BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0402.0001.p (407 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CAC2237 [G] COG0448 ADP-glucose pyrophosphorylase 400 e-111 BH1087 [G] COG0448 ADP-glucose pyrophosphorylase 399 e-111 BS_glgC [G] COG0448 ADP-glucose pyrophosphorylase 397 e-110 FN0855 [G] COG0448 ADP-glucose pyrophosphorylase 384 e-106 SP1122 [G] COG0448 ADP-glucose pyrophosphorylase 355 6e-98 >CAC2237 [G] COG0448 ADP-glucose pyrophosphorylase Length = 380 Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust. Identities = 205/376 (54%), Positives = 271/376 (72%), Gaps = 12/376 (3%) Query: 1 MSKKECIAMLLAGGEGRRLAPLTSTMAKPAVPFGGQYRIIDFPLSNCVNSNIDTVGVLTQ 60 MSKKE IAM+LAGG+G RL LT AKPAVPFGG+YRIIDF LSNC NS IDTVGVLTQ Sbjct: 1 MSKKEIIAMILAGGQGSRLGILTRRTAKPAVPFGGKYRIIDFTLSNCSNSGIDTVGVLTQ 60 Query: 61 YEADSLHNHIGEGEPWGLHTQSNKGVKLLPSGVE--GRDSYTGTADAIYKNIEFIDSHHP 118 Y+ +L++HIG G PW L S GV +LP ++ G + Y GTA+AIY+N FI+++ P Sbjct: 61 YKPLALNSHIGIGSPWDLDRTSG-GVSVLPPYMKETGGNWYKGTANAIYQNRHFIENYDP 119 Query: 119 EHVLILSADHIYHMNYRKMLDYHLSKNAKATISVMEVPWEEASRFGVMNVNDELKISEFA 178 E+V+ILS DHIY MNY +MLD+H KNA ATI+V EVP EASRFG+MN +++ +I+EF Sbjct: 120 EYVVILSGDHIYKMNYLEMLDFHKKKNADATIAVFEVPLNEASRFGIMNTDEDDRINEFE 179 Query: 179 EKPKVPKSNLASMGIYLFEWKYLKEHLLQDAADSASSHDFGKDVIPKMLDGNEDLFAYRF 238 EKPK PK+NLASMGIY+F W++LK L +DA D +S++DFGK++IP ML+ L+AYRF Sbjct: 180 EKPKKPKNNLASMGIYIFNWRFLKRFLEEDARDESSNNDFGKNIIPNMLNKKRKLYAYRF 239 Query: 239 NGYWRDVGTVGSLWEAHMDLLHEGNGFKLDNSRWPMYSRARRTKPVAHKPRIQLPSAD-- 296 NGYW+DVGT+ SLWEA+MDLL + N + + +W +YS T P P+ ++D Sbjct: 240 NGYWKDVGTIQSLWEANMDLLDDNNSLNIYDPKWKIYS-VNPTMP----PQYIACNSDVK 294 Query: 297 -SLVNDSCLLEGSLNRSVVFGGVEVGKLSLVKQSVIMPGVRIGRGVLIENAIIGEGAVIK 355 SLV + C++ G + SV+F GV +G+ +++ SVIMP V +G V+I+ +IIG A + Sbjct: 295 RSLVVEGCIVLGKVYNSVLFPGVYIGRDTIITNSVIMPNVIVGNNVIIKKSIIGSNARVD 354 Query: 356 DGAVIKGSPDNIVVVG 371 D VI G+ DNI VVG Sbjct: 355 DN-VIVGTNDNISVVG 369 >BH1087 [G] COG0448 ADP-glucose pyrophosphorylase Length = 383 Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust. Identities = 202/371 (54%), Positives = 260/371 (70%), Gaps = 6/371 (1%) Query: 3 