BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0382.0007.p (318 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ZybeK [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase 278 6e-75 ybeK [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase 278 6e-75 ZybeK [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase 277 1e-74 ECs0690 [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase 277 1e-74 STM0661 [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase 275 5e-74 >ZybeK [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase Length = 311 Score = 278 bits (712), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 146/308 (47%), Positives = 191/308 (62%), Gaps = 5/308 (1%) Query: 1 MPTPIIIDCDPGHDDXXXXXXXXXHPEQLEIRGITTVGGNQILDKITDNALKVLSFVN-A 59 M PI++DCDPGHDD PE L+++ IT+ GNQ +K N L++L+ +N Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE-LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRT 59 Query: 60 DIXXXXXXXXXXXXXXXTGEQAHGESGMDGPALPASRFKPVEQGAVEFMLEIIRSSEEKI 119 DI + HGESG+DGPALP F P AVE M + +R S E + Sbjct: 60 DIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESAEPV 119 Query: 120 TLVPTAPLTNIALLITAYPEVKEKIEKISLMGGGLAYGNVTTTAEFNIYVDPEAARIVFE 179 T+V T P TN+ALL+ ++PE+ KI +I +MGG + GN T AEFNIYVDPEAA IVF+ Sbjct: 120 TIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWTPAAEFNIYVDPEAAEIVFQ 179 Query: 180 SGIPIVMSGLDVTDKAAIFEEEILELKSRG-PVSVMVGELLDFYSIYGK--KMGYVGSAL 236 SGIP+VM+GLDVT KA I E+ ++ G PVS +V ELLDF+ Y K K G+VG+ L Sbjct: 180 SGIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDFFLEYHKDEKWGFVGAPL 239 Query: 237 HDPCAVAWLLRPELFESEHLHITVETEGRLTRGMTVADRRKKPDRPANTQVLLGVDREAF 296 HDPC +AWLL+PELF S + VET+G+ T+GMTV D N V++ VDR+ F Sbjct: 240 HDPCTIAWLLKPELFTSVERWVGVETQGKYTQGMTVVDYYYLTGNKPNATVMVDVDRQGF 299 Query: 297 MKLLFDAL 304 + LL D L Sbjct: 300 VDLLADRL 307 >ybeK [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase Length = 311 Score = 278 bits (712), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 146/308 (47%), Positives = 191/308 (62%), Gaps = 5/308 (1%) Query: 1 MPTPIIIDCDPGHDDXXXXXXXXXHPEQLEIRGITTVGGNQILDKITDNALKVLSFVN-A 59 M PI++DCDPGHDD PE L+++ IT+ GNQ +K N L++L+ +N Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE-LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRT 59 Query: 60 DIXXXXXXXXXXXXXXXTGEQAHGESGMDGPALPASRFKPVEQGAVEFMLEIIRSSEEKI 119 DI + HGESG+DGPALP F P AVE M + +R S E + Sbjct: 60 DIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESAEPV 119 Query: 120 TLVPTAPLTNIALLITAYPEVKEKIEKISLMGGGLAYGNVTTTAEFNIYVDPEAARIVFE 179 T+V T P TN+ALL+ ++PE+ KI +I +MGG + GN T AEFNIYVDPEAA IVF+ Sbjct: 120 TIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWTPAAEFNIYVDPEAAEIVFQ 179 Query: 180 SGIPIVMSGLDVTDKAAIFEEEILELKSRG-PVSVMVGELLDFYSIYGK--KMGYVGSAL 236 SGIP+VM+GLDVT KA I E+ ++ G PVS +V ELLDF+ Y K K G+VG+ L Sbjct: 180 SGIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDFFLEYHKDEKWGFVGAPL 239 Query: 237 HDPCAVAWLLRPELFESEHLHITVETEGRLTRGMTVADRRKKPDRPANTQVLLGVDREAF 296 HDPC +AWLL+PELF S + VET+G+ T+GMTV D N V++ VDR+ F Sbjct: 240 HDPCTIAWLLKPELFTSVERWVGVETQGKYTQGMTVVDYYYLTGNKPNATVMVDVDRQGF 299 Query: 297 MKLLFDAL 304 + LL D L Sbjct: 300 VDLLADRL 307 Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 146/308 (47%), Positives = 191/308 (62%), Gaps = 5/308 (1%) Query: 1 MPTPIIIDCDPGHDDXXXXXXXXXHPEQLEIRGITTVGGNQILDKITDNALKVLSFVN-A 59 M PI++DCDPGHDD PE L+++ IT+ GNQ +K N L++L+ +N Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE-LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRT 59 Query: 60 DIXXXXXXXXXXXXXXXTGEQAHGESGMDGPALPASRFKPVEQGAVEFMLEIIRSSEEKI 119 DI + HGESG+DGPALP F P AVE M + +R S E + Sbjct: 60 DIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESAEPV 119 Query: 120 TLVPTAPLTNIALLITAYPEVKEKIEKISLMGGGLAYGNVTTTAEFNIYVDPEAARIVFE 179 T+V T P TN+ALL+ ++PE+ KI +I +MGG + GN T AEFNIYVDPEAA IVF+ Sbjct: 120 TIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWTPAAEFNIYVDPEAAEIVFQ 179 Query: 180 SGIPIVMSGLDVTDKAAIFEEEILELKSRG-PVSVMVGELLDFYSIYGK--KMGYVGSAL 236 SGIP+VM+GLDVT KA I E+ ++ G PVS +V ELLDF+ Y K K G+VG+ L Sbjct: 180 SGIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDFFLEYHKDEKWGFVGAPL 239 Query: 237 HDPCAVAWLLRPELFESEHLHITVETEGRLTRGMTVADRRKKPDRPANTQVLLGVDREAF 296 HDPC +AWLL+PELF S + VET+G+ T+GMTV D N V++ VDR+ F Sbjct: 240 HDPCTIAWLLKPELFTSVERWVGVETQGKYTQGMTVVDYYYLTGNKPNATVMVDVDRQGF 299 Query: 297 MKLLFDAL 304 + LL D L Sbjct: 300 VDLLADRL 307 >ECs0690 [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase Length = 311 Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 145/308 (47%), Positives = 191/308 (62%), Gaps = 5/308 (1%) Query: 1 MPTPIIIDCDPGHDDXXXXXXXXXHPEQLEIRGITTVGGNQILDKITDNALKVLSFVN-A 59 M PI++DCDPGHDD PE L+++ IT+ GNQ +K N L++L+ +N Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE-LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRT 59 Query: 60 DIXXXXXXXXXXXXXXXTGEQAHGESGMDGPALPASRFKPVEQGAVEFMLEIIRSSEEKI 119 DI + HGESG+DGPALP F P AVE M + +R S E + Sbjct: 60 DIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESAEPV 119 Query: 120 TLVPTAPLTNIALLITAYPEVKEKIEKISLMGGGLAYGNVTTTAEFNIYVDPEAARIVFE 179 T+V T P TN+ALL+ ++PE+ KI +I +MGG + GN T AEFNIYVDPEAA IVF+ Sbjct: 120 TIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWTPAAEFNIYVDPEAAEIVFQ 179 Query: 180 SGIPIVMSGLDVTDKAAIFEEEILELKSRG-PVSVMVGELLDFYSIYGK--KMGYVGSAL 236 SGIP+VM+GLDVT KA I E+ ++ G PVS +V ELLDF+ Y K K G+VG+ L Sbjct: 180 SGIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDFFLEYHKDEKWGFVGAPL 239 Query: 237 HDPCAVAWLLRPELFESEHLHITVETEGRLTRGMTVADRRKKPDRPANTQVLLGVDREAF 296 HDPC +AWLL+PELF + + VET+G+ T+GMTV D N V++ VDR+ F Sbjct: 240 HDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTVVDYYYLTGNKPNATVMVDVDRQGF 299 Query: 297 MKLLFDAL 304 + LL D L Sbjct: 300 VDLLADRL 307 >STM0661 [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase Length = 311 Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 144/308 (46%), Positives = 191/308 (62%), Gaps = 5/308 (1%) Query: 1 MPTPIIIDCDPGHDDXXXXXXXXXHPEQLEIRGITTVGGNQILDKITDNALKVLSFVN-A 59 M PIIIDCDPGHDD PE LE++ IT+ GNQ +K N L++L+ + Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE-LEVKAITSSAGNQTPEKTLRNVLRMLTLLKRL 59 Query: 60 DIXXXXXXXXXXXXXXXTGEQAHGESGMDGPALPASRFKPVEQGAVEFMLEIIRSSEEKI 119 DI + HGESG+DGPALP F P AVE M + +R S + + Sbjct: 60 DIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPSFAPQSGTAVELMAKTLRESAQPV 119 Query: 120 TLVPTAPLTNIALLITAYPEVKEKIEKISLMGGGLAYGNVTTTAEFNIYVDPEAARIVFE 179 T+V T P TN+ALL+ ++PE+ KI +I +MGG +A GN T AEFNIYVDPEAA IVF+ Sbjct: 120 TIVSTGPQTNVALLLNSHPELHTKIARIVIMGGAMALGNWTPAAEFNIYVDPEAAEIVFQ 179 Query: 180 SGIPIVMSGLDVTDKAAIFEEEILELKSRG-PVSVMVGELLDFYSIYGK--KMGYVGSAL 236 SGIP+VM+GLDVT KA I +I ++ G P+S +V ELLDF+ Y K K G+VG+ L Sbjct: 180 SGIPVVMAGLDVTHKAQIHAADIERFRAIGNPISTIVAELLDFFMEYHKDEKWGFVGAPL 239 Query: 237 HDPCAVAWLLRPELFESEHLHITVETEGRLTRGMTVADRRKKPDRPANTQVLLGVDREAF 296 HDPC +AWLL+PE+F + + VET+G+ T+GMTV D N V++ VDR+ F Sbjct: 240 HDPCTIAWLLKPEIFTTVERWVGVETQGKYTQGMTVVDYYFLTGNKPNATVMVDVDRQGF 299 Query: 297 MKLLFDAL 304 + LL + L Sbjct: 300 VDLLAERL 307 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.318 0.138 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 22,353,764 Number of extensions: 857918 Number of successful extensions: 2557 Number of sequences better than 1.0e-05: 39 Number of HSP's gapped: 2448 Number of HSP's successfully gapped: 39 Length of query: 318 Length of database: 38,378,431 Length adjustment: 106 Effective length of query: 212 Effective length of database: 26,153,027 Effective search space: 5544441724 Effective search space used: 5544441724 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 116 (49.3 bits)