BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0430.0010.p (1310 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value YPO0762 [M] COG3209 Rhs family protein 144 8e-34 ECs0605 [M] COG3209 Rhs family protein 140 2e-32 PA2684 [M] COG3209 Rhs family protein 132 4e-30 RSp0151 [M] COG3209 Rhs family protein 128 7e-29 STM0291 [M] COG3209 Rhs family protein 126 3e-28 >YPO0762 [M] COG3209 Rhs family protein Length = 1438 Score = 144 bits (364), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 163/644 (25%), Positives = 248/644 (38%), Gaps = 98/644 (15%) Query: 103 YDQKDRAVAVTNALDQTSSVTYDANGNPVEHTNEAGSKTVSNYQVYRLSSTEDALQNSTT 162 +D + +A +A + Y A+ V HT+ G YQ Sbjct: 495 HDGEGNLIATLDADNHPYQFEYIADSQMVRHTDRNGLSFYYRYQ---------------- 538 Query: 163 KTYDALGRVIEAKDEAGAVT-AYNYDSVGQLEEVTDAEGQSNTYTYDDNGNMLTQKDAKG 221 + D L RV A + G ++YD V Q ++TD+ G + YD+ G + Sbjct: 539 RHSDGLDRVEHAWGDGGLFDYRFHYDRVYQETQITDSLGHTTLLRYDERGLPFAR----- 593 Query: 222 NITSYTYSKRNELLSVTDPLGAKTRYRYDAAGNTIKETDALGNSTYYDYNALGQLVKVTD 281 PLG Y+YDA TI E D GN+ + Y+ L + T Sbjct: 594 ----------------VTPLGGVYSYQYDAQCRTIAEIDPAGNTHGWMYDQYANLTEETF 637 Query: 282 ALGAVTEYQYDKNGNQVAVIDPNHSIWTTKYDSRSLDAGTINPLKEETAVTRNARGLMTE 341 A + + +Y + V + DP W +D++ P K T T + G + Sbjct: 638 ADRSSVKTEYGDDHKPVRITDPGGRFWRQSWDAQGKVISQTTPGKIATHFTYDDLGQLVA 697 Query: 342 FLDAAGQKTTYEYDALGRNTRVRNALGYETIYAYDAQGNVEKIVNANHHETAFTYDPLGR 401 +DA+ Q+T YDA G + +A G T + +D GN+ K V AN T + YD R Sbjct: 698 VVDASQQRTELAYDAWGFLRVITDARGNATSFKHDFCGNLLKKVAANGDITRYQYDKKQR 757 Query: 402 LTEVKNAEGSTTKYSYDASGNLLDKTNALGAVTSYRYDTLNRVIESVNPLQEITSLAYDE 461 LT + T + YD NLL N G+ IT Y Sbjct: 758 LTGCTLPDARTIRCEYDREDNLL-LYNENGS--------------------RITRFGYFG 796 Query: 462 NGNLQKVTEPDSNTTVYAYNKGNQVEQIQYGNDLTVKYKYDLAGRRSLMTDSTGDT-RYT 520 G LQ T+PD + T Y Y+ Q+ ++ T + K + GR D G + RY Sbjct: 797 QGRLQSRTDPDGSLTEYLYDTEEQLIGVKNQRGKTWQLKRNAEGRLIEEVDYWGQSRRYQ 856 Query: 521 YDALNRPTSVIDPRGNNVRYEWTATGQRSRIIYPDNTVVSYDYDKLDRI--KQVTDAQNG 578 Y+A+ T DP G +++ DKL RI K + + Sbjct: 857 YNAVGHLTGSHDPLGQ---------------------ILAVTCDKLGRITEKNIAGDEQA 895 Query: 579 ITSYLYDAAGRLKEKLLPNKGQSTYSYDGAGQLLEMKHTAPGGALLEQLTYVYDPAGNKI 638 Y Y+ G+L + P T Y+ GQL + P + + Y Y+ AG ++ Sbjct: 896 WERYEYNVQGQLIGAVNPAV-TVTRRYNQDGQLAQEIQQQP--QVSATVEYGYNAAGQQV 952 Query: 639 RSERQEGGSDEDNPAGTPRPADIADYAYDALNQLVQVQKQNGSRVVYSYDTVGNRLGKET 698 +DED+ R Y YD L Q + Q + + +SYD +G + Sbjct: 953 EQRHLLQYADEDDIQVQQR----IRYGYDVLGQCISQQIDDHRPMAFSYDKIGRLTEQRL 1008 Query: 699 TGAGTTIKELYTYDAANKLTHFE---KGSDYK--DYTYDKRGNL 737 T ++ Y AA +L ++ KG + DY YD+ GNL Sbjct: 1009 T---PSLSHHLRYSAAGQLAGYQTRRKGMVWSETDYFYDQHGNL 1049 Score = 144 bits (363), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 164/642 (25%), Positives = 249/642 (38%), Gaps = 95/642 (14%) Query: 9 DALGNRATYEYDTAGNLVKSTDALGGVVTIARDSAGVPVSVTDAEGHTTAYTND--ADGF 66 D+LG+ YD G LGGV + D+ ++ D G+T + D A+ Sbjct: 574 DSLGHTTLLRYDERGLPFARVTPLGGVYSYQYDAQCRTIAEIDPAGNTHGWMYDQYANLT 633 Query: 67 AKEIKDPSGYTTIIERDTLHRTTKITDAEGKLQAVDYDQKDRAVAVTNALDQTSSVTYDA 126 + D S T D H+ +ITD G+ +D + + ++ T + TYD Sbjct: 634 EETFADRSSVKTEYGDD--HKPVRITDPGGRFWRQSWDAQGKVISQTTPGKIATHFTYDD 691 Query: 127 NGNPVEHTNEAGSKTVSNYQVY-RLSSTEDALQNSTTKTYDALGRVIEAKDEAGAVTAYN 185 G V + + +T Y + L DA N+T+ +D G +++ G +T Y Sbjct: 692 LGQLVAVVDASQQRTELAYDAWGFLRVITDARGNATSFKHDFCGNLLKKVAANGDITRYQ 751 Query: 186 YDSVGQLEEVTDAEGQSNTYTYDDNGNMLTQKDAKGNITSYTYSKRNELLSVTDPLGAKT 245 YD +L T + ++ YD N+L + IT + Y + L S TDP G+ T Sbjct: 752 YDKKQRLTGCTLPDARTIRCEYDREDNLLLYNENGSRITRFGYFGQGRLQSRTDPDGSLT 811 Query: 246 RYRYD---------------------AAGNTIKETDALGNSTYYDYNALGQLVKVTDALG 284 Y YD A G I+E D G S Y YNA+G L D LG Sbjct: 812 EYLYDTEEQLIGVKNQRGKTWQLKRNAEGRLIEEVDYWGQSRRYQYNAVGHLTGSHDPLG 871 Query: 285 AVTEYQYDKNGNQVAV-IDPNHSIWTT-KYDSRSLDAGTINPLKEETAVTR--NARGLMT 340 + DK G I + W +Y+ + G +NP VTR N G + Sbjct: 872 QILAVTCDKLGRITEKNIAGDEQAWERYEYNVQGQLIGAVNP---AVTVTRRYNQDGQLA 928 Query: 341 EFLDAAGQKTT---YEYDALGRNTRVRNALGY----------ETIYAYDAQGNVEKIVNA 387 + + Q + Y Y+A G+ R+ L Y Y YD G Sbjct: 929 QEIQQQPQVSATVEYGYNAAGQQVEQRHLLQYADEDDIQVQQRIRYGYDVLGQCISQQID 988 Query: 388 NHHETAFTYDPLGRLTEVK-----------NAEG--------------STTKYSYDASGN 422 +H AF+YD +GRLTE + +A G S T Y YD GN Sbjct: 989 DHRPMAFSYDKIGRLTEQRLTPSLSHHLRYSAAGQLAGYQTRRKGMVWSETDYFYDQHGN 1048 Query: 423 LLDKTNALGAVTSYRYDTLNRVIESVNPLQEITSLAYDENG--------NLQKVTEPDSN 474 L + ++ Y YD L +++ +PL + YD G N + N Sbjct: 1049 LTQREDSRQGSERYHYDVLGQIVGYQDPLGTLHRYRYDACGDRFSTVADNAEGRHTQQDN 1108 Query: 475 TTVYAYNKGNQ-VEQIQYGNDLTVKYKYDLAGRRSLMTDSTGDTRYTYDA---------L 524 T Y +K Q V + + L + +++ GR + + + D YTYDA L Sbjct: 1109 GTAYQLDKAGQLVSRTDRFSQLAL--RWNTFGRLAGIKNEHHDHAYTYDALGRRVGKRHL 1166 Query: 525 NRPTSVIDPRGNNVRYEWTATGQRSRIIYPDNTVVSYDYDKL 566 RPT ++D +R T R ++ D T +D D + Sbjct: 1167 QRPTKLLD----GLRVIDKETPSRGEPVWQDETWFMWDGDVM 1204 Score = 139 bits (349), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 188/760 (24%), Positives = 295/760 (38%), Gaps = 167/760 (21%) Query: 17 YEYDTAGNLVKSTDALGGVVTIARDSAGVPVSVTDAEGHTT--AYTNDADGFAK---EIK 71 Y +D GNL+ + DA + V TD G + Y +DG + Sbjct: 493 YRHDGEGNLIATLDADNHPYQFEYIADSQMVRHTDRNGLSFYYRYQRHSDGLDRVEHAWG 552 Query: 72 DPSGYTTIIERDTLHRTTKITDAEGKLQAVDYDQKDRAVAVTNALDQTSSVTYDANGNPV 131 D + D +++ T+ITD+ G + YD++ A L S YDA + Sbjct: 553 DGGLFDYRFHYDRVYQETQITDSLGHTTLLRYDERGLPFARVTPLGGVYSYQYDAQCRTI 612 Query: 132 EHTNEAGSKTVSNYQVYRLSSTEDALQNSTTKT----------------------YDALG 169 + AG+ Y Y + E S+ KT +DA G Sbjct: 613 AEIDPAGNTHGWMYDQYANLTEETFADRSSVKTEYGDDHKPVRITDPGGRFWRQSWDAQG 672 Query: 170 RVIEAKDEAGAVTAYNYDSVGQ---------------------LEEVTDAEGQSNTYTYD 208 +VI T + YD +GQ L +TDA G + ++ +D Sbjct: 673 KVISQTTPGKIATHFTYDDLGQLVAVVDASQQRTELAYDAWGFLRVITDARGNATSFKHD 732 Query: 209 DNGNMLTQKDAKGNITSYTYSKRNELLSVTDPLGAKTRYRYDAAGNTIKETDALGNSTYY 268 GN+L + A G+IT Y Y K+ L T P R YD N + + T + Sbjct: 733 FCGNLLKKVAANGDITRYQYDKKQRLTGCTLPDARTIRCEYDREDNLLLYNENGSRITRF 792 Query: 269 DYNALGQLVKVTDALGAVTEYQYDKNGNQVAVIDPNHSIWTTKYDSRSLDAGTINPLKEE 328 Y G+L TD G++TEY YD + V + W K Sbjct: 793 GYFGQGRLQSRTDPDGSLTEYLYDTEEQLIGVKNQRGKTWQLK----------------- 835 Query: 329 TAVTRNARGLMTEFLDAAGQKTTYEYDALGRNTRVRNALGYETIYAYDAQGNVEKIVNAN 388 RNA G + E +D GQ Y+Y+A+G T + LG +I+ Sbjct: 836 ----RNAEGRLIEEVDYWGQSRRYQYNAVGHLTGSHDPLG--------------QIL--- 874 Query: 389 HHETAFTYDPLGRLTEVKNAEGSTTKYSYDASGNLLDKTNALGAVTSYRYDTLNRVIESV 448 A T D LGR+TE KN G + Y Y+ ++I +V Sbjct: 875 ----AVTCDKLGRITE-KNIAGDEQAWE------------------RYEYNVQGQLIGAV 911 Query: 449 NPLQEITSLAYDENGNL-QKV-TEPDSNTTV-YAYN-KGNQVEQ---IQYGND------L 495 NP +T Y+++G L Q++ +P + TV Y YN G QVEQ +QY ++ Sbjct: 912 NPAVTVTR-RYNQDGQLAQEIQQQPQVSATVEYGYNAAGQQVEQRHLLQYADEDDIQVQQ 970 Query: 496 TVKYKYDLAGRR-SLMTDSTGDTRYTYDALNRPTS--VIDPRGNNVRYEWTATGQRSRII 552 ++Y YD+ G+ S D ++YD + R T + +++RY +A GQ Sbjct: 971 RIRYGYDVLGQCISQQIDDHRPMAFSYDKIGRLTEQRLTPSLSHHLRY--SAAGQ----- 1023 Query: 553 YPDNTVVSYDYDKLDRIKQVTDAQNGITSYLYDAAGRLKEKLLPNKGQSTYSYDGAGQLL 612 + Y + + TD Y YD G L ++ +G Y YD GQ++ Sbjct: 1024 -----LAGYQTRRKGMVWSETD-------YFYDQHGNLTQREDSRQGSERYHYDVLGQIV 1071 Query: 613 EMKHTAPGGALLEQLTYVYDPAGNKI---------RSERQEGGSD-EDNPAG-----TPR 657 + P G L Y YD G++ R +Q+ G+ + + AG T R Sbjct: 1072 --GYQDPLGTLHR---YRYDACGDRFSTVADNAEGRHTQQDNGTAYQLDKAGQLVSRTDR 1126 Query: 658 PADIADYAYDALNQLVQVQKQNGSRVVYSYDTVGNRLGKE 697 + +A ++ +L ++ ++ Y+YD +G R+GK Sbjct: 1127 FSQLA-LRWNTFGRLAGIKNEHHDH-AYTYDALGRRVGKR 1164 >ECs0605 [M] COG3209 Rhs family protein Length = 1616 Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 150/592 (25%), Positives = 240/592 (40%), Gaps = 34/592 (5%) Query: 83 DTLHRTTKITDAEGKLQAVDYDQKDRAVAVTNALDQTSSVTYDANGN-PVEHTNEAGSKT 141 D ++ ++D + D + R V++ +TY A+G H + G +T Sbjct: 532 DRMYMLGGMSDTASNRITFERDTQYRITGVSHTDGIRLKLTYHASGYLKAIHRTDNGIQT 591 Query: 142 VSNYQVYRLSSTEDA-LQNSTTKTYDALGRVIEAKDEAGAVTAYNYDSVGQLEEVTDAEG 200 ++ Y+ +DA L YDA R+I D + + YD+ G+ VT AEG Sbjct: 592 LATYE-------QDARLDYHLFYEYDAADRIIRWSDNDQTWSRFTYDAQGRCVTVTGAEG 644 Query: 201 QSNTYTYDDNGNMLTQKDAKGNITSYTYSKRNELLSVTDPLGAKTRYRYDAAGNTIKETD 260 N T D T D KG I Y Y +L P G+ T Y +D + + Sbjct: 645 YYNA-TLDYGDGCTTVTDGKG-IHRYYYDPDGNILREEAPDGSTTTYEWDEFHHLLARHS 702 Query: 261 ALGNSTYYDYNAL-GQLVKVTDALGAVTEYQYDKNGNQVAVIDPNHSIWTTKYDSRSLDA 319 G ++YNA GQL + T A GA +Y YD+ G + P WT + D R L Sbjct: 703 PAGRVEKFEYNAAHGQLSRYTAADGADWQYCYDERGLLSNITAPAGQTWTQQCDERGLPV 762 Query: 320 GTINPLKEETAVTRNARGLMTEFLDAAGQKTTYEYDALGRNTRVRNALGYETIYAYDAQG 379 ++P EET + +GL++ ++ EYD + + +G E Y Sbjct: 763 SLVSPQGEETRLAYTPQGLLSGIFRQDERRLGIEYDHHNWPETLTDVMGREHHTEYSGHD 822 Query: 380 NVEKIVNANHHETAFTYDPLGRLTEVKNAEGSTTKYSYDASGNLLDKTNALGAVTSYRYD 439 K+ + +L+ ++ A + YD GNLL T+ G V + Y Sbjct: 823 LPVKMRGPGGQSVRLQWQQHHKLSGLERAGTGAEGFRYDRHGNLLAYTDGNGVVWTMEYG 882 Query: 440 TLNRVIESVNPLQEITSLAYDENG-NLQKVTEPDSNTTVYAY-NKGNQVEQIQYGNDLTV 497 + + + YD++ L +V P + +Y N G E+ +G + Sbjct: 883 PFDLPVARTDGEGHRWQYRYDKDTLQLTEVINPQGESYLYILDNCGRVTEERDWGG-VVC 941 Query: 498 KYKYDLAGRRSLMTDSTGDT-RYTYDALNRPTSVIDPRGNNVRYEWTATGQRSRIIYPDN 556 +Y+YD G + + +T Y+ DA R VI P G +Y + +G+ + I PD Sbjct: 942 RYRYDADGLCTARVNGLEETILYSRDAAGRLAEVITPEG-KTQYAYDKSGRLTGIFSPDG 1000 Query: 557 TVVSYDYDKLDRIKQVTDAQNGITSYLYDAAGRLKEKLLPNKG----------QSTYSYD 606 T YD+ R+ T + I + D ++ L P ++TY Y+ Sbjct: 1001 TSQRTGYDERGRVNVTTQGRRAIEYHYPDEHTVIRCILPPEDERDRHPDGSLLKTTYRYN 1060 Query: 607 GAGQLLEMKHTAPGGALLEQLTYVYDPAGNKIRSERQEGGSDED--NPAGTP 656 AG+L E+ PG E LT+ D AG ++ G + E N AG P Sbjct: 1061 AAGELTEV--ILPGD---ETLTFSRDEAGREVLRHSNRGFACEQGWNAAGQP 1107 Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 172/737 (23%), Positives = 263/737 (35%), Gaps = 116/737 (15%) Query: 17 YEYDTAGNLVKSTDALGGVVTIARDSAGVPVSVTDAEGHTTA------------------ 58 YEYD A +++ +D D+ G V+VT AEG+ A Sbjct: 607 YEYDAADRIIRWSDNDQTWSRFTYDAQGRCVTVTGAEGYYNATLDYGDGCTTVTDGKGIH 666 Query: 59 -YTNDADGFAKEIKDPSGYTTIIERDTLHRTTKITDAEGKLQAVDYDQKDRAVAVTNALD 117 Y D DG + P G TT E D H G+++ +Y+ ++ A D Sbjct: 667 RYYYDPDGNILREEAPDGSTTTYEWDEFHHLLARHSPAGRVEKFEYNAAHGQLSRYTAAD 726 Query: 118 QTS-SVTYDANGNPVEHTNEAGSKTVSNYQVYRLSSTEDALQNSTTK---TYDALGRVIE 173 YD G T AG L + + Q T+ T L I Sbjct: 727 GADWQYCYDERGLLSNITAPAGQTWTQQCDERGLPVSLVSPQGEETRLAYTPQGLLSGIF 786 Query: 174 AKDEAGAVTAYNYDSVGQLEEVTDAEGQSNTYTYDDNGNMLTQKDAKGNITSYTYSKRNE 233 +DE YD E +TD G+ + Y + + + G + + ++ Sbjct: 787 RQDE--RRLGIEYDHHNWPETLTDVMGREHHTEYSGHDLPVKMRGPGGQSVRLQWQQHHK 844 Query: 234 LLSVTDPLGAKTRYRYDAAGNTIKETDALGNSTYYDYNALGQLVKVTDALGAVTEYQYDK 293 L + +RYD GN + TD G +Y V TD G +Y+YDK Sbjct: 845 LSGLERAGTGAEGFRYDRHGNLLAYTDGNGVVWTMEYGPFDLPVARTDGEGHRWQYRYDK 904 Query: 294 NGNQVAVIDPNHSIWTTKYDSRSLDAGTINPLKEETAVTRNARGLMTEFLDAAGQKTTYE 353 + Q+ + INP E + G +TE D G Y Sbjct: 905 DTLQLTEV--------------------INPQGESYLYILDNCGRVTEERDWGGVVCRYR 944 Query: 354 YDALGRNTRVRNALGYETIYAYDAQGNVEKIVNANHHETAFTYDPLGRLTEVKNAEGSTT 413 YDA G T N L +Y+ DA G + +++ +T + YD GRLT + + +G++ Sbjct: 945 YDADGLCTARVNGLEETILYSRDAAGRLAEVITPE-GKTQYAYDKSGRLTGIFSPDGTSQ 1003 Query: 414 KYSYDASGNLLDKTNALGAVTSYRYDTLNRVIESVNPLQEITSLAYDENGNLQKVTEPDS 473 + YD G + T A+ Y Y + VI + P ++ ++ PD Sbjct: 1004 RTGYDERGRVNVTTQGRRAI-EYHYPDEHTVIRCILPPED------------ERDRHPDG 1050 Query: 474 N--TTVYAYNKGNQVEQIQYGNDLTVKYKYDLAGRRSLMTDSTG-DTRYTYDALNRPTS- 529 + T Y YN ++ ++ D T+ + D AGR L + G ++A +P S Sbjct: 1051 SLLKTTYRYNAAGELTEVILPGDETLTFSRDEAGREVLRHSNRGFACEQGWNAAGQPVSQ 1110 Query: 530 -------------VIDPRGNNVRYE--WTATGQRSRIIYPDNTVVSYDYDKLDRIKQVTD 574 ++ RY+ +G SR Y T Y +LDR QVT Sbjct: 1111 RAGLFPAEATWGGLLPSLLREYRYDSAGNVSGVTSREDYGRETHREY---RLDRNGQVTA 1167 Query: 575 AQNGITSYLYDAAGRLKEKLLPNKGQSTYSYDGAGQLLEM---KHTAPG-------GALL 624 T Y +G TY YD G L +H G G L Sbjct: 1168 VTASGTGLGY------------GEGDETYGYDSCGYLKAQSAGRHRISGETDQYAAGHRL 1215 Query: 625 EQL---TYVYDPAGNKIRSERQEGGSDEDNPAGTPRPADIADYAYDALNQLVQVQKQNGS 681 +Q Y YD AG + + G RP + + +D+ +QL + G Sbjct: 1216 KQAGNTQYDYDAAGRMVSRTKHRDGY---------RP-ETERFRWDSRDQLTGYRSAQGE 1265 Query: 682 RVVYSYDTVGNRLGKET 698 + Y +D G R K Sbjct: 1266 QWEYRHDASGRRTEKRC 1282 Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 152/625 (24%), Positives = 230/625 (36%), Gaps = 95/625 (15%) Query: 17 YEYDTAGNLVKSTDALGGVVTIARDSAGVPVSVTDAEGHTT--AYTNDADGFAKEIKDPS 74 Y YD G L T G T D G+PVS+ +G T AYT P Sbjct: 732 YCYDERGLLSNITAPAGQTWTQQCDERGLPVSLVSPQGEETRLAYT------------PQ 779 Query: 75 GYTTIIERDTLHRTTKITDAEGKLQAVDYDQKDRAVAVTNALDQTSSVTYDANGNPVEHT 134 G + I R R ++YD + +T+ + + Y + PV+ Sbjct: 780 GLLSGIFRQDERRL-----------GIEYDHHNWPETLTDVMGREHHTEYSGHDLPVKMR 828 Query: 135 NEAGSKTVSNYQV-YRLSSTEDALQNSTTKTYDALGRVIEAKDEAGAVTAYNYDSVGQLE 193 G +Q ++LS E A + YD G ++ D G V Y Sbjct: 829 GPGGQSVRLQWQQHHKLSGLERAGTGAEGFRYDRHGNLLAYTDGNGVVWTMEYGPFDLPV 888 Query: 194 EVTDAEGQSNTYTYDDNGNMLTQK-DAKGNITSYTYSKRNELLSVTDPLGAKTRYRYDAA 252 TD EG Y YD + LT+ + +G Y + D G RYRYDA Sbjct: 889 ARTDGEGHRWQYRYDKDTLQLTEVINPQGESYLYILDNCGRVTEERDWGGVVCRYRYDAD 948 Query: 253 GNTIKETDALGNSTYYDYNALGQLVKVTDALGAVTEYQYDKNGNQVAVIDPNHSIWTTKY 312 G + L + Y +A G+L +V G T+Y YDK+G + P+ + T Y Sbjct: 949 GLCTARVNGLEETILYSRDAAGRLAEVITPEGK-TQYAYDKSGRLTGIFSPDGTSQRTGY 1007 Query: 313 DSRSLDAGTINPLKEETAVTRNARGLMTEFLDAAGQKTTYEYDALGRNTRVRNALG--YE 370 D R G +N T+ R + + D + T + R R+ G + Sbjct: 1008 DER----GRVN------VTTQGRRAIEYHYPD---EHTVIRCILPPEDERDRHPDGSLLK 1054 Query: 371 TIYAYDAQGNVEKIVNANHHETAFTYDPLGRLTEVKNAEGSTTKYSYDASGNLLDKTNAL 430 T Y Y+A G + +++ F+ D GR + G + ++A+G + + L Sbjct: 1055 TTYRYNAAGELTEVILPGDETLTFSRDEAGREVLRHSNRGFACEQGWNAAGQPVSQRAGL 1114 Query: 431 ------------GAVTSYRYDTLNRV--IESVNPLQEITSLAY--DENGNLQKVTEPDSN 474 + YRYD+ V + S T Y D NG + VT ++ Sbjct: 1115 FPAEATWGGLLPSLLREYRYDSAGNVSGVTSREDYGRETHREYRLDRNGQVTAVT---AS 1171 Query: 475 TTVYAYNKGNQVEQIQYGNDLTVKYKYDLAGRRSLMTDS-----------TGDTRYTYDA 523 T Y +G++ YG D K AGR + ++ G+T+Y YDA Sbjct: 1172 GTGLGYGEGDET----YGYDSCGYLKAQSAGRHRISGETDQYAAGHRLKQAGNTQYDYDA 1227 Query: 524 LNRPTSVIDPRGNNVRYEWTATGQRSRIIYPDNTVVSYDYDKLDRIKQVTDAQNGITSYL 583 R S R + R E + +D D++ AQ Y Sbjct: 1228 AGRMVSRTKHR-DGYRPE----------------TERFRWDSRDQLTGYRSAQGEQWEYR 1270 Query: 584 YDAAGRLKEKLLPNKG-QSTYSYDG 607 +DA+GR EK K + TY +DG Sbjct: 1271 HDASGRRTEKRCDRKKIRFTYLWDG 1295 >PA2684 [M] COG3209 Rhs family protein Length = 1317 Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 187/768 (24%), Positives = 287/768 (37%), Gaps = 127/768 (16%) Query: 17 YEYDTAGNLVKSTDALGGVVTIARDSAGVPVSVTDAEGHTTAYTNDADGFAKEIKDPSGY 76 Y++ +G+L+ D LG VV + + V+ + G