KKECIAMLLAGGEGRRLAPLTSTMAKPAVPFGGQYRIIDFPLSNCVNSNIDTVGVLTQYE 62 KKE + MLLAGGEG+RL LT +AKPAV FGG+YRIIDFPLSNC NS IDTVGVLTQYE Sbjct: 2 KKEIVGMLLAGGEGKRLGQLTRKLAKPAVYFGGKYRIIDFPLSNCTNSGIDTVGVLTQYE 61 Query: 63 ADSLHNHIGEGEPWGLHTQSNKGVKLLPSGVE--GRDSYTGTADAIYKNIEFIDSHHPEH 120 +L+ HIG G PW L + + GV +LP +E G Y GTADAIY+N +I+ + PE+ Sbjct: 62 PLALNGHIGIGSPWDLD-RRHGGVTVLPPYIEKQGGSWYKGTADAIYQNRYYIEQYDPEY 120 Query: 121 VLILSADHIYHMNYRKMLDYHLSKNAKATISVMEVPWEEASRFGVMNVNDELKISEFAEK 180 VLILS DHIY M+Y +M+ +H A ATISV+EVPWEEASRFG+MN N+E+ I++F EK Sbjct: 121 VLILSGDHIYKMDYDRMISHHKKLGADATISVIEVPWEEASRFGIMNTNEEMTITQFEEK 180 Query: 181 PKVPKSNLASMGIYLFEWKYLKEHLLQDAADSASSHDFGKDVIPKMLDGNEDLFAYRFNG 240 P P SNLASMGIY+F W LK +L+QDA + SSHDFGKD+IPKML + L AY F G Sbjct: 181 PTTPISNLASMGIYIFNWSVLKSYLIQDAKQANSSHDFGKDIIPKMLAKDLKLVAYPFEG 240 Query: 241 YWRDVGTVGSLWEAHMDLLHEGNGFKLDNSRWPMYSRARRTKPVAHKPRIQLPSADSLVN 300 YW+DVGT+ S WEA+MDLL E + L++ W +YS R P R + SLVN Sbjct: 241 YWKDVGTIKSYWEANMDLLDEHSSLMLNDPSWRIYSVNRNQPPQYISTRAYVRC--SLVN 298 Query: 301 DSCLLEGSLNRSVVFGGVEVGKLSLVKQSVIMPGVRIGRGVLIENAIIGEGAVIKDGAVI 360 + C++ G++ +S++F GV +G S V +SV+MP V++G V++ II EGA I G + Sbjct: 299 EGCVVHGNVEQSILFPGVHIGANSSVFESVLMPNVKVGENVVLRRTIIMEGACIPSGTHL 358 Query: 361 KGS-PDNIVVV 370 S PD+I+V+ Sbjct: 359 APSDPDDILVI 369 >BS_glgC [G] COG0448 ADP-glucose pyrophosphorylase Length = 380 Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust. Identities = 202/367 (55%), Positives = 258/367 (70%), Gaps = 9/367 (2%) Query: 3 KKECIAMLLAGGEGRRLAPLTSTMAKPAVPFGGQYRIIDFPLSNCVNSNIDTVGVLTQYE 62 KK+C+AMLLAGG+G RL+ LT MAKPAV FGG+YRIIDF LSNC NS IDTVG+LTQY+ Sbjct: 2 KKQCVAMLLAGGKGSRLSGLTKNMAKPAVSFGGKYRIIDFTLSNCSNSGIDTVGILTQYQ 61 Query: 63 ADSLHNHIGEGEPWGLHTQSNKGVKLLPSGVEGRDS--YTGTADAIYKNIEFIDSHHPEH 120 L+++IG G W L + N GV +LP E + Y GTA +IY+N+ +++ + PE+ Sbjct: 62 PLELNSYIGIGSAWDLD-RYNGGVTVLPPYAESSEVKWYKGTASSIYENLNYLNQYDPEY 120 Query: 121 VLILSADHIYHMNYRKMLDYHLSKNAKATISVMEVPWEEASRFGVMNVNDELKISEFAEK 180 VLILS DHIY M+Y KMLDYH+ K A TISV+EV WEEASRFG+M N + I+ F EK Sbjct: 121 VLILSGDHIYKMDYGKMLDYHIEKKADVTISVIEVGWEEASRFGIMKANPDGTITHFDEK 180 Query: 181 