BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0420.0024.p
         (70 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BS_trxA [OC] COG0526 Thiol-disulfide isomerase and thioredoxins        69   1e-12
DR0944 [OC] COG0526 Thiol-disulfide isomerase and thioredoxins         69   2e-12
SA0992 [OC] COG0526 Thiol-disulfide isomerase and thioredoxins         64   5e-11
DRA0164 [OC] COG0526 Thiol-disulfide isomerase and thioredoxins        63   9e-11
lin1196 [OC] COG0526 Thiol-disulfide isomerase and thioredoxins        62   2e-10

>BS_trxA [OC] COG0526 Thiol-disulfide isomerase and thioredoxins
          Length = 127

 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 3/67 (4%), Positives = 9/67 (13%)

Query: 1   MFAPVLEEFEKEANDSIKVVKVNVDENPVTSSLFQIMSIPATIIFKDGKPLYKELGILPK 60
                      +           +       +      +    +  D  P       +  
Sbjct: 34  DVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRG 93

Query: 61  GALQQLV 67
                L 
Sbjct: 94  IPTLLLF 100


>DR0944 [OC] COG0526 Thiol-disulfide isomerase and thioredoxins
          Length = 141

 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 45/67 (67%)

Query: 1   MFAPVLEEFEKEANDSIKVVKVNVDENPVTSSLFQIMSIPATIIFKDGKPLYKELGILPK 60
           + APV+EE   +    +KV KVNVD+NP TS  F++MSIP  I+FKDG+P+   +G  PK
Sbjct: 66  IIAPVIEELAGQYEGRVKVAKVNVDDNPATSGQFRVMSIPTMILFKDGQPVEGMVGAQPK 125

Query: 61  GALQQLV 67
            A + ++
Sbjct: 126 RAFESVL 132


>SA0992 [OC] COG0526 Thiol-disulfide isomerase and thioredoxins
          Length = 104

 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 46/67 (68%)

Query: 1   MFAPVLEEFEKEANDSIKVVKVNVDENPVTSSLFQIMSIPATIIFKDGKPLYKELGILPK 60
           M APVLEE   +      ++K++VDENP T++ +++MSIP  I+FKDG+P+ K +G  PK
Sbjct: 34  MIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPK 93

Query: 61  GALQQLV 67
             L +++
Sbjct: 94  ENLAEVL 100


>DRA0164 [OC] COG0526 Thiol-disulfide isomerase and thioredoxins
          Length = 142

 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 46/67 (68%)

Query: 1   MFAPVLEEFEKEANDSIKVVKVNVDENPVTSSLFQIMSIPATIIFKDGKPLYKELGILPK 60
           +  PVLE+  ++    ++VVKVNVDENP T++ F++ SIP  ++FKDG+ + + +G+  K
Sbjct: 69  VMGPVLEDLARDLPGKVRVVKVNVDENPRTAARFEVRSIPTLLMFKDGEEVDQMVGVTQK 128

Query: 61  GALQQLV 67
            AL+  V
Sbjct: 129 AALRARV 135


>lin1196 [OC] COG0526 Thiol-disulfide isomerase and thioredoxins
          Length = 301

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 2/67 (2%), Positives = 11/67 (16%)

Query: 1  MFAPVLEEFEKEANDSIKVVKVNVDENPVTSSLFQIMSIPATIIFKDGKPLYKELGILPK 60
          +     +             +       V +    +    A     +         +   
Sbjct: 33 ISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGDVELV 92

Query: 61 GALQQLV 67
            + +  
Sbjct: 93 IFVVEGT 99


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.315    0.135    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 4,588,071
Number of extensions: 135207
Number of successful extensions: 479
Number of sequences better than 1.0e-05: 71
Number of HSP's gapped: 481
Number of HSP's successfully gapped: 71
Length of query: 70
Length of database: 38,378,431
Length adjustment: 42
Effective length of query: 28
Effective length of database: 33,534,403
Effective search space: 938963284
Effective search space used: 938963284
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 109 (46.6 bits)