Y D + P G Sbjct: 270 YQFSDSGDLIAVRDRLGQVVRVFAWREHMLVAHGEPGGLEVRYEWD-------VHAPHG- 321 Query: 77 TTIIERDTLHRTTKITDAEGKLQAVDYDQKDRAVAVTNALDQTSSVTYDANGNPVEHT-- 134 R K +A G + Y + A V+++L + + G T Sbjct: 322 ----------RVVKQIEAGGLTRTFRYLRD--ATEVSDSLGRVERYEFAGEGGQRRWTAL 369 Query: 135 -NEAGSKTVSNYQVY-RLSSTEDALQNSTTKTYDALGRVIEAKDEAGAVTAYNYD-SVGQ 191 GS++ +Y ++ RL + D L T + D GR++E + A D G Sbjct: 370 VRADGSRSEFDYDLFGRLVAMRDPLGRETRRRRDGQGRMLEEESPGKARYRKRVDEETGL 429 Query: 192 LEEVTDAEGQSNTYTYDDNGNMLTQKDAKGNITSYTYSK---RNELLSVTDPLGAKTRYR 248 L E+ DA + T+ D+ GN T + G+ T Y Y + + DP G + R Sbjct: 430 LVELEDAMQRRWTFERDERGNATTVRGPAGS-TRYAYEDPRLPDRPTRIVDPRGGERRLE 488 Query: 249 YDAAGNTIKETDALGNSTYYDYNALGQLVKVTDALGAVTEYQYDKNGNQVAVIDPNHSIW 308 ++ G TD G YDY+ G+LV +D LG +T +YD G + + + S Sbjct: 489 WNRFGLLAALTDCSGQVWRYDYDNEGRLVASSDPLGQLTRRRYDPLGQLIGLELADGSAL 548 Query: 309 TTKYDSRSLDAGTINPLKEETAVTRNARGLMTEFLDAAGQKTTYEYDALGRNTRVRNALG 368 + +YD A G T DA G T + + RV +A G Sbjct: 549 SYEYD---------------------ALGRQTRIADAEGHATLFSWGHGDLLARVSDAGG 587 Query: 369 YETIYAYDAQGNVEKIVNANHHETAFTYDPLGRLTEVKNAEGSTTKYSYDASGNLLDKTN 428 E Y +D G + + N N + F YD L RL E +G +Y Y+A+ L+ + + Sbjct: 588 GELSYLHDEAGRLVALTNENGVQAQFRYDLLDRLVEETGFDGRRQRYRYNAADELIARED 647 Query: 429 ALGAVTSYRYDTLNRVIESVNPLQEIT-------------SLA------------YDENG 463 A G T+Y YD R+ P E LA YDE G Sbjct: 648 ADGRETTYAYDRDGRLASIRVPATEHAPALVERYRWLADGRLASAGGADCEVRYTYDEVG 707 Query: 464 NLQKVTEPDSNTTVYA---------------YNKGNQVEQIQYG---------NDLTVKY 499 NL+ ++ ++ VY+ Y V + YG + + + Sbjct: 708 NLRLESQVHADGWVYSVEHSHDALGVRQTSRYGDAPPVAWLTYGPGHLHGALVGAVELAF 767 Query: 500 KYDLAG---RRSLMTDSTGDTRYTYDALNRPTSVIDPRGNNVRYEWTATGQRSRIIYPD- 555 + D RR D D +T + + P + QRSR+ Sbjct: 768 ERDALHREVRRDARRDGQDDALFTQERQHAPLGRL---------------QRSRLRLAGG 812 Query: 556 -NTVVSYDYDKLDRIKQVTDAQNGITSYLYDAAGRLKEKLLPNKGQSTYSYDGAGQLLE- 613 + Y YD L ++ + D Q Y YD GRL STY YD AG LE Sbjct: 813 FDWQRGYRYDGLGQLVGIDDNQYPSVRYEYDLGGRLLASRRAGAAASTYRYDAAGNRLEG 872 Query: 614 -MKHTAPGGALLEQLTYVYDPAGNKIRSERQEGGSDEDNPAGTPRPADIAD--YAYDALN 670 +H +Y ++ + + G AG R IA Y +DAL Sbjct: 873 VGEHAREDARQAFAENELYRSGFSRSETRASQAGEGPARWAGN-RVERIAGNRYRFDALG 931 Query: 671 QLVQVQKQNGSRVVYSYDTVGNRLGKETT--GAGTTIKELYTYDAANK 716 LV+ +G R+ +YD RL T GT ++ Y YDA ++ Sbjct: 932 NLVERIGADGERLRLAYDGA-QRLVHLTRDYADGTRLEARYRYDALSR 978 Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 156/649 (24%), Positives = 253/649 (38%), Gaps = 135/649 (20%) Query: 8 IDALGNRATYEYDTAGNLVKSTDALGGVVTIARDS----------------------AGV 45 + A G+R+ ++YD G LV D LG RD G+ Sbjct: 370 VRADGSRSEFDYDLFGRLVAMRDPLGRETRRRRDGQGRMLEEESPGKARYRKRVDEETGL 429 Query: 46 PVSVTDAEGHTTAYTNDADGFAKEIKDPSGYTTIIERDTL--HRTTKITDAEGKLQAVDY 103 V + DA + D G A ++ P+G T D R T+I D G + +++ Sbjct: 430 LVELEDAMQRRWTFERDERGNATTVRGPAGSTRYAYEDPRLPDRPTRIVDPRGGERRLEW 489 Query: 104 DQKDRAVAVTNALDQTSSVTYDANGNPVEHTNEAGSKTVSNYQVYRLSSTEDALQNSTTK 163 ++ A+T+ Q YD G RL ++ D L T + Sbjct: 490 NRFGLLAALTDCSGQVWRYDYDNEG--------------------RLVASSDPLGQLTRR 529 Query: 164 TYDALGRVIEAKDEAGAVTAYNYDSVGQLEEVTDAEGQSNTYTYDDNGNMLTQ-KDAKGN 222 YD LG++I + G+ +Y YD++G+ + DAEG + +++ +G++L + DA G Sbjct: 530 RYDPLGQLIGLELADGSALSYEYDALGRQTRIADAEGHATLFSWG-HGDLLARVSDAGGG 588 Query: 223 ITSYTYSKRNELLSVTDPLGAKTRYRYDAAGNTIKETDALGNSTYYDYNALGQLVKVTDA 282 SY + + L+++T+ G + ++RYD ++ET G Y YNA +L+ DA Sbjct: 589 ELSYLHDEAGRLVALTNENGVQAQFRYDLLDRLVEETGFDGRRQRYRYNAADELIAREDA 648 Query: 283 LGAVTEYQYDKNGNQVAVIDP---NHSIWTTKY----DSRSLDAG-----------TINP 324 G T Y YD++G ++ P + +Y D R AG + Sbjct: 649 DGRETTYAYDRDGRLASIRVPATEHAPALVERYRWLADGRLASAGGADCEVRYTYDEVGN 708 Query: 325 LKEETAVTRNARGLMTEF-LDAAGQKTT------------------------------YE 353 L+ E+ V + E DA G + T +E Sbjct: 709 LRLESQVHADGWVYSVEHSHDALGVRQTSRYGDAPPVAWLTYGPGHLHGALVGAVELAFE 768 Query: 354 YDALGRNTR--VRNALGYETIYAYDAQ----GNVEK----IVNANHHETAFTYDPLGRLT 403 DAL R R R + ++ + Q G +++ + + + YD LG+L Sbjct: 769 RDALHREVRRDARRDGQDDALFTQERQHAPLGRLQRSRLRLAGGFDWQRGYRYDGLGQLV 828 Query: 404 EVKNAEGSTTKYSYDASGNLLDKTNALGAVTSYRYDTLNRVIESVNP-LQEITSLAYDEN 462 + + + + +Y YD G LL A A ++YRYD +E V +E A+ EN Sbjct: 829 GIDDNQYPSVRYEYDLGGRLLASRRAGAAASTYRYDAAGNRLEGVGEHAREDARQAFAEN 888 Query: 463 -----GNLQKVTEPDSNTTVYAYNKGNQVEQI--------QYGNDL--------TVKYKY 501 G + T A GN+VE+I GN + ++ Y Sbjct: 889 ELYRSGFSRSETRASQAGEGPARWAGNRVERIAGNRYRFDALGNLVERIGADGERLRLAY 948 Query: 502 DLAGRRSLMTDSTGD-----TRYTYDALNRPTSVI---DPRGNNVRYEW 542 D A R +T D RY YDAL+R + + D VR+ W Sbjct: 949 DGAQRLVHLTRDYADGTRLEARYRYDALSRRIAKVVLRDGVEQQVRFGW 997 Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 118/496 (23%), Positives = 190/496 (38%), Gaps = 100/496 (20%) Query: 268 YDYNALGQLVKVTDALGAVTEYQYDKNGNQVAVIDPNHSIWTTKYDSRSLDAGTINPLKE 327 Y ++ G L+ V D LG V + VA +P ++D + Sbjct: 270 