BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0422.0006.p (215 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BH3668 [D] COG0489 ATPases involved in chromosome partitioning 226 2e-59 BS_ywqD [D] COG0489 ATPases involved in chromosome partitioning 217 1e-56 CAC3040 [D] COG0489 ATPases involved in chromosome partitioning 214 7e-56 BS_yveL [D] COG0489 ATPases involved in chromosome partitioning 204 6e-53 CAC3043 [D] COG0489 ATPases involved in chromosome partitioning 202 3e-52 >BH3668 [D] COG0489 ATPases involved in chromosome partitioning Length = 235 Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 104/194 (53%), Positives = 147/194 (75%) Query: 6 SPVSEAFRALRTNIDFSSVDEQIQIIMVTSSGPEEGKSTVTANLAAAYAQADKKVLLIDG 65 SP+SE +R +RTNI+F++VD +++ I+VTSSGP EGKST +ANLA AQ VL +D Sbjct: 25 SPISEQYRTIRTNIEFAAVDRELKTIVVTSSGPGEGKSTTSANLAVVMAQNGHNVLFVDA 84 Query: 66 DLRKPTAHKTFSLSNRAGLSSLLSQQADLEDVVQDSGVANLSIMTSGPIPPNPAEMMASN 125 DLRKPTAH TF N GL+ +L +Q LE+ +Q++ V NLS++TSGPIPPNPAE++ S Sbjct: 85 DLRKPTAHYTFRAVNTRGLTRVLMRQETLEEAIQETKVENLSLLTSGPIPPNPAELLNSK 144 Query: 126 RMSAVLQELRQRYDMILFDTPPLLAVTDAQIIASKSDGVIMVVSYGKVKRDIAAKAKANL 185 M +++E+R ++D+++ D+PPL AVTDAQI++SK DG ++V+S GK +++ A KAK L Sbjct: 145 MMELIIKEVRDQFDIVIIDSPPLNAVTDAQILSSKCDGTVLVISSGKTQKEEALKAKDLL 204 Query: 186 DRVGAKMLGVVLNN 199 D+ A +LGVVLNN Sbjct: 205 DKSNANLLGVVLNN 218 >BS_ywqD [D] COG0489 ATPases involved in chromosome partitioning Length = 237 Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 102/201 (50%), Positives = 143/201 (71%) Query: 1 VTNPRSPVSEAFRALRTNIDFSSVDEQIQIIMVTSSGPEEGKSTVTANLAAAYAQADKKV 60 +T P+S SE +R +RTNI+F+SVD Q++ +M+TS+ P EGKST ANLA +AQ KKV Sbjct: 18 MTEPKSLNSEQYRTIRTNIEFASVDRQMKSVMITSACPGEGKSTTAANLAVVFAQQGKKV 77 Query: 61 LLIDGDLRKPTAHKTFSLSNRAGLSSLLSQQADLEDVVQDSGVANLSIMTSGPIPPNPAE 120 LLID DLRKPT H F L N GL+S+L +++ +E VQ S +L ++TSGPIPPNPAE Sbjct: 78 LLIDADLRKPTVHTAFFLENTVGLTSVLLKKSSMEQAVQASNEKHLDVLTSGPIPPNPAE 137 Query: 121 MMASNRMSAVLQELRQRYDMILFDTPPLLAVTDAQIIASKSDGVIMVVSYGKVKRDIAAK 180 +++S M + E YDM++FDTPP+LAV DAQI+ + +DG ++V+S GK +++ AAK Sbjct: 138 LLSSKWMKELAYEACAAYDMVIFDTPPILAVADAQILGNVADGSVLVISSGKTEKEQAAK 197 Query: 181 AKANLDRVGAKMLGVVLNNVK 201 AK L +K+LG ++N K Sbjct: 198 AKEALATCKSKLLGAIMNGKK 218 >CAC3040 [D] COG0489 ATPases involved in chromosome partitioning Length = 232 Score = 214 bits (546), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 105/199 (52%), Positives = 143/199 (71%), Gaps = 1/199 (0%) Query: 3 NPRSPVSEAFRALRTNIDFSSVDEQIQIIMVTSSGPEEGKSTVTANLAAAYAQADKKVLL 62 NP+SPV+E++R LR+NI FSS DE+I++I+VTSSGP EGKST ANLA A A+ +VL+ Sbjct: 7 NPKSPVAESYRTLRSNIQFSSFDEEIRVILVTSSGPGEGKSTTAANLALAMAETGNQVLI 66 Query: 63 IDGDLRKPTAHKTFSLSNRAGLSSLLSQQADLEDVVQDSGVANLSIMTSGPIPPNPAEMM 122 +D DLRKP+ HK F LSN +GLS++++ QA ED L ++TSG IPPNPAEM+ Sbjct: 67 VDCDLRKPSIHKKFKLSNSSGLSNIIAGQAKFEDSAHYFN-KKLCVLTSGKIPPNPAEML 125 Query: 123 ASNRMSAVLQELRQRYDMILFDTPPLLAVTDAQIIASKSDGVIMVVSYGKVKRDIAAKAK 182 AS++M L E + + I+ DTPP++AVTD QI+++ DGVI+VVS G + + A +AK Sbjct: 126 ASHKMKEFLNESKGVFKYIILDTPPIIAVTDPQILSTMVDGVILVVSSGVAEIEAAKRAK 185 Query: 183 ANLDRVGAKMLGVVLNNVK 201 L+ V A +LG VLN VK Sbjct: 186 ELLENVNANILGTVLNKVK 204 >BS_yveL [D] COG0489 ATPases involved in chromosome partitioning Length = 227 Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 102/207 (49%), Positives = 148/207 (71%), Gaps = 1/207 (0%) Query: 1 VTNPRSPVSEAFRALRTNIDFSSVDEQIQIIMVTSSGPEEGKSTVTANLAAAYAQA-DKK 59 V + +S V+E +R +RTNI+FSSV ++ I+VTSS P EGKS ANLAA +AQ +KK Sbjct: 17 VLHNKSVVAEQYRTIRTNIEFSSVQTNLRSILVTSSVPGEGKSFSAANLAAVFAQQQEKK 76 Query: 60 VLLIDGDLRKPTAHKTFSLSNRAGLSSLLSQQADLEDVVQDSGVANLSIMTSGPIPPNPA 119 VLL+D DLRKPT ++TF + N GL+++L A L + VQ + + NL ++TSGP PPNPA Sbjct: 77 VLLVDADLRKPTINQTFQVDNVTGLTNVLVGNASLSETVQKTPIDNLYVLTSGPTPPNPA 136 Query: 120 EMMASNRMSAVLQELRQRYDMILFDTPPLLAVTDAQIIASKSDGVIMVVSYGKVKRDIAA 179 E+++S M ++ E+ +++ +++FD+PPLLAV DAQI+A+++DG ++VV GK K D Sbjct: 137 ELLSSKAMGDLISEIYEQFSLVIFDSPPLLAVADAQILANQTDGSVLVVLSGKTKTDTVL 196 Query: 180 KAKANLDRVGAKMLGVVLNNVKRKASE 206 KAK L++ AK+LG +LN K K SE Sbjct: 197 KAKDALEQSNAKLLGALLNKKKMKKSE 223 >CAC3043 [D] COG0489 ATPases involved in chromosome partitioning Length = 224 Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 101/197 (51%), Positives = 137/197 (69%), Gaps = 1/197 (0%) Query: 4 PRSPVSEAFRALRTNIDFSSVDEQIQIIMVTSSGPEEGKSTVTANLAAAYAQADKKVLLI 63 P+SP++EA+R LR+NI FSS D+ +Q+I+VTSSGP EGKST + NLA A A+A VLL+ Sbjct: 8 PKSPIAEAYRTLRSNIQFSSFDKDMQLILVTSSGPGEGKSTTSCNLALAMAEAGNSVLLM 67 Query: 64 DGDLRKPTAHKTFSLSNRAGLSSLLSQQADLEDVVQDSGVANLSIMTSGPIPPNPAEMMA 123 D DLRKP+ HK F +SN GLS++L+ E+ + NL I+T+G IPPNPAEM+A Sbjct: 68 DCDLRKPSVHKKFKISNNDGLSNVLAGHTKFEN-ASNWYSKNLCILTAGKIPPNPAEMLA 126 Query: 124 SNRMSAVLQELRQRYDMILFDTPPLLAVTDAQIIASKSDGVIMVVSYGKVKRDIAAKAKA 183 S RM A L E R + I+ D PP++AVTD QI+++ DGVI+VV+ G + A +AK Sbjct: 127 SKRMKAFLAEARGVFKYIILDAPPVIAVTDPQILSTMVDGVILVVTSGVADIEAAKRAKE 186 Query: 184 NLDRVGAKMLGVVLNNV 200 L+ V A ++G VLN V Sbjct: 187 LLENVNANIIGSVLNRV 203 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.313 0.128 0.339 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 12,663,023 Number of extensions: 480086 Number of successful extensions: 1886 Number of sequences better than 1.0e-05: 56 Number of HSP's gapped: 1879 Number of HSP's successfully gapped: 56 Length of query: 215 Length of database: 38,378,431 Length adjustment: 102 Effective length of query: 113 Effective length of database: 26,614,363 Effective search space: 3007423019 Effective search space used: 3007423019 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 113 (48.1 bits)