BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0422.0015.p
         (147 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAC2638 [O] COG1067 Predicted ATP-dependent protease                  112   2e-25
Ta1081 [O] COG1067 Predicted ATP-dependent protease                    92   3e-19
TVN0494 [O] COG1067 Predicted ATP-dependent protease                   92   3e-19
SPBC28F2.05c [R] COG0656 Aldo/keto reductases, related to diketo...    88   5e-18
YNL102w [L] COG0417 DNA polymerase elongation subunit (family B)       88   5e-18

>CAC2638 [O] COG1067 Predicted ATP-dependent protease
          Length = 566

 Score =  112 bits (280), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/111 (45%), Positives = 79/111 (71%)

Query: 2   NLEPDRYDLHVNFPGGTPIDGPSAGVAMAVAIVSAIRHLPVDNTVAITGEIGIHGRVKPV 61
           N+    YD+H++F GG  +DGPSAGV++A AI SA++ LP+ + VA+TGEI ++G VKPV
Sbjct: 423 NINIKNYDIHIDFQGGYAVDGPSAGVSIACAIFSALKKLPIKSKVAMTGEITLNGIVKPV 482

Query: 62  GGVIAKVEAAFQAGATTVLIPKENWQSLFADLAPLQVIPMETVEEVFRHLF 112
           GGV +KV AA +AGA  V+IP +NW   F   + ++VI ++ ++E+  ++ 
Sbjct: 483 GGVSSKVTAAAKAGAELVIIPYDNWNKSFDSYSNIKVIGVKNIKEILSYVL 533


>Ta1081 [O] COG1067 Predicted ATP-dependent protease
          Length = 657

 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 72/105 (68%), Gaps = 4/105 (3%)

Query: 9   DLHVNFPGGTP-IDGPSAGVAMAVAIVSAIRHLPVDNTVAITGEIGIHGRVKPVGGVIAK 67
           D+H+ F G    ++G SA V++A A++SAI ++PVD +VA+TG + + G V PVGGV AK
Sbjct: 509 DIHIQFVGTYEGVEGDSASVSIATAVISAIENIPVDQSVAMTGSLSVRGDVLPVGGVTAK 568

Query: 68  VEAAFQAGATTVLIPKENWQSLFAD---LAPLQVIPMETVEEVFR 109
           VEAA +AG   V++P+ N+  +  D   +  +++IP +T+E+V R
Sbjct: 569 VEAAIEAGLNKVIVPELNYSDIILDADHVNKIEIIPAKTIEDVLR 613


>TVN0494 [O] COG1067 Predicted ATP-dependent protease
          Length = 655

 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 71/105 (67%), Gaps = 4/105 (3%)

Query: 9   DLHVNFPGGTP-IDGPSAGVAMAVAIVSAIRHLPVDNTVAITGEIGIHGRVKPVGGVIAK 67
           D+H+ F G    ++G SA V++A A++SAI ++PVD +VA+TG + + G V PVGGV AK
Sbjct: 509 DIHIQFVGTYEGVEGDSASVSIATAVISAIENIPVDQSVAMTGSLSVRGDVLPVGGVTAK 568

Query: 68  VEAAFQAGATTVLIPKENWQSLFAD---LAPLQVIPMETVEEVFR 109
           VEAA +AG   V++P+ N+  +  D   +  +Q+IP  T+E+V +
Sbjct: 569 VEAAIEAGMAKVIVPELNYNDIILDAEHINRIQIIPARTIEDVLK 613


>SPBC28F2.05c [R] COG0656 Aldo/keto reductases, related to diketogulonate
           reductase
          Length = 346

 Score = 87.8 bits (216), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 0/116 (0%), Positives = 0/116 (0%), Gaps = 8/116 (6%)

Query: 1   MNLEPDRY---DLHVNFP-GGTPIDGPSAGVAMAVAIVSAIRHLPVDNTVAITGEIGIHG 56
                                                                       
Sbjct: 652                                                              711

Query: 57  RVKPVGGVIAKVEAAFQAGATTVLIPKENWQSL--FAD--LAPLQVIPMETVEEVF 108
                                                                   
Sbjct: 712                                                          767


>YNL102w [L] COG0417 DNA polymerase elongation subunit (family B)
          Length = 1468

 Score = 87.8 bits (216), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 3/116 (2%), Positives = 16/116 (13%), Gaps = 8/116 (6%)

Query: 1   MNLEPDRY---DLHVNFP-GGTPIDGPSAGVAMAVAIVSAIRHLPVDNTVAITGEIGIHG 56
           M+                         ++ +            L  D    +   +    
Sbjct: 652 MHDLNIPTFSSIGRRLRRTWPEKFGRGNSNMNHFFISDICSGRLICDIANEMGQSLTPKC 711

Query: 57  RVKPVGGVIAKVEAAFQAGATTVLIPKENWQSL--FAD--LAPLQVIPMETVEEVF 108
           +   +  +                   +    +          +    +       
Sbjct: 712 QSWDLSEMYQVTCEKEHKPLDIDYQNPQYQNDVNSMTMALQENITNCMISAEVSYR 767


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.317    0.134    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 11,356,359
Number of extensions: 434501
Number of successful extensions: 1674
Number of sequences better than 1.0e-05: 673
Number of HSP's gapped: 1671
Number of HSP's successfully gapped: 673
Length of query: 147
Length of database: 38,378,431
Length adjustment: 96
Effective length of query: 51
Effective length of database: 27,306,367
Effective search space: 1392624717
Effective search space used: 1392624717
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 111 (47.4 bits)