YQFSDSGDLIAVRDRLGQVVRVFAWREHMLVAHGEPGGLEVRYEWDVHA----------- 318 Query: 328 ETAVTRNARGLMTEFLDAAGQKTTYEYDALGRNTRVRNALGYETIYAYDAQGNVEK---I 384 G + + ++A G T+ Y L T V ++LG Y + +G + + Sbjct: 319 -------PHGRVVKQIEAGGLTRTFRY--LRDATEVSDSLGRVERYEFAGEGGQRRWTAL 369 Query: 385 VNANHHETAFTYDPLGRLTEVKNAEGSTTKYSYDASGNLLDKTNALGAVTSYRYDT-LNR 443 V A+ + F YD GRL +++ G T+ D G +L++ + A R D Sbjct: 370 VRADGSRSEFDYDLFGRLVAMRDPLGRETRRRRDGQGRMLEEESPGKARYRKRVDEETGL 429 Query: 444 VIESVNPLQEITSLAYDENGNLQKVTEPDSNTTVYAYNKGNQVEQIQYGNDLTVKYKYDL 503 ++E + +Q + DE GN V P + +T YAY Sbjct: 430 LVELEDAMQRRWTFERDERGNATTVRGP-AGSTRYAYE---------------------- 466 Query: 504 AGRRSLMTDSTGDTRYTYDALNRPTSVIDPRGNNVRYEWTATGQRSRIIYPDNTVVSYDY 563 D R +RPT ++DPRG R EW G + + V YDY Sbjct: 467 ------------DPRLP----DRPTRIVDPRGGERRLEWNRFGLLAALTDCSGQVWRYDY 510 Query: 564 DKLDRIKQVTDAQNGITSYLYDAAGRLKEKLLPNKGQSTYSYDGAGQLLEMKHTAPGGAL 623 D R+ +D +T YD G+L L + +Y YD G+ + A G A Sbjct: 511 DNEGRLVASSDPLGQLTRRRYDPLGQLIGLELADGSALSYEYDALGRQTRIA-DAEGHAT 569 Query: 624 L------EQLTYVYDPAGNKIRSERQEGGSDEDNPAGTPRPADIADYAYDALNQLVQVQK 677 L + L V D G ++ Y +D +LV + Sbjct: 570 LFSWGHGDLLARVSDAGGGEL------------------------SYLHDEAGRLVALTN 605 Query: 678 QNGSRVVYSYDTVGNRLGKETTGAGTTIKELYTYDAANKLTHFEKGSDYKD--YTYDKRG 735 +NG + + YD + +RL +ET G ++ Y Y+AA++L E +D ++ Y YD+ G Sbjct: 606 ENGVQAQFRYDLL-DRLVEETGFDGR--RQRYRYNAADELIARED-ADGRETTYAYDRDG 661 Query: 736 NLLEVSGIDSEAALGL 751 L + +E A L Sbjct: 662 RLASIRVPATEHAPAL 677 >RSp0151 [M] COG3209 Rhs family protein Length = 1710 Score = 128 bits (321), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 188/708 (26%), Positives = 290/708 (40%), Gaps = 109/708 (15%) Query: 25 LVKSTDALGGVVTIARDSAGVPVSVTDAEGHTTAYTNDADGFAKEIKDPSGYTTIIERDT 84 L + D G VT++ D ++TDA G T T + S T I Sbjct: 525 LTQIVDRQGNAVTLSYDGQQRLTAITDATGKRTTLT---------YGNASNNTLI----- 570 Query: 85 LHRTTKITDAEGKLQAVDYDQKDRAVAVTNALDQTSSVTYDANGNPVEHTNEAGSKTVSN 144 T+ITD G+ + YD R +T+A+ SS +YDA G + + + Sbjct: 571 ----TQITDPFGRTARLGYDTSGRLSDITDAIGMKSSFSYDA-GTFI-------NALTTP 618 Query: 145 YQVYRLSSTEDALQN--STTKTYDALGRVIEAKDEAGAVTAYNYDSVGQLEEVTDAEGQS 202 Y + + E+ +Q + T A RV E + +A ++ + G + Sbjct: 619 YGTTKFAYGENGVQRWINITNPQGATERV-EYRHQAPGISYTESQTPGGMSVFNTFINYR 677 Query: 203 NTYTYDDNGNMLTQKD-AKGNITSYTYSKRNELL-----SVTDPLGAKTRYRY------D 250 NT+ ++ + D K IT + ++ + S +PL + Y Y Sbjct: 678 NTFYWNADAYAQAPDDYTKARITHWLHTNNINMTAGVIESTKEPLENRVWYTYANQPFPA 737 Query: 251 AAGNTIKET-------DALGNSTYYDYNALGQLVKVTDALGAVTEYQYDKNGNQVAVIDP 303 G+T + D Y YNA G + TDA G T Y+Y NG + Sbjct: 738 GIGSTEQPLAVARVLDDGSTQLIRYSYNAQGSVTSKTDAAGRQTLYEYAGNGIDALRV-- 795 Query: 304 NHSIWTTKYDSRSLDAGTINPLKEETAVTRNARGLMTEFLDAAGQKTTYEYDALGRNTRV 363 + ++ G+ + L E T N + + DAAGQ TTY Y+ G+ T Sbjct: 796 -----------KQVNGGSTDLLAE---YTYNDQHEPLTYRDAAGQLTTYTYNTAGQKTSE 841 Query: 364 RNALGYETIYAYDAQGNVEKIVNANHHETA-FTYDPLGRLTEVKNAEGSTTKYSYDASGN 422 NALG + YDA G ++++VNAN A +TYD +GR+ ++EG T KY YDA Sbjct: 842 INALGQTVRWEYDANGFLQRVVNANGKSAASYTYDTIGRVASQTDSEGRTVKYQYDALNR 901 Query: 423 LLDKTNALGAVTSYRYDTLNRVIESVNPLQEITSLAYDENGNLQKVTEPDSNTTVYAYNK 482 L G +D L+ ++ + + L +T YD +L +VT+P Y Y Sbjct: 902 LTLTQYPDGTTRRQTWDKLD-LVSTTDRLGRVTRYTYDSARHLMQVTDPLGRRIQYGYYP 960 Query: 483 GNQVEQIQYGNDLTVKYKYDLAGRRSLMT--DSTGDTRYTYDALNRPTSVIDPRGNNVRY 540 +++ + ++ D+ GR T D GDT +R + D +G + + Sbjct: 961 NGKLKTLTDAAGNVTTWQRDVQGRVIGKTYADGKGDTLAYEATTSRLKRITDAQGQSKTF 1020 Query: 541 EWTATGQRSRIIYPDNT----VVSYDYDKL-DRIKQVTDAQNGITSYLYDAAG-----RL 590 +T + + + Y T VSY YD RI VTD G +Y Y+ AG R+ Sbjct: 1021 SYTMDDRVAELDYSGATNPTASVSYRYDSAYPRISSVTDG-TGSHNYSYNEAGSPGANRV 1079 Query: 591 KEKLLPNKGQS---TYSYDGAGQLLEMKHTAPGGALLEQLTYVYDPAGNKIRSERQEGGS 647 E+ +P GQS Y YD G+ E + G+L E T+ YD G RQ G Sbjct: 1080 SEETVP--GQSDTLRYQYDALGRPTERRI----GSLSE--TWSYDALG------RQVG-- 1123 Query: 648 DEDNPAGTPRPADIADYAYDALNQLVQVQKQN--GSRVVYSYDTVGNR 693 GTP + ++Y L + Q Q GSR+ +Y NR Sbjct: 1124 -----HGTP----LGQFSYAYLGETGQTSSQQLEGSRLRTAYRYEDNR 1162 Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 155/609 (25%), Positives = 240/609 (39%), Gaps = 79/609 (12%) Query: 192 LEEVTDAEGQSNTYTYDDNGNMLTQKDAKGNITSYTY--SKRNELLS-VTDPLGAKTRYR 248 L ++ D +G + T +YD + DA G T+ TY + N L++ +TDP G R Sbjct: 525 LTQIVDRQGNAVTLSYDGQQRLTAITDATGKRTTLTYGNASNNTLITQITDPFGRTARLG 584 Query: 249 YDAAGNTIKETDALGNSTYYDYNALGQLVKVTDALGAVTEYQYDKNGNQVAVIDPNHSIW 308 YD +G TDA+G + + Y+A G + T++ Y +NG Q + N Sbjct: 585 YDTSGRLSDITDAIGMKSSFSYDA-GTFINALTTPYGTTKFAYGENGVQRWINITNPQGA 643 Query: 309 TTKYDSRSLDAGTINPLKEETAVTRNARGLMTEFLDAAGQKTTYEYDALGRN------TR 362 T + + R G I+ + +T G M+ F + T+ ++A T+ Sbjct: 644 TERVEYRHQAPG-ISYTESQTP------GGMSVFNTFINYRNTFYWNADAYAQAPDDYTK 696 Query: 363 VRNALGYETIYAYDAQGNVEKIVNANHHETAFTY-------------DPLGRLTEVKNAE 409 R T G +E + +TY PL + + Sbjct: 697 ARITHWLHTNNINMTAGVIESTKEPLENRVWYTYANQPFPAGIGSTEQPLAVARVLDDGS 