXXXXNLAEKHGVRRVHIALAWLLHKEPVTAPIVGATKITQLED 305 ++ + + T + Sbjct: 259 FSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTN 318 Query: 306 AEAALSLKLTQEEISFLEEPYVPHRVVG 333 E+ V Sbjct: 319 IESLHLELSEDVLAEIEAVHQVYTYPAP 346 >ZyajO [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Length = 346 Score = 355 bits (912), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 10/328 (3%), Positives = 43/328 (13%), Gaps = 7/328 (2%) Query: 8 KMDYTKLGNTGLDVSRICLGCMGFGDPDKGHHRWVLDEKSARPIIQKALDIGINFFDTAN 67 ++ + G + + + + Sbjct: 24 GEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLI 83 Query: 68 VYAEGTSEEIVGNVLKELADRDEIVIATKIHGRMHQGPNGAGLSRKAIMSEIDKSLKRLK 127 + ++ + + + + + + Sbjct: 84 IASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQ--TDYLDLYQVHWPQRPTNCF 141 Query: 128 TDYVDLYQIHRWDYNTPIEETIEALHDVVKAGKARYIGXXXXSAMWAWQFQKALHAAEKN 187 + + A + + + + L Sbjct: 142 GKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVS---NETAFGVMRYLHLADKHDL 198 Query: 188 GWTRFVSMQNHLNLIYREEEREMLPLCKEEKIGVIPYSPLAGGRLARE--ASTPRAETDE 245 + L E + + ++ A A Sbjct: 199 PRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTL 258 Query: 246 IAKQKYXXXXXXXXXXXXXXXNLAEKHGVRRVHIALAWLLHKEPVTAPIVGATKITQLED 305 ++ + + T + Sbjct: 259 FSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTN 318 Query: 306 AEAALSLKLTQEEISFLEEPYVPHRVVG 333 E+ V Sbjct: 319 IESLHLELSEDVLAEIEAVHQVYTYPAP 346 Score = 354 bits (909), Expect = 9e-98, Method: Compositional matrix adjust. Identities = 26/327 (7%), Positives = 64/327 (19%), Gaps = 7/327 (2%) Query: 9 MDYTKLGNTGLDVSRICLGCMGFGDPDKGHHRWVLDEKSARPIIQKALDIGINFFDTANV 68 M Y ++ ++ L+VS + LG M FG+ + + + I + Sbjct: 1 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPE 60 Query: 69 YAEGTSEEIVGNVLKELADRDEIVIATKIHGRMHQGPNGAGLSRKAIMSEIDKSLKRLKT 128 T + + K + I+ + + +A+ + + Sbjct: 61 TQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKG--IRPDQALDRKNIREALHDSL 118 Query: 129 DYVDLYQIHRWDYNTPIEETIEALHDVVKAGKARYIGXXXXSAMWAWQFQKALHAAEKNG 188 + + + + P T + + A + Sbjct: 119 KRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAV---SLLDTLDALAEYQRAGKIRY 175 Query: 189 WTRFVSMQNHLNLIYREEEREMLPLCKEEKIGVIPYSPLAGGRLARE--ASTPRAETDEI 246 + ++ LP + + LA Sbjct: 176 IGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSC 235 Query: 247 AKQKYXXXXXXXXXXXXXXXNLAEKHGVRRVHIALAWLLHKEPVTAPIVGATKITQLEDA 306 N R + A G Sbjct: 236 LGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAF 295 Query: 307 EAALSLKLTQEEISFLEEPYVPHRVVG 333 + + + + Sbjct: 296 VRRQPFVASTLLGATTMDQLKTNIESL 322 >ECs0473 [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Length = 346 Score = 354 bits (909), Expect = 9e-98, Method: Compositional matrix adjust. Identities = 26/327 (7%), Positives = 64/327 (19%), Gaps = 7/327 (2%) Query: 9 MDYTKLGNTGLDVSRICLGCMGFGDPDKGHHRWVLDEKSARPIIQKALDIGINFFDTANV 68 M Y ++ ++ L+VS + LG M FG+ + + + I + Sbjct: 1 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPE 60 Query: 69 YAEGTSEEIVGNVLKELADRDEIVIATKIHGRMHQGPNGAGLSRKAIMSEIDKSLKRLKT 128 T + + K + I+ + + +A+ + + Sbjct: 61 TQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKG--IRPDQALDRKNIREALHDSL 118 Query: 129 DYVDLYQIHRWDYNTPIEETIEALHDVVKAGKARYIGXXXXSAMWAWQFQKALHAAEKNG 188 + + + + P T + + A + Sbjct: 119 KRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAV---SLLDTLDALAEYQRAGKIRY 175 Query: 189 WTRFVSMQNHLNLIYREEEREMLPLCKEEKIGVIPYSPLAGGRLARE--ASTPRAETDEI 246 + ++ LP + + LA Sbjct: 176 IGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSC 235 Query: 247 AKQKYXXXXXXXXXXXXXXXNLAEKHGVRRVHIALAWLLHKEPVTAPIVGATKITQLEDA 306 N R + A G Sbjct: 236 LGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAF 295 Query: 307 EAALSLKLTQEEISFLEEPYVPHRVVG 333 + + + + Sbjct: 296 VRRQPFVASTLLGATTMDQLKTNIESL 322 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.318 0.135 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 24,310,269 Number of extensions: 991833 Number of successful extensions: 39209 Number of sequences better than 1.0e-05: 6335 Number of HSP's gapped: 8036 Number of HSP's successfully gapped: 6335 Length of query: 335 Length of database: 38,378,431 Length adjustment: 107 Effective length of query: 228 Effective length of database: 26,037,693 Effective search space: 5936594004 Effective search space used: 5936594004 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 116 (49.3 bits)