BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0419.0005.p
         (186 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BS_treA [G] COG0366 Glycosidases                                      147   1e-35
VC0911 [G] COG0366 Glycosidases                                       145   5e-35
lin0223 [G] COG0366 Glycosidases                                      144   9e-35
BH0872 [G] COG0366 Glycosidases                                       138   4e-33
BH2903 [G] COG0366 Glycosidases                                       138   5e-33

>BS_treA [G] COG0366 Glycosidases
          Length = 565

 Score =  147 bits (370), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 4/118 (3%), Positives = 16/118 (13%), Gaps = 1/118 (0%)

Query: 2   NLDCAAPGGGKWDTVPWSLLELKKIISNWQTVLH-GKGWNANYLCNHDQPRSVSRFGNDL 60
             D A               +L+   ++                             + +
Sbjct: 282 VEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLM 341

Query: 61  YYRIPSAKMLATFIHMLEGTPYIYQGEELGMTNAGFESIDDYRDVETLNYYEEKRTNG 118
           +         +                            +D +        +  +   
Sbjct: 342 FKMEKILARASKAAGDNAMANQYETLANARQKGIEKYLWNDQQGWYADYDLKSHKVRN 399


>VC0911 [G] COG0366 Glycosidases
          Length = 562

 Score =  145 bits (365), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 83/111 (74%)

Query: 2   NLDCAAPGGGKWDTVPWSLLELKKIISNWQTVLHGKGWNANYLCNHDQPRSVSRFGNDLY 61
           +L    P G KW   P+  L+LK+I ++WQT L+GKGW A + CNHDQPR VSR G+D  
Sbjct: 283 HLKVDYPNGEKWTKAPFDFLQLKQIFNHWQTGLNGKGWGALFWCNHDQPRIVSRLGDDQQ 342

Query: 62  YRIPSAKMLATFIHMLEGTPYIYQGEELGMTNAGFESIDDYRDVETLNYYE 112
           YR+ SAKMLA  IH+++GTPYIYQGEE+GMTN GF SI  YRDVE++N ++
Sbjct: 343 YRVESAKMLAATIHLMQGTPYIYQGEEIGMTNPGFTSIKQYRDVESINIHQ 393


>lin0223 [G] COG0366 Glycosidases
          Length = 553

 Score =  144 bits (363), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 69/118 (58%), Positives = 88/118 (74%), Gaps = 2/118 (1%)

Query: 1   MNLDCAAPGGGKWDTVPWSLLELKKIISNWQTVLHGKGWNANYLCNHDQPRSVSRFGNDL 60
           MNLD  + G  KWD  P  L +LK+ +S WQ  L   GWN+ Y  NHDQPR VSRFGND 
Sbjct: 283 MNLD--SDGDNKWDLKPIYLPDLKENMSEWQVALQENGWNSLYWNNHDQPRIVSRFGNDN 340

Query: 61  YYRIPSAKMLATFIHMLEGTPYIYQGEELGMTNAGFESIDDYRDVETLNYYEEKRTNG 118
            +R+ SAKMLAT +HM++GTPYIYQGEE+GMTN  FE++++YRD+ETLN Y+E++  G
Sbjct: 341 RFRVRSAKMLATCLHMMKGTPYIYQGEEIGMTNVHFETLEEYRDIETLNMYKERKEQG 398


>BH0872 [G] COG0366 Glycosidases
          Length = 559

 Score =  138 bits (348), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 68/118 (57%), Positives = 80/118 (67%), Gaps = 1/118 (0%)

Query: 2   NLDCAAPGGGKWDTVPWSLLELKKIISNWQTVLH-GKGWNANYLCNHDQPRSVSRFGNDL 60
           +L    P G KW         LK+I+S WQ  +H G GWNA + CNHDQPR VSR+GND 
Sbjct: 282 HLKVDYPNGEKWAIGDMDFFALKEILSKWQVGMHKGGGWNALFWCNHDQPRVVSRYGNDG 341

Query: 61  YYRIPSAKMLATFIHMLEGTPYIYQGEELGMTNAGFESIDDYRDVETLNYYEEKRTNG 118
            Y   SAKMLAT IHM++GTPYIYQGEE GMT+  F+ ID YRDVETLNYY+  +  G
Sbjct: 342 KYHEKSAKMLATTIHMMQGTPYIYQGEEFGMTDPKFDRIDQYRDVETLNYYDILKEQG 399


>BH2903 [G] COG0366 Glycosidases
          Length = 561

 Score =  138 bits (348), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 65/108 (60%), Positives = 80/108 (74%)

Query: 11  GKWDTVPWSLLELKKIISNWQTVLHGKGWNANYLCNHDQPRSVSRFGNDLYYRIPSAKML 70
           GKWD  P  L +LK  +S WQ  L   GWN+ Y  NHDQPR VSRFG+D  YR+ SAKML
Sbjct: 293 GKWDLKPLELKDLKASLSRWQKGLQDIGWNSLYWNNHDQPRIVSRFGDDQSYRVESAKML 352

Query: 71  ATFIHMLEGTPYIYQGEELGMTNAGFESIDDYRDVETLNYYEEKRTNG 118
           AT +H ++GTP+IYQGEE+GMTN  F+SI+ Y+D+ETLN Y+EKR  G
Sbjct: 353 ATLLHCMKGTPFIYQGEEIGMTNVRFDSIEQYQDIETLNMYKEKRAQG 400


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.318    0.138    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 13,056,206
Number of extensions: 485095
Number of successful extensions: 674
Number of sequences better than 1.0e-05: 37
Number of HSP's gapped: 657
Number of HSP's successfully gapped: 37
Length of query: 186
Length of database: 38,378,431
Length adjustment: 100
Effective length of query: 86
Effective length of database: 26,845,031
Effective search space: 2308672666
Effective search space used: 2308672666
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)