756 Query: 410 GSTTKYSYDASGNLLDKTNALGAVTSYRY-----DTLNRVIESVNPLQEITSLAYDENGN 464 +YSY+A G++ KT+A G T Y Y D L ++ VN Y N Sbjct: 757 TQLIRYSYNAQGSVTSKTDAAGRQTLYEYAGNGIDALR--VKQVNGGSTDLLAEYTYNDQ 814 Query: 465 LQKVTEPDS--NTTVYAYNKGNQVEQIQYGNDLTVKYKYDLAGRRSLMTDSTGDT--RYT 520 + +T D+ T Y YN Q TV+++YD G + ++ G + YT Sbjct: 815 HEPLTYRDAAGQLTTYTYNTAGQKTSEINALGQTVRWEYDANGFLQRVVNANGKSAASYT 874 Query: 521 YDALNRPTSVIDPRGNNVRYEWTATGQRSRIIYPDNTVVSYDYDKLDRIKQVTDAQNGIT 580 YD + R S D G V+Y++ A + + YPD T +DKLD + TD +T Sbjct: 875 YDTIGRVASQTDSEGRTVKYQYDALNRLTLTQYPDGTTRRQTWDKLDLVS-TTDRLGRVT 933 Query: 581 SYLYDAAGRLKEKLLPNKGQSTYSY----------DGAGQLLEMKHTAPGG--------- 621 Y YD+A L + P + Y Y D AG + + G Sbjct: 934 RYTYDSARHLMQVTDPLGRRIQYGYYPNGKLKTLTDAAGNVTTWQRDVQGRVIGKTYADG 993 Query: 622 --------ALLEQLTYVYDPAG-NKIRSERQEGGSDEDNPAGTPRPADIADYAYD-ALNQ 671 A +L + D G +K S + E + +G P Y YD A + Sbjct: 994 KGDTLAYEATTSRLKRITDAQGQSKTFSYTMDDRVAELDYSGATNPTASVSYRYDSAYPR 1053 Query: 672 LVQVQKQNGSRVVYSYDTVG----NRLGKETT-GAGTTIKELYTYDAANKLTHFEKGSDY 726 + V GS YSY+ G NR+ +ET G T++ Y YDA + T GS Sbjct: 1054 ISSVTDGTGSH-NYSYNEAGSPGANRVSEETVPGQSDTLR--YQYDALGRPTERRIGSLS 1110 Query: 727 KDYTYDKRG 735 + ++YD G Sbjct: 1111 ETWSYDALG 1119 Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 168/639 (26%), Positives = 268/639 (41%), Gaps = 91/639 (14%) Query: 117 DQTSSVTYDANGNPVEHTNEAGSKTVSNYQVYRLSSTE-DALQNSTTKTYDA---LGRVI 172 D + TY+ P+ + + AG T Y ++E +AL + YDA L RV+ Sbjct: 804 DLLAEYTYNDQHEPLTYRDAAGQLTTYTYNTAGQKTSEINALGQTVRWEYDANGFLQRVV 863 Query: 173 EAKDEAGAVTAYNYDSVGQLEEVTDAEGQSNTYTYDDNGNMLTQKDAKGNITSYTYSKRN 232 A ++ A +Y YD++G++ TD+EG++ Y YD + + G T+ K Sbjct: 864 NANGKSAA--SYTYDTIGRVASQTDSEGRTVKYQYDALNRLTLTQYPDGTTRRQTWDKL- 920 Query: 233 ELLSVTDPLGAKTRYRYDAAGNTIKETDALGNSTYYDYNALGQLVKVTDALGAVTEYQYD 292 +L+S TD LG TRY YD+A + ++ TD LG Y Y G+L +TDA G VT +Q D Sbjct: 921 DLVSTTDRLGRVTRYTYDSARHLMQVTDPLGRRIQYGYYPNGKLKTLTDAAGNVTTWQRD 980 Query: 293 KNGNQVAVIDPNHSIWTTKYDSRSLDAGTINPLKEETAVTRNARGLMTEF---------- 342 G VI ++ K D+ + +A T + LK T +A+G F Sbjct: 981 VQGR---VIGKTYA--DGKGDTLAYEA-TTSRLKRIT----DAQGQSKTFSYTMDDRVAE 1030 Query: 343 LDAAG-----QKTTYEYD-ALGRNTRVRNALGYETIYAYDAQGN------VEKIVNANHH 390 LD +G +Y YD A R + V + G Y+Y+ G+ E+ V Sbjct: 1031 LDYSGATNPTASVSYRYDSAYPRISSVTDGTGSHN-YSYNEAGSPGANRVSEETVPGQSD 1089 Query: 391 ETAFTYDPLGRLTEVKNAEGSTTKYSYDASGNLLDKTNALGAVT-SYRYDTLNRVIESVN 449 + YD LGR TE + S T +SYDA G + LG + +Y +T + + Sbjct: 1090 TLRYQYDALGRPTERRIGSLSET-WSYDALGRQVGHGTPLGQFSYAYLGETGQTSSQQLE 1148 Query: 450 PLQEITSLAYDENGNLQKVTEPDSNTTVYAYNKGNQVEQIQYGNDLTVKYKYDLAGRRSL 509 + T+ Y++N N +++ D+ + KG + + + + G R Sbjct: 1149 GSRLRTAYRYEDNRNDRRLKAIDNAGAM----KGGWAGGVGDRDQDALAGSLHMQGGRVP 1204 Query: 510 MTD--------STGDTRYTYDALNRPTSVIDPRGNNVRYEWTATGQRSRIIYPDNTVVSY 561 + D + GD + D + D G++ R W G + + ++ Y Sbjct: 1205 VGDGWHDGGRWNEGDRWHEGDRWHEGGRHGD-YGHHDRAPWPPFGHGGAMSHRASSFF-Y 1262 Query: 562 DYDKLDRIKQVTDA-QNGITS--YLYDAAGRLKEKLLPNKGQSTYSYDGA-----GQLLE 613 + D +RI + +A + G Y YDAA RL YSYD A + Sbjct: 1263 ETDAENRIVSLLEAGREGPKPHWYRYDAADRLLADDNRGWNDRRYSYDAADNRTSATSRQ 1322 Query: 614 MKHTAPGGALLEQLTY-----VYDPAGNKIRSERQEGGSDEDNPAGTPRPADIADYAYDA 668 K T AL + T YD AGN + E ++ Y +DA Sbjct: 1323 AKQTIVANALNQMQTVNGQPAQYDAAGNLLEDEARQ-------------------YDWDA 1363 Query: 669 LNQLVQV--QKQNGSRVVYSYDTVGNR-LGKETTGAGTT 704 ++L+++ + Q + YD +G R + E G GTT Sbjct: 1364 EHRLIRIRYKAQASKETRFGYDGLGRRTVITEVDGTGTT 1402 Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 100/318 (31%), Positives = 145/318 (45%), Gaps = 21/318 (6%) Query: 2 NRPVEEIDALGNRATYEYDTAGNLVKSTDALGGVVTIARDSAGVPVSVTDAEGHTTA-YT 60 + P+ DA G TY Y+TAG +ALG V D+ G V +A G + A YT Sbjct: 815 HEPLTYRDAAGQLTTYTYNTAGQKTSEINALGQTVRWEYDANGFLQRVVNANGKSAASYT 874 Query: 61 NDADGFAKEIKDPSGYTTIIERDTLHRTTKITDAEGKLQAVDYDQKDRAVAVTNALDQTS 120 D G D G T + D L+R T +G + +D+ D V+ T+ L + + Sbjct: 875 YDTIGRVASQTDSEGRTVKYQYDALNRLTLTQYPDGTTRRQTWDKLD-LVSTTDRLGRVT 933 Query: 121 SVTYDANGNPVEHTNEAGSKTVSNYQVY-RLSSTEDALQNSTTKTYDALGRVIEA--KDE 177 TYD+ + ++ T+ G + Y +L + DA N TT D GRVI D Sbjct: 934 RYTYDSARHLMQVTDPLGRRIQYGYYPNGKLKTLTDAAGNVTTWQRDVQGRVIGKTYADG 993 Query: 178 AGAVTAYNYDSVGQLEEVTDAEGQSNTYTY--DDNGNMLTQKDAKGNITSYTY---SKRN 232 G AY + +L+ +TDA+GQS T++Y DD L A S +Y S Sbjct: 994 KGDTLAYE-ATTSRLKRITDAQGQSKTFSYTMDDRVAELDYSGATNPTASVSYRYDSAYP 1052 Query: 233 ELLSVTDPLGAKTRYRYDAAG----NTIKETDALGNS--TYYDYNALGQLVKVTDALGAV 286 + SVTD G+ Y Y+ AG N + E G S Y Y+ALG+ + +G++ Sbjct: 1053 RISSVTDGTGSHN-YSYNEAGSPGANRVSEETVPGQSDTLRYQYDALGRPTE--RRIGSL 1109 Query: 287 TE-YQYDKNGNQVAVIDP 303 +E + YD G QV P Sbjct: 1110 SETWSYDALGRQVGHGTP 1127 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 131/548 (23%), Positives = 195/548 (35%), Gaps = 112/548 (20%) Query: 24 