PKVPKSNLASMGIYLFEWKYLKEHLLQDAADSASSHDFGKDVIPKMLDGNEDLFAYRFNG 240 PK PKSNLASMGIY+F W LK++L D + SSHDFGKD+IP +L+ + L AY F G Sbjct: 181 PKFPKSNLASMGIYIFNWPLLKQYLEMDDQNPYSSHDFGKDIIPLLLEEKKKLSAYPFKG 240 Query: 241 YWRDVGTVGSLWEAHMDLLHEGNGFKLDNSRWPMYSRARRTKP--VAHKPRIQLPSADSL 298 YW+DVGTV SLWEA+MDLL E + KL +W +YS P ++ ++Q DSL Sbjct: 241 YWKDVGTVQSLWEANMDLLKEDSELKLFERKWKIYSVNPNQPPQFISSDAQVQ----DSL 296 Query: 299 VNDSCLLEGSLNRSVVFGGVEVGKLSLVKQSVIMPGVRIGRGVLIENAIIGEGAVIKDGA 358 VN+ C++ G+++ SV+F GV VGK + V SVIMP V IG V+IENAI+ G V+ DGA Sbjct: 297 VNEGCVVYGNVSHSVLFQGVTVGKHTTVTSSVIMPDVTIGEHVVIENAIVPNGMVLPDGA 356 Query: 359 VIKGSPD 365 VI+ D Sbjct: 357 VIRSEKD 363 >FN0855 [G] COG0448 ADP-glucose pyrophosphorylase Length = 384 Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust. Identities = 195/386 (50%), Positives = 255/386 (66%), Gaps = 7/386 (1%) Query: 1 MSKKECIAMLLAGGEGRRLAPLTSTMAKPAVPFGGQYRIIDFPLSNCVNSNIDTVGVLTQ 60 M KK IAM+LAGG+G RL LT +AKPAV FGG+YRIIDF L+NC NS IDTVGVLTQ Sbjct: 3 MKKKRIIAMILAGGQGTRLKELTEDLAKPAVAFGGKYRIIDFTLTNCSNSGIDTVGVLTQ 62 Query: 61 YEADSLHNHIGEGEPWGLHTQSNKGVKLLPSGVEGRDS---YTGTADAIYKNIEFIDSHH 117 YE L+NHIG G PW L + + GV +L D Y GTA+AIY+NI+FI+ + Sbjct: 63 YEPRILNNHIGRGSPWDLD-RMDGGVTVLQPHTRKNDEKGWYKGTANAIYQNIKFIEEYD 121 Query: 118 PEHVLILSADHIYHMNYRKMLDYHLSKNAKATISVMEVPWEEASRFGVMNVNDELKISEF 177 PE+VLILS DHIY MNY KML +H+ K+A ATI V +VP +A FG+MN D++ I EF Sbjct: 122 PEYVLILSGDHIYKMNYDKMLQFHIQKDADATIGVFKVPLVDAPSFGIMNTKDDMSIYEF 181 Query: 178 AEKPKVPKSNLASMGIYLFEWKYLKEHLLQDAADSASSHDFGKDVIPKMLDGNEDLFAYR 237 EKPK PKS+LASMGIY+F WK LK++L +D D SS+DFGK++IP ML+ + +FAY Sbjct: 182 EEKPKEPKSDLASMGIYIFNWKLLKKYLDEDEKDPNSSNDFGKNIIPNMLNDGKKMFAYP 241 Query: 238 FNGYWRDVGTVGSLWEAHMDLLHEGNGFKLDNSRWPMYSRARRTKPVAHKPRIQLPSADS 297 F GYWRDVGT+ S W+AHMDLL E N L + W + +R P ++ ++ Sbjct: 242 FKGYWRDVGTIQSFWDAHMDLLSEDNELDLFDKSWRVNTRQGIYTPSYFTKESKI--KNT 299 Query: 298 LVNDSCLLEGSLNRSVVFGGVEVGKLSLVKQSVIMPGVRIGRGVLIENAIIGEGAVIKDG 357 L++ C++EG + SV+F GV++GK S + S+IM IG V I+ AII I D Sbjct: 300 LIDKGCIVEGEIEHSVIFSGVKIGKNSKIIDSIIMADTEIGDNVTIQKAIIANDVKIVDN 359 Query: 358 AVIKGSPDNIVVVGPHEIVAAKPVIK 383 VI G I VVG +I+ ++ ++K Sbjct: 360 