BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0391.0036.p (378 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BS_yheN [G] COG0726 Predicted xylanase/chitin deacetylase 186 6e-47 BH3902 [G] COG0726 Predicted xylanase/chitin deacetylase 177 2e-44 CAC1037 [G] COG0726 Predicted xylanase/chitin deacetylase 116 6e-26 L81453_2 [G] COG0726 Predicted xylanase/chitin deacetylase 109 6e-24 all4345 [G] COG0726 Predicted xylanase/chitin deacetylase 100 5e-21 >BS_yheN [G] COG0726 Predicted xylanase/chitin deacetylase Length = 128 Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 0/199 (0%), Positives = 0/199 (0%), Gaps = 4/199 (2%) Query: 176 KTLYLTFDDGPSATTPELLDILNKYGVKATFFMLGPNMNRYPSQVKRIAEEGNGLGLHGM 235 Sbjct: 85 144 Query: 236 THRKEKFYASASAALAEMNGDNDVLRKITGTGTTLIRPPYGSKPYFTKAFRDKVLGQGYH 295 Sbjct: 145 204 Query: 296 LWDWNVDSDDWKYKEDSVTIYNTVMGQVHKLQKSKTNP--VILMHDQKATLKVLPRLLES 353 Sbjct: 205 -- 262 Query: 354 LKKEGYTFGIITKDMEPVN 372 Sbjct: 263 281 >BH3902 [G] COG0726 Predicted xylanase/chitin deacetylase Length = 319 Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 83/198 (41%), Positives = 127/198 (64%), Gaps = 3/198 (1%) Query: 176 KTLYLTFDDGPSATTPELLDILNKYGVKATFFMLGPNMNRYPSQVKRIAEEGNGLGLHGM 235 K +YLTFDDGP+ T +LL +LN+Y +KATFF L P + +YP +I +G+ + LHG+ Sbjct: 122 KIVYLTFDDGPTPATKKLLTLLNEYEMKATFFTLSPKVKQYPDIANQIVADGHAIALHGV 181 Query: 236 THRKEKFYASASAALAEMNGDNDVLRKITGTGTTLIRPPYGSKPYFTKAFRDKVLGQGYH 295 TH++E+FYASA + L EM + + +TG T LIR PYGS P+ T R+ + G+ Sbjct: 182 THQRERFYASAQSPLNEMVENQQTVESVTGVKTNLIRTPYGSYPHLTTEQRNILKEHGFK 241 Query: 296 LWDWNVDSDDWKYKEDSVTIYNTVMGQVHKLQKSKTNPVILMHDQKATLKVLPRLLESLK 355 LWDWNVDS DWK + + T + Q+ + + + VIL HD + T++ + +LL+ L Sbjct: 242 LWDWNVDSYDWKLRNER--FVETTIKQLEN-RAHEASHVILFHDTETTIRHIDKLLDYLV 298 Query: 356 KEGYTFGIITKDMEPVNF 373 ++ Y ++T+DMEP++F Sbjct: 299 EQRYETRLLTEDMEPIHF 316 >CAC1037 [G] COG0726 Predicted xylanase/chitin deacetylase Length = 261 Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 71/193 (36%), Positives = 104/193 (53%), Gaps = 10/193 (5%) Query: 176 KTLYLTFDDGPSA-TTPELLDILNKYGVKATFFMLGPNMNRYPSQVKRIAEEGNGLGLHG 234 KT YLTFDDGPS+ TP +LD L Y VKATFF+ G N + + A+ GN +G+ Sbjct: 68 KTAYLTFDDGPSSNVTPYILDTLKTYDVKATFFVTGKNSIINKLTLSKEAQSGNSIGIKS 127 Query: 235 MTHRKEKFYASASAALAEMNGDNDVLRKITGTG---TTLIRPPYGSKPYFTKAFRDKVLG 291 + K Y+S + + ++N D+LR I G G LIR P GS +K F+ + Sbjct: 128 FDNNITKIYSSPTEYINDINECRDILRAILGDGKFNMKLIRFPGGS-TMVSKNFKKSIKK 186 Query: 292 