NLVKSTDALGGVVTIARDSAGVPVSVTDAEGHTTAYTNDADGFAKEIKDPSGYTTIIERD 83 +LV +TD LG V DSA + VTD G Y +G K + D +G T +RD Sbjct: 921 DLVSTTDRLGRVTRYTYDSARHLMQVTDPLGRRIQYGYYPNGKLKTLTDAAGNVTTWQRD 980 Query: 84 ----------------------TLHRTTKITDAEGKLQAVDYDQKDRAVAV--TNALDQT 119 T R +ITDA+G+ + Y DR + + A + T Sbjct: 981 VQGRVIGKTYADGKGDTLAYEATTSRLKRITDAQGQSKTFSYTMDDRVAELDYSGATNPT 1040 Query: 120 SSVTY-------------DANGNPVEHTNEAGSKTVSNYQVYRLSSTEDALQNSTTKTYD 166 +SV+Y D G+ NEAGS + + D L+ YD Sbjct: 1041 ASVSYRYDSAYPRISSVTDGTGSHNYSYNEAGSPGANRVSEETVPGQSDTLRYQ----YD 1096 Query: 167 ALGRVIEAKDEAGAVTAYNYDSVGQLEEVTDAEGQSNTYTYDDNGNMLTQKDAKGNITSY 226 ALGR E + +G L E T++YD G + G SY Sbjct: 1097 ALGRPTERR-------------IGSLSE---------TWSYDALGRQVGHGTPLGQF-SY 1133 Query: 227 TYSKRNELLSVTDPLGAKTR--YRYDAAGN--TIKETDALGNSTYYDYNALGQLVKVTDA 282 Y S G++ R YRY+ N +K D G +G + DA Sbjct: 1134 AYLGETGQTSSQQLEGSRLRTAYRYEDNRNDRRLKAIDNAGAMKGGWAGGVGD--RDQDA 1191 Query: 283 LGAVTEYQYDKNGNQVAVIDPNHSIWTTKYDSRSLDAGTINPLKEETAVTRNARGLMTEF 342 L Q G +V V D H D G N R G Sbjct: 1192 LAGSLHMQ----GGRVPVGDGWH------------DGGRWNEGDRWHEGDRWHEGGRHGD 1235 Query: 343 LDAAGQKTTYEYDALGRNTRVRNALGYETIYAYDAQGNVEKIVNANHH---ETAFTYDPL 399 + + G + ++ YET DA+ + ++ A + YD Sbjct: 1236 YGHHDRAPWPPFGHGGAMSHRASSFFYET----DAENRIVSLLEAGREGPKPHWYRYDAA 1291 Query: 400 GRLTEVKNAEGSTTKYSYDASGNLLDKTNALGAVTSYRYDTLNRVIESVNPLQEITS--L 457 RL N + +YSYDA+ N T+ R V ++N +Q + Sbjct: 1292 DRLLADDNRGWNDRRYSYDAADNRTSATS--------RQAKQTIVANALNQMQTVNGQPA 1343 Query: 458 AYDENGNLQKVTEPDSNTTVYAYNKGNQVEQIQYGNDLT--VKYKYDLAGRRSLMT--DS 513 YD GNL + Y ++ +++ +I+Y + ++ YD GRR+++T D Sbjct: 1344 QYDAAGNLL-----EDEARQYDWDAEHRLIRIRYKAQASKETRFGYDGLGRRTVITEVDG 1398 Query: 514 TGDTRYTY 521 TG T Y Sbjct: 1399 TGTTETHY 1406 >STM0291 [M] COG3209 Rhs family protein Length = 1364 Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 181/704 (25%), Positives = 275/704 (39%), Gaps = 96/704 (13%) Query: 12 GNRATYEYDTAGNLVKSTDALGGVVTIARDSAGVPVSVTDAE-GHTTAYTNDADGFAKEI 70 GN Y YD G L GVV + AG V E G TA++N A GF Sbjct: 403 GNLVEYRYDDNGQLT-------GVV----NRAGTQVRQFAYENGLMTAHSN-ATGFTCRY 450 Query: 71 KDPSGYTTIIERDTLHRTTKITDAEGKLQAVDYDQKDRAVAVTNALDQTSSVTYDANGNP 130 + E D R T+ ++G+ DYD VT +T YD Sbjct: 451 R-------WQELDGAPRVTEHDTSDGEHYRFDYDFAAGTTTVTGRQGETWQWWYDRETYI 503 Query: 131 VEHTNEAGSKTVSNYQVYRLSSTEDALQ--------NSTTKTYDALGRVIEAKDEAGAVT 182 H G +YR + ED + YD RV++ D G VT Sbjct: 504 TAHRTPGGG-------MYRFTYNEDHFPVNIELPGGRTVAYEYDIQNRVVKTTDPEGRVT 556 Query: 183 AYNYDSVGQLEEVTDAEGQSNTYTYDDNGNMLTQKDAKGNITSYTYSKRNELLSVTDPLG 242 ++ G+ +E+T DD+ TQ +A G + + TDP G Sbjct: 557 QTQWN--GEFDEITRT-------ALDDDAVWKTQYNAHG-----------QPVQETDPEG 596 Query: 243 AKTRYRYDAAGNTIKETDALGNSTYYDYNALGQLVKVTDALGAVTEYQYDKNGNQVAVID 302 T+Y YD G TDA G + +++ GQ+ + TD G T Y +D++GN V D Sbjct: 597 RVTQYAYDEQGQMCSRTDAAGGTVVTAFDSRGQMTRYTDCSGRSTGYDHDEDGNLTRVTD 656 Query: 303 PNHSIWTTKYDSRSLDAGTINPLKEETAVTRNARGLMTEFLDAAGQKTTYEYDALGRNTR 362 + Y+ L +P K++ T NA GLM+ G ++ Y G Sbjct: 657 AEGKVVRISYNRLGLPETVNSPGKQQDRYTWNALGLMSSHRRITGSVESWRYTPRGLLAA 716 Query: 363 VRNALGYETIYAYDAQGNVEKIVNANHHETAFTYDPLGRLTEVKNAEGSTTKYSYDASGN 422 + ET + Y +G V + N N + F++D GRL +G + + D SG Sbjct: 717 HTDEEKRETRWQYTPEGRVAALTNGNGAQYRFSHDADGRLVREVRPDGLSRTFILDDSGY 776 Query: 423 L--LDKTNALGAVT--SYRYDTLNRVIESVNPLQEITSLAYDENGNLQKVTEPDSNTTVY 478 L + T G V + + D L R++ + N + T +Y+ L ++T T+ Sbjct: 777 LTAIQTTGTQGGVRRETQQRDALGRLLRTENEHGQRT-FSYNR---LDQITA----VTLT 828 Query: 479 AYNKGNQVEQIQYGNDLTVKYKYDLAGRRSLMTDSTGDTRYTYDALNRPTSVIDPRGNNV 538 G Q ++Q TV+++YD +G + G Y DAL PT + P G ++ Sbjct: 829 PTEAGQQQHRMQAD---TVRFEYDRSGWLTAEHAGNGSICYQRDALGNPTDITLPDGQHL 885 Query: 539 RYEWTATGQRSRIIYPDNTVVSYDYDKLDRIKQVTDAQNGITSYL-YDAAGRLKEKLLPN 597 + + +G + TV Y+ D L R Q+ Q + +Y YD G L + Sbjct: 886 THLYYGSGHLLQTALDGLTVSEYERDSLHR--QIMRTQGQLATYSGYDDDGLLSWQ---- 939 Query: 598 KGQSTYSYDGAGQLLEMKHTAPGGALLEQLTYVYDPAGNKIRSERQEGGSDEDNPAGTPR 657 +S S G+ +L + A G + + Y ++ G E G+ +D G+ Sbjct: 940 --RSLAS--GSAPVLPGQRPARQGCVTSR-DYYWNNHG--------EVGTIDDGLRGS-- 984 Query: 658 PADIADYAYDALNQLVQVQKQNGSRVVYSYDTVGNRLGKETTGA 701 Y+YD L Q Y YD GN L E GA Sbjct: 985 ----VVYSYDRSGYLTGRSGQMYDHDRYYYDKAGNLLDNEGQGA 1024 Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 178/804 (22%), Positives = 282/804 (35%), Gaps = 187/804 (23%) Query: 69 EIKDPSGYTTIIERDTLHRTTKITDAE-------GKLQAVDYDQKDRAVAVTN-ALDQTS 120 I SG+ ++ R +++ E G L YD + V N A Q Sbjct: 369 RIASSSGHHLLLHRTQTPAGERLSRIELVQGGTRGNLVEYRYDDNGQLTGVVNRAGTQVR 428 Query: 121 SVTYDANGNPVEHTNEAGSKTVSNYQVYRLSSTEDALQNSTTKTYDALGRVIEAKDEAGA 180 Y+ NG H+N G +Q D RV E G Sbjct: 429 QFAYE-NGLMTAHSNATGFTCRYRWQ-----------------ELDGAPRVTEHDTSDGE 470 Query: 181 VTAYNYDSVGQLEEVTDAEGQSNTYTYDDNGNMLTQKDAKGNITSYTYSKRNELLSVTDP 240 ++YD VT +G++ + YD + + G + +TY++ + +++ P Sbjct: 471 