BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0370.0022.p
         (161 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAC2022 [H] COG0521 Molybdopterin biosynthesis enzymes                125   3e-29
Zmog [H] COG0521 Molybdopterin biosynthesis enzymes                    88   7e-18
MT2546 [R] COG2346 Truncated hemoglobins                               88   7e-18
AGc428 [R] COG2346 Truncated hemoglobins                               88   7e-18
AGc4317 [R] COG2346 Truncated hemoglobins                              88   7e-18

>CAC2022 [H] COG0521 Molybdopterin biosynthesis enzymes
          Length = 211

 Score =  125 bits (314), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 14/154 (9%), Positives = 38/154 (24%), Gaps = 1/154 (0%)

Query: 4   KTAILTASDKGARGEREDTSAQVXXXXXXXXXXXXXXXXXIVPDEQDEIIAALIELTDYF 63
           K   L    +        T+  +                       ++  A L  + +  
Sbjct: 3   KAKRLEILTRLRENNPHPTTE-LNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANTP 61

Query: 64  QADLVLTTGGTDLAIRDVTPEATRRVIEREVPGLSEAMRSTVMQKNRAVMLFRGICGIRG 123
            A L L   G    I+ +    ++     +   +     +  + ++RA +      G + 
Sbjct: 62  AAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRKT 121

Query: 124 RTLIVNLPGTPKGVHENLAAIMDQLPEALLMVTG 157
             +++N       +  +                 
Sbjct: 122 ANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKN 155


>Zmog [H] COG0521 Molybdopterin biosynthesis enzymes
          Length = 195

 Score = 87.8 bits (216), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 48/103 (46%), Positives = 60/103 (58%)

Query: 44  IVPDEQDEIIAALIELTDYFQADLVLTTGGTDLAIRDVTPEATRRVIEREVPGLSEAMRS 103
           ++PDEQ  I   L EL D     LVLTTGGT  A RDVTP+AT  V +RE+PG  E MR 
Sbjct: 46  LIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQMRQ 105

Query: 104 TVMQKNRAVMLFRGICGIRGRTLIVNLPGTPKGVHENLAAIMD 146
             +      +L R +  IR + LI+NLPG PK + E L  + D
Sbjct: 106 ISLHFVPTAILSRQVGVIRKQALILNLPGQPKSIKETLEGVKD 148


>MT2546 [R] COG2346 Truncated hemoglobins
          Length = 134

 Score = 87.8 bits (216), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 0/103 (0%), Positives = 0/103 (0%)

Query: 44  IVPDEQDEIIAALIELTDYFQADLVLTTGGTDLAIRDVTPEATRRVIEREVPGLSEAMRS 103
            +   ++ +   L +     +                    +            +     
Sbjct: 46  DLAGAEERLRMFLEQYWGGPRTYSEQRGHPRLRMRHAPFRISLIERDAWLRCMHTAVASI 105

Query: 104 TVMQKNRAVMLFRGICGIRGRTLIVNLPGTPKGVHENLAAIMD 146
                                                      
Sbjct: 106                                             148


>AGc428 [R] COG2346 Truncated hemoglobins
          Length = 195

 Score = 87.8 bits (216), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 48/103 (46%), Positives = 60/103 (58%)

Query: 44  IVPDEQDEIIAALIELTDYFQADLVLTTGGTDLAIRDVTPEATRRVIEREVPGLSEAMRS 103
           ++PDEQ  I   L EL D     LVLTTGGT  A RDVTP+AT  V +RE+PG  E MR 
Sbjct: 46  LIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQMRQ 105

Query: 104 TVMQKNRAVMLFRGICGIRGRTLIVNLPGTPKGVHENLAAIMD 146
             +      +L R +  IR + LI+NLPG PK + E L  + D
Sbjct: 106 ISLHFVPTAILSRQVGVIRKQALILNLPGQPKSIKETLEGVKD 148


>AGc4317 [R] COG2346 Truncated hemoglobins
          Length = 195

 Score = 87.8 bits (216), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 48/103 (46%), Positives = 60/103 (58%)

Query: 44  IVPDEQDEIIAALIELTDYFQADLVLTTGGTDLAIRDVTPEATRRVIEREVPGLSEAMRS 103
           ++PDEQ  I   L EL D     LVLTTGGT  A RDVTP+AT  V +RE+PG  E MR 
Sbjct: 46  LIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQMRQ 105

Query: 104 TVMQKNRAVMLFRGICGIRGRTLIVNLPGTPKGVHENLAAIMD 146
             +      +L R +  IR + LI+NLPG PK + E L  + D
Sbjct: 106 ISLHFVPTAILSRQVGVIRKQALILNLPGQPKSIKETLEGVKD 148


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.319    0.134    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 10,127,324
Number of extensions: 323961
Number of successful extensions: 684
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 675
Number of HSP's successfully gapped: 27
Length of query: 161
Length of database: 38,378,431
Length adjustment: 98
Effective length of query: 63
Effective length of database: 27,075,699
Effective search space: 1705769037
Effective search space used: 1705769037
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)