IVI-GDGKKIAVVGEKKIIDSQSLVK 384 >SP1122 [G] COG0448 ADP-glucose pyrophosphorylase Length = 380 Score = 355 bits (912), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 184/377 (48%), Positives = 247/377 (65%), Gaps = 6/377 (1%) Query: 3 KKECIAMLLAGGEGRRLAPLTSTMAKPAVPFGGQYRIIDFPLSNCVNSNIDTVGVLTQYE 62 K E +A++LAGG+G RL LT ++AKPAV FGG+YRIIDF LSNC NS I VGV+TQY+ Sbjct: 2 KNEMLALILAGGQGTRLGKLTQSIAKPAVQFGGRYRIIDFALSNCANSGIHNVGVVTQYQ 61 Query: 63 ADSLHNHIGEGEPWGLHTQSNKGVKLLP--SGVEGRDSYTGTADAIYKNIEFIDSHHPEH 120 +L+NHIG G WGL N GV +L S EG + GT+ AIY+NI++IDS +PE+ Sbjct: 62 PLALNNHIGNGSSWGLDG-INSGVSILQPYSASEGNRWFEGTSHAIYQNIDYIDSVNPEY 120 Query: 121 VLILSADHIYHMNYRKMLDYHLSKNAKATISVMEVPWEEASRFGVMNVNDELKISEFAEK 180 VLILS DHIY M+Y ML H NA T++V++VP +EASRFG+MN + +I EF EK Sbjct: 121 VLILSGDHIYKMDYDDMLQSHKDNNASLTVAVLDVPLKEASRFGIMNTDANNRIVEFEEK 180 Query: 181 PKVPKSNLASMGIYLFEWKYLKEHLLQDAADSASSHDFGKDVIPKMLDGNEDLFAYRFNG 240 P PKS ASMGIY+F+W+ L+ L+ DFGK+VIP L+ E ++AY F+G Sbjct: 181 PAQPKSTKASMGIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLESGESVYAYEFSG 240 Query: 241 YWRDVGTVGSLWEAHMDLLHEGNGFKLDNSRWPMYSRARRTKPVAHKPRIQLPSADSLVN 300 YW+DVGT+ SLWEA+M+ + N N +W +YSR + P + DSLV Sbjct: 241 YWKDVGTIESLWEANMEYISPENALDSRNRQWKIYSRNLISPPNFLGANAHVE--DSLVV 298 Query: 301 DSCLLEGSLNRSVVFGGVEVGKLSLVKQSVIMPGVRIGRGVLIENAIIGEGAVIKDGAVI 360 D C ++G++ S++ G +V + + V SVIM G IG+G I+ AIIGEGA+I DG I Sbjct: 299 DGCFVDGTVKHSILSTGAQVREGAEVLDSVIMSGAIIGQGAKIKRAIIGEGAIISDGVEI 358 Query: 361 KGSPDNIVVVGPHEIVA 377 G+ D + VVG +E+V Sbjct: 359 DGT-DEVQVVGYNEVVG 374 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.317 0.136 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 31,583,233 Number of extensions: 1442529 Number of successful extensions: 2856 Number of sequences better than 1.0e-05: 81 Number of HSP's gapped: 2699 Number of HSP's successfully gapped: 82 Length of query: 407 Length of database: 38,378,431 Length adjustment: 109 Effective length of query: 298 Effective length of database: 25,807,025 Effective search space: 7690493450 Effective search space used: 7690493450 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 117 (49.7 bits)