BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0397.0018.p
         (171 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGc4205 [O] COG1975 Xanthine and CO dehydrogenases maturation fa...   134   7e-32
PA1885 [KR] COG0454 Histone acetyltransferase HPA2 and related a...   127   6e-30
YPO3757 [KR] COG0454 Histone acetyltransferase HPA2 and related ...   115   2e-26

>AGc4205 [O] COG1975 Xanthine and CO dehydrogenases maturation factor,
           XdhC/CoxF family
          Length = 248

 Score =  134 bits (337), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 10/157 (6%), Positives = 31/157 (19%), Gaps = 4/157 (2%)

Query: 18  EIIQQLNTLIIDVVADGASIGFLSPLAAEEAEAYWRGVLA----PGVLLWVAQEGDSIVG 73
             +      I D +          P+     +A                           
Sbjct: 14  AGLGTRMRPITDTIPKPLVKIAGKPMIDYALDALVEAGAETIVVNVHHHAEQMISHLGHR 73

Query: 74  TVQLHPESKPNSPHRAEIAKLMVHPEHRRKGIARMLMETAEQAAVAGGRTLLVLDTREGD 133
           T      S   +        L    +  + G   ++                +    +  
Sbjct: 74  TDAEILISDERTQLMNSGGGLAKGLKLLKPGPVFVMNADLFWIGERLNAVSNLRKLAQFL 133

Query: 134 PSNLLYQSRGFVEVGKIPDYVINSDGEMSATVIYYKH 170
               +  +   V++ +   +    D  ++      ++
Sbjct: 134 DPARMDMALLCVDMDRTTGHNGKRDFNLAGEGKLTRY 170


>PA1885 [KR] COG0454 Histone acetyltransferase HPA2 and related
           acetyltransferases
          Length = 177

 Score =  127 bits (320), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 100/172 (58%), Gaps = 9/172 (5%)

Query: 6   EITIKRLEELQPEIIQQLNTL---IIDVVADGASIGFLSPLAAEEAEAYWRGV----LAP 58
           E TI+RL     EI+ +L+ L   ++D V  GAS+ F+ PL  E A A+WRGV       
Sbjct: 3   EPTIRRLA--GEEILARLDELAEVLLDCVEGGASVSFMWPLPRERALAFWRGVGESVAGD 60

Query: 59  GVLLWVAQEGDSIVGTVQLHPESKPNSPHRAEIAKLMVHPEHRRKGIARMLMETAEQAAV 118
             LL VA+    IVGTVQL  +  PN PHRA++AK++VH   RR+GI   LM   ++ A 
Sbjct: 61  ERLLLVAEAEGRIVGTVQLLLDQPPNQPHRADVAKMLVHRRARRRGIGEALMGELDRLAR 120

Query: 119 AGGRTLLVLDTREGDPSNLLYQSRGFVEVGKIPDYVINSDGEMSATVIYYKH 170
           A G++LLVLDT  G  +  LY   G+  VG+IPDY +  DG    T  +YK 
Sbjct: 121 ACGKSLLVLDTVSGSAAERLYLKTGWTRVGEIPDYALMPDGTPCPTTYFYKR 172


>YPO3757 [KR] COG0454 Histone acetyltransferase HPA2 and related
           acetyltransferases
          Length = 301

 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 14/153 (9%), Positives = 31/153 (20%), Gaps = 7/153 (4%)

Query: 23  LNTLIIDVVADGASIGFLS-PLAAEEAEAYWRGVLAPGV-----LLWVAQEGDSIVGTVQ 76
                  +         ++   A              G      +       +      +
Sbjct: 18  NVGKSTLLNKLLGQKISITSRKAQTTRHRIVGI-HTEGAYQAIYVDTPGLHMEEKRAINR 76

Query: 77  LHPESKPNSPHRAEIAKLMVHPEHRRKGIARMLMETAEQAAVAGGRTLLVLDTREGDPSN 136
           L  ++  +S    E+   +V           +L +  E  A        V + +E     
Sbjct: 77  LMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQEKADLL 136

Query: 137 LLYQSRGFVEVGKIPDYVINSDGEMSATVIYYK 169
              Q             +    G    T+    
Sbjct: 137 PHLQFLASQMNFLDIVPISAETGLNVDTIAAIV 169


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.317    0.135    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 12,889,947
Number of extensions: 511361
Number of successful extensions: 1332
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1345
Number of HSP's successfully gapped: 3
Length of query: 171
Length of database: 38,378,431
Length adjustment: 99
Effective length of query: 72
Effective length of database: 26,960,365
Effective search space: 1941146280
Effective search space used: 1941146280
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 112 (47.8 bits)