QGYHLWDWNVDSDDWKYKEDSVTIYNTVMGQVHKLQKSKTNPVILMHD---QKATLKVLP 348 GY+ DW++DS D + + N ++ V K+ +ILMHD +ATL+ LP Sbjct: 187 AGYNFVDWDIDSKDALRTKQKLP--NDIVNSVKSSYKNNDKIIILMHDSSSNEATLQALP 244 Query: 349 RLLESLKKEGYTF 361 +++ LK + Y F Sbjct: 245 EIIQFLKSQNYVF 257 >L81453_2 [G] COG0726 Predicted xylanase/chitin deacetylase Length = 222 Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 100/193 (51%), Gaps = 18/193 (9%) Query: 176 KTLYLTFDDGPSA-TTPELLDILNKYGVKATFFMLGPNMNRYPSQVKRIAEEGNGLGLHG 234 K + LTFDDGP+ TTP+LL I + V ATFF LG P +K A+ GN + H Sbjct: 26 KLIALTFDDGPNPNTTPQLLKIFSDAQVPATFFALGKQAQACPQIIKEEADRGNEVASHT 85 Query: 235 MTHRKEKFYASASAALAEMNGDNDVLRKITGTGTTLIRPPYGSKPYFTKAFRDKVLGQ-G 293 H K+ S E+ N ++ KITG TL RPPYGS + VL Q Sbjct: 86 WDH-KDLVTLSPDQQKQEIESANQLINKITGKNVTLFRPPYGS-------YNKSVLSQTN 137 Query: 294 YHLWDWNVDSDDWKYKEDSVTIYNTVMGQVHKLQKSKTNPVILMHD-QKATLKVLPRLLE 352 +W VD++DW+Y+ + + N V H +ILMHD + ++ +P++++ Sbjct: 138 LSAVNWTVDTNDWRYRTSAPVVQN-VSTYAHD------GAIILMHDIHQWSVDAVPQIIK 190 Query: 353 SLKKEGYTFGIIT 365 +LK +GYTF ++ Sbjct: 191 NLKAQGYTFVTVS 203 >all4345 [G] COG0726 Predicted xylanase/chitin deacetylase Length = 305 Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 17/199 (8%) Query: 176 KTLYLTFDDGP-SATTPELLDILNKYGVKATFFMLGPNMNRYPSQVKRIAEEGNGLGLHG 234 K + LTFDDGP +T ++LDIL + +KATFF++G N+ YP ++R+A EG+ +G H Sbjct: 106 KVIALTFDDGPWPESTTQVLDILKQNNIKATFFVVGQNVKNYPDLLRRVAAEGHAIGNHT 165 Query: 235 MTHRKEKFYASASAALAEMNGDNDVLRKITGTGTTLIRPPYGSKPYFTKAFRDKVLGQGY 294 H + + A E+N +++ +ITG T L RPP G Y Sbjct: 166 WHHWYH--FMNPQVAAYEVNNTTNLIYQITGVKTDLFRPPGG---MMNNGLVSYARNNKY 220 Query: 295 HLWDWNVDSDDWKYKEDSVTIYNTVMGQVHKLQKSKTNPVILMHD----QKATLKVLPRL 350 + W+ DS D Y SV ++ V +L +K ++LMHD + T++ LP + Sbjct: 221 AVIMWSSDSID--YSRPSVP---RLINNVFRL--AKPGGIVLMHDGGGNRTQTVQALPEI 273 Query: 351 LESLKKEGYTFGIITKDME 369 + +K+GY+F + + +E Sbjct: 274 IARFRKQGYSFVTVPELLE 292 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.316 0.134 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 24,931,389 Number of extensions: 927151 Number of successful extensions: 2676 Number of sequences better than 1.0e-05: 36 Number of HSP's gapped: 2627 Number of HSP's successfully gapped: 36 Length of query: 378 Length of database: 38,378,431 Length adjustment: 108 Effective length of query: 270 Effective length of database: 25,922,359 Effective search space: 6999036930 Effective search space used: 6999036930 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 117 (49.7 bits)