BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0368.0021.p (264 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value MJ0547 [D] COG0455 ATPases involved in chromosome partitioning 101 1e-21 PAB0954 [D] COG0455 ATPases involved in chromosome partitioning 89 5e-18 PH0612 [D] COG0455 ATPases involved in chromosome partitioning 88 1e-17 PAB1983 [D] COG0455 ATPases involved in chromosome partitioning 83 4e-16 AF0696 [D] COG0455 ATPases involved in chromosome partitioning 83 4e-16 >MJ0547 [D] COG0455 ATPases involved in chromosome partitioning Length = 264 Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 117/206 (56%), Gaps = 9/206 (4%) Query: 21 ANIGTALALQGKKVCLVDTDIGLRNLDVVMGLENRIIYDLVDVAEGRCRLNQALVKDKRF 80 AN+ ALA GKKV ++D DI + NL+++MGLE + + L DV G+ + A+ + Sbjct: 25 ANLAVALAKFGKKVAVLDADIAMANLELIMGLEGKPV-TLNDVLAGKADIKDAIYEGP-- 81 Query: 81 DELYMLPAAQTKDK-TSVTPEQVKDIILELKKEYEYILIDCPAGIEHGFRNAIAGADKAI 139 + + ++PA + +K PE++++++ + E ++IDCPAGI AI+ AD I Sbjct: 82 EGVLVIPAGVSLEKFRRAKPEKLEEVLKAIHDLVEILIIDCPAGIGKETLIAISSADGLI 141 Query: 140 VVTTPEHAAVRDADRIIGLLEQSHVESPKLVVNRIRPGLIKTGDMLDIEDILQVLNIDLI 199 VV PE +++ DA +II + ++ + +VNR+ L ++ I +L + +I Sbjct: 142 VVVNPEISSISDALKIIAITKRLGTDIIGAIVNRVS----NESTELGVKAIETILEVPVI 197 Query: 200 GIVPDDELVIKAANNGEPTV-MNPDS 224 G+VP+D V KAA G P V M PDS Sbjct: 198 GVVPEDPHVRKAAAFGTPLVIMYPDS 223 >PAB0954 [D] COG0455 ATPases involved in chromosome partitioning Length = 245 Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 114/206 (55%), Gaps = 8/206 (3%) Query: 21 ANIGTALALQGKKVCLVDTDIGLRNLDVVMGLENRIIYDLVDVAEGRCRLNQALVKDKRF 80 AN+ AL GKKV VD D+ + NL +V+G+++ + L DV G +L A+ +F Sbjct: 21 ANLSVALGEMGKKVLAVDGDLTMANLSLVLGVDD-VDVTLHDVLAGEAKLQDAIYM-TQF 78 Query: 81 DELYMLPAAQTKDKT-SVTPEQVKDIILELKKEYEYILIDCPAGIEHGFRNAIAGADKAI 139 D +Y+LP A + P ++ ++I LK +Y++ILIDCPAG++ +A+ ++A+ Sbjct: 79 DNVYVLPGAVDWEHVMKADPRKLPEVIKSLKGDYDFILIDCPAGLQLDAMSAMLSGEEAL 138 Query: 140 VVTTPEHAAVRDADRIIGLLEQSHVESPKLVVNRIRPGLIKTGDMLDIEDILQVLNIDLI 199 +VT PE + + D ++ +L ++ + ++NR +T + + + V+++ L+ Sbjct: 139 LVTNPEISCLTDTMKVGIVLRKAGLAILGFILNRYG----RTENDIPPDAAQDVMDVPLL 194 Query: 200 GIVPDDELVIKAANNGEPTV-MNPDS 224 ++P+D + + G P V P+S Sbjct: 195 AVIPEDPAIREGTLEGIPAVKYKPES 220 >PH0612 [D] COG0455 ATPases involved in chromosome partitioning Length = 245 Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 115/206 (55%), Gaps = 8/206 (3%) Query: 21 ANIGTALALQGKKVCLVDTDIGLRNLDVVMGLENRIIYDLVDVAEGRCRLNQALVKDKRF 80 AN+ AL G+KV VD D+ + NL +V+G+++ I L DV G +L A+ +F Sbjct: 21 ANLSVALGEMGRKVLAVDGDLTMANLSLVLGVDDVNI-TLHDVLAGDAKLEDAIYM-TQF 78 Query: 81 DELYMLPAAQTKDKT-SVTPEQVKDIILELKKEYEYILIDCPAGIEHGFRNAIAGADKAI 139 + +Y+LP A + P ++ ++I LK +Y++ILIDCPAG++ +A+ ++AI Sbjct: 79 ENVYILPGAVDWEHVIKADPRKLPEVIKSLKGKYDFILIDCPAGLQLDAMSAMLSGEEAI 138 Query: 140 VVTTPEHAAVRDADRIIGLLEQSHVESPKLVVNRIRPGLIKTGDMLDIEDILQVLNIDLI 199 +VT PE + + D ++ +L+++ + ++NR ++ + E V+++ L+ Sbjct: 139 LVTNPEISCLTDTMKVGMVLKKAGLAILGFILNRYG----RSERDIPPEAAQDVMDVPLL 194 Query: 200 GIVPDDELVIKAANNGEPTV-MNPDS 224 ++P+D ++ + G P V P+S Sbjct: 195 AVIPEDPVIREGTLEGIPAVKYKPES 220 >PAB1983 [D] COG0455 ATPases involved in chromosome partitioning Length = 260 Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 110/206 (53%), Gaps = 9/206 (4%) Query: 21 ANIGTALALQGKKVCLVDTDIGLRNLDVVMGLENRIIYDLVDVAEGRCRLNQALVKDKRF 80 ANIG ALA GK V L+D DI + NL +++G+E+ I L DV G L A+ + Sbjct: 22 ANIGVALAQFGKDVILIDADITMANLSLILGMED-IPVTLHDVLAGEADLKDAIYEGP-- 78 Query: 81 DELYMLPAAQTKDK-TSVTPEQVKDIILELKKEYEYILIDCPAGIEHGFRNAIAGADKAI 139 + ++P + +K E+++D+I E+ + ++ILID PAG+E A+ + I Sbjct: 79 AGVKVIPGGLSLEKIKKARAERLRDLIREISQMGDFILIDAPAGLELTSITALLIGKELI 138 Query: 140 VVTTPEHAAVRDADRIIGLLEQSHVESPKLVVNRIRPGLIKTGDMLDIEDILQVLNIDLI 199 +VT PE AA+ D+ + + E+ ++NR+ L E+I +L + ++ Sbjct: 139 IVTNPEIAAITDSLKTKLVAEKLGTLPLGAILNRV----TSEKTELSREEIEALLEVPVL 194 Query: 200 GIVPDDELVIKAANNGEPTVM-NPDS 224 G VP+D V +A+ G P V+ NP S Sbjct: 195 GTVPEDPEVKRASAYGVPLVVKNPTS 220 >AF0696 [D] COG0455 ATPases involved in chromosome partitioning Length = 263 Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 115/206 (55%), Gaps = 9/206 (4%) Query: 21 ANIGTALALQGKKVCLVDTDIGLRNLDVVMGLENRIIYDLVDVAEGRCRLNQALVKDKRF 80 AN+G ALA G V +VD DI + NL++++G+E + L +V G R+++A+ Sbjct: 21 ANLGVALAQLGHDVTIVDADITMANLELILGMEG-LPVTLQNVLAGEARIDEAIYVGP-- 77 Query: 81 DELYMLPAAQTKDK-TSVTPEQVKDIILELKKEYEYILIDCPAGIEHGFRNAIAGADKAI 139 + ++PA + + PE+++D++ ++ + + +L+D PAG+E AIA A + + Sbjct: 78 GGVKVVPAGVSLEGLRKANPEKLEDVLTQIMESTDILLLDAPAGLERSAVIAIAAAQELL 137 Query: 140 VVTTPEHAAVRDADRIIGLLEQSHVESPKLVVNRIRPGLIKTGDMLDIEDILQVLNIDLI 199 +V PE +++ D + + E+ + +VVNRI G + +I +L +I Sbjct: 138 LVVNPEISSITDGLKTKIVAERLGTKVLGVVVNRI----TTLGIEMAKNEIEAILEAKVI 193 Query: 200 GIVPDDELVIKAANNGEPTVM-NPDS 224 G++P+D V +AA G+P V+ +P+S Sbjct: 194 GLIPEDPEVRRAAAYGKPVVLRSPNS 219 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.319 0.140 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 16,823,544 Number of extensions: 711486 Number of successful extensions: 1986 Number of sequences better than 1.0e-05: 27 Number of HSP's gapped: 1971 Number of HSP's successfully gapped: 27 Length of query: 264 Length of database: 38,378,431 Length adjustment: 104 Effective length of query: 160 Effective length of database: 26,383,695 Effective search space: 4221391200 Effective search space used: 4221391200 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 115 (48.9 bits)