HYRFDYDFAAGTTTVTGRQGETWQWWYDRETYITAHRTPGGGMYRFTYNEDHFPVNIELP 530 Query: 241 LGAKTRYRYDAAGNTIKETDALGNSTY------YD----------------YNALGQLVK 278 G Y YD +K TD G T +D YNA GQ V+ Sbjct: 531 GGRTVAYEYDIQNRVVKTTDPEGRVTQTQWNGEFDEITRTALDDDAVWKTQYNAHGQPVQ 590 Query: 279 VTDALGAVTEYQYDKNGNQVAVIDPNHSIWTTKYDSRSLDAGTINPLKEETAVTRNARGL 338 TD G VT+Y YD+ G + D T +DS RG Sbjct: 591 ETDPEGRVTQYAYDEQGQMCSRTDAAGGTVVTAFDS---------------------RGQ 629 Query: 339 MTEFLDAAGQKTTYEYDALGRNTRVRNALGYETIYAYDAQGNVEKIVNANHHETAFTYDP 398 MT + D +G+ T Y++D G TRV +A G +Y+ G E + + + +T++ Sbjct: 630 MTRYTDCSGRSTGYDHDEDGNLTRVTDAEGKVVRISYNRLGLPETVNSPGKQQDRYTWNA 689 Query: 399 LGRLTEVKNAEGST---------------------TKYSYDASGNLLDKTNALGAVTSYR 437 LG ++ + GS T++ Y G + TN GA + Sbjct: 690 LGLMSSHRRITGSVESWRYTPRGLLAAHTDEEKRETRWQYTPEGRVAALTNGNGAQYRFS 749 Query: 438 YDTLNRVIESVNPLQEITSLAYDENGNLQKV------------------------TEPDS 473 +D R++ V P + D++G L + TE + Sbjct: 750 HDADGRLVREVRPDGLSRTFILDDSGYLTAIQTTGTQGGVRRETQQRDALGRLLRTENEH 809 Query: 474 NTTVYAYNKGNQV-----------EQIQYGNDLTVKYKYDLAGRRSLMTDSTGDTRYTYD 522 ++YN+ +Q+ +Q TV+++YD +G + G Y D Sbjct: 810 GQRTFSYNRLDQITAVTLTPTEAGQQQHRMQADTVRFEYDRSGWLTAEHAGNGSICYQRD 869 Query: 523 ALNRPTSVIDPRGNNVRYEWTATGQRSRIIYPDNTVVSYDYDKLDRIKQVTDAQNGITSY 582 AL PT + P G ++ + + +G + TV Y+ D L R Q+ Q + +Y Sbjct: 870 ALGNPTDITLPDGQHLTHLYYGSGHLLQTALDGLTVSEYERDSLHR--QIMRTQGQLATY 927 Query: 583 L-YDAAGRLKEK---------LLPN-----------------------------KGQSTY 603 YD G L + +LP +G Y Sbjct: 928 SGYDDDGLLSWQRSLASGSAPVLPGQRPARQGCVTSRDYYWNNHGEVGTIDDGLRGSVVY 987 Query: 604 SYDGAGQLLEMKHTAPGGALLEQLTYVYDPAGNKIRSERQEG-------GSDED----NP 652 SYD +G L T G + + Y YD AGN + +E Q G D N Sbjct: 988 SYDRSGYL-----TGRSGQMYDHDRYYYDKAGNLLDNEGQGAVMSNRLPGCGRDRYGYNE 1042 Query: 653 AGTPRPADIADYAYDALNQLVQVQKQNGSRVVYSYDTVGNRLGKETTG--AGTTIKEL-- 708 G ++A QL +V N + Y YD +G R K T G G T + Sbjct: 1043 WGELTTRRDQQLEWNAQGQLTRVISGN-TETHYGYDALGRRTRKATYGRHTGHTARSRTD 1101 Query: 709 YTYDAANKLTHFEKGSDYKDYTYD 732 + ++ L + ++ Y YD Sbjct: 1102 FVWEGFRLLQENVQQQGWRTYLYD 1125 Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 153/640 (23%), Positives = 235/640 (36%), Gaps = 122/640 (19%) Query: 59 YTNDADGFAKEIKDPSGYTTIIERDTLHRTTKITDAEGKLQAVDYDQKDRAVAVTNALDQ 118 +T + D F I+ P G T E D +R K TD EG++ ++ + + T ALD Sbjct: 516 FTYNEDHFPVNIELPGGRTVAYEYDIQNRVVKTTDPEGRVTQTQWNGEFDEITRT-ALDD 574 Query: 119 TS--SVTYDANGNPVEHTNEAGSKTVSNYQVYRLSSTEDALQNSTTKTYDALGRVIEAKD 176 + Y+A+G PV+ T+ G V+ Y YD G++ D Sbjct: 575 DAVWKTQYNAHGQPVQETDPEGR--VTQY------------------AYDEQGQMCSRTD 614 Query: 177 EAGAVTAYNYDSVGQLEEVTDAEGQSNTYTYDDNGNMLTQKDAKGNITSYTYSKRNELLS 236 AG +DS GQ+ TD G+S Y +D++GN+ DA+G + +Y++ + Sbjct: 615 AAGGTVVTAFDSRGQMTRYTDCSGRSTGYDHDEDGNLTRVTDAEGKVVRISYNRLGLPET 674 Query: 237 VTDPLGAKTRYRYDAAGNTIKETDALGNSTYYDYNALGQLVKVTDALGAVTEYQYDKNGN 296 V P + RY ++A G G+ + Y G L TD T +QY G Sbjct: 675 VNSPGKQQDRYTWNALGLMSSHRRITGSVESWRYTPRGLLAAHTDEEKRETRWQYTPEGR 734 Query: 297 QVAVIDPNHSIWTTKYDSRSLDAGTINPLKEETAVTRNARGLMTEFLDAAGQ----KTTY 352 A+ + N + + +D+ + P + G +T Q + T Sbjct: 735 VAALTNGNGAQYRFSHDADGRLVREVRPDGLSRTFILDDSGYLTAIQTTGTQGGVRRETQ 794 Query: 353 EYDALGRNTRVRNALGYETI-------------------------------YAYDAQGNV 381 + DALGR R N G T + YD G + Sbjct: 795 QRDALGRLLRTENEHGQRTFSYNRLDQITAVTLTPTEAGQQQHRMQADTVRFEYDRSGWL 854 Query: 382 EKIVNANHHETAFTYDPLGRLTEVKNAEGSTTKYSYDASGNLLDKTNALGAVTSYRYDTL 441 +A + + D LG T++ +G + Y SG+LL V+ Y D+L Sbjct: 855 -TAEHAGNGSICYQRDALGNPTDITLPDGQHLTHLYYGSGHLLQTALDGLTVSEYERDSL 913 Query: 442 NRVIESVNPLQEITSLAYDENGNL----------------QKVTEPDSNTTV-YAYNKGN 484 +R I Q T YD++G L Q+ T+ Y +N Sbjct: 914 HRQIMRTQG-QLATYSGYDDDGLLSWQRSLASGSAPVLPGQRPARQGCVTSRDYYWNNHG 972 Query: 485 QVEQIQYGNDLTVKYKYD----LAGRRSLMTD---------------------------S 513 +V I G +V Y YD L GR M D Sbjct: 973 EVGTIDDGLRGSVVYSYDRSGYLTGRSGQMYDHDRYYYDKAGNLLDNEGQGAVMSNRLPG 1032 Query: 514 TGDTRYTYDALNRPTSVIDPRGNNVRYEWTATGQRSRIIYPDNTVVSYDYDKLDRI---- 569 G RY Y+ T+ D + EW A GQ +R+I NT Y YD L R Sbjct: 1033 CGRDRYGYNEWGELTTRRDQ-----QLEWNAQGQLTRVI-SGNTETHYGYDALGRRTRKA 1086 Query: 570 ---KQVTDAQNGITSYLYDAAGRLKEKLLPNKGQSTYSYD 606 + T ++++ RL ++ + +G TY YD Sbjct: 1087 TYGRHTGHTARSRTDFVWEGF-RLLQENVQQQGWRTYLYD 1125 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.310 0.129 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 95,414,912 Number of extensions: 4100562 Number of successful extensions: 10886 Number of sequences better than 1.0e-05: 30 Number of HSP's gapped: 8622 Number of HSP's successfully gapped: 148 Length of query: 1310 Length of database: 38,378,431 Length adjustment: 118 Effective length of query: 1192 Effective length of database: 24,769,019 Effective search space: 29524670648 Effective search space used: 29524670648 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 122 (51.6 bits)