BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0359.0020.p (425 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value MJ0732 [C] COG0426 Uncharacterized flavoproteins 218 1e-56 AF1520 [C] COG0426 Uncharacterized flavoproteins 205 1e-52 MA3743 [C] COG0426 Uncharacterized flavoproteins 196 8e-50 MA3381 [C] COG0426 Uncharacterized flavoproteins 188 2e-47 CAC1027 [C] COG0426 Uncharacterized flavoproteins 181 3e-45 >MJ0732 [C] COG0426 Uncharacterized flavoproteins Length = 393 Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 139/398 (34%), Positives = 206/398 (51%), Gaps = 21/398 (5%) Query: 20 KIAQDTYWVGKIDNREVPFHRLILAKGTTYNSYLLKTGKPTVIDTVDMEFGREYAERLSQ 79 +I YWVG ID FH G+TYNSYL+K K +IDT E +S+ Sbjct: 7 EIKNGIYWVGVIDWEIRDFHGYGTPYGSTYNSYLIKDKKNVLIDTAKDYMFNELIYGISK 66 Query: 80 FMDPMDIEYIVINHTEPDHSGGLAALASRAVNATIVCTAIAVPELQEMYKLQSRNFLIVK 139 F+DP D++YI++NH E DHSG + L + NATI+ L Y + +F+IV Sbjct: 67 FIDPKDLDYIIVNHVEKDHSGCVDKLVEIS-NATIITNEKGKEHLSLYYDTKDWDFIIVD 125 Query: 140 DGDTLDIGGKTLLFKETPYLHTAETMITYCVEDKILFPCDIFSTHVAVEKLFSDEAGFDI 199 GD ++IG +TL F TP LH + M+TYC E+KILF D F H+A + F E G I Sbjct: 126 TGDEINIGDRTLKFIRTPMLHWPDNMLTYCKEEKILFSNDAFGQHIASSERFDYEIGEGI 185 Query: 200 TEDFKGYYSAIIHPHRRYVRTLIEAVQDLDIEMIAPSHGFLIRENVRKYIDLYDVLSRET 259 E K Y++ I+ P++ + I+AV++LDIE+I PSHG + +E + + I+ Y+ + Sbjct: 186 FEHAKDYFANILMPYKMLIPDAIKAVKNLDIELICPSHGVIWKEYINEIIEKYNEWAMNK 245 Query: 260 TEGKKAAIVYTTLKNNTKKMANILQDCLKENHIGTEVWDADKXXXXXXXXXXXXXXXVFV 319 T+ KA IVY T+ N+TKKMA+ + + L E + +++ + V V Sbjct: 246 TKN-KAVIVYDTMYNSTKKMAHAIAEGLMEKGVEVKIYRVCETSLSRIMTEILDAKYVLV 304 Query: 320 GSSTRYADMIGNLEPILQEMKNMNLEGKLAAAFGSYGWSGEAIEVIQDYLNATNMTVQST 379 GS T ++ + L M + K+ AFGSYGW A E I+ Sbjct: 305 GSPTVNRNLYPEVGKFLAYMDCIRPLDKIGVAFGSYGWMECATEKIK------------- 351 Query: 380 SEVIKSTGMIHVEFP-IRVRFSPKDAEKVQKIKNAAEF 416 E+ K+ G V+ + VRF+PK+ + +K EF Sbjct: 352 -EIFKNLGFKIVDDECLTVRFAPKE----EHLKKCYEF 384 >AF1520 [C] COG0426 Uncharacterized flavoproteins Length = 488 Score = 205 bits (522), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 124/348 (35%), Positives = 188/348 (54%), Gaps = 7/348 (2%) Query: 26 YWVGKIDNREVPFHRLILAKGTTYNSYLLKTGKPTVIDTVDMEFGREYAERLSQFMDPMD 85 +WVG ID E FH + A+G TYNSYL+ K ++DTV +F +E ER+ + +DP Sbjct: 110 FWVGAIDWDERDFHNFVTARGLTYNSYLIVDDKVVLVDTVKHKFVKESMERIRKLVDPSQ 169 Query: 86 IEYIVINHTEPDHSGGLAALASRAVNATIVCTAIAVPELQEMYKLQSRNFLIVKDGDTLD 145 I+Y+++NH EPDHS GL A +AT+VCT A + + Y N +VK GDTL Sbjct: 170 IDYVIVNHIEPDHSSGLPDTMRIAKDATVVCTQRAKDGICKYYDCDGWNIQVVKGGDTLK 229 Query: 146 IGGKTLLFKETPYLHTAETMITYCVEDKILFPCDIFSTHVAVEKLFSDEAGFDITEDF-K 204 IG +TL F + LH ++M TY EDKIL D F HVA E F +E G + + K Sbjct: 230 IGKRTLTFIDMTMLHWPDSMATYINEDKILLSNDAFGQHVASEYRFDEEIGVEEALKWAK 289 Query: 205 GYYSAIIHPHRRYVRTLIEAVQD--LDIEMIAPSHGFLIRENVRKYIDLYDVLSR-ETTE 261 YY+ I+ P ++ ++ +++ L+I++IAPSHG ++ +N + I+ YD SR E T Sbjct: 290 VYYANILMPLGGLIQKKLKEIKESGLEIDIIAPSHG-VVWKNPGRIIEAYDRWSRFEPTN 348 Query: 262 GKKAAIVYTTLKNNTKKMANILQDCLKENHIGTEVWDADKXXXXXXXXXXXXXXXVFVGS 321 K IV+ ++ ++T+K+A + + V K + VGS Sbjct: 349 --KVVIVFDSMWHSTEKLAMAIAEGAGSEGADVRVMHIRKDYWTDIVTEILDAKAIAVGS 406 Query: 322 STRYADMIGNLEPILQEMKNMNLEGKLAAAFGSYGWSGEAIEVIQDYL 369 T + + + L +K + + K A AFGSYGW+G A++ +Q L Sbjct: 407 PTIHNGLFPTVAGFLTYLKGLKPQNKKALAFGSYGWNGNAVKEVQKVL 454 >MA3743 [C] COG0426 Uncharacterized flavoproteins Length = 405 Score = 196 bits (497), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 127/407 (31%), Positives = 205/407 (50%), Gaps = 24/407 (5%) Query: 11 EAELMNTEYKIAQDTYWVGKIDNREVPFHRLILAKGTTYNSYLLKTGKPTVIDTVDMEFG 70 E E + +IA+ YWVG ID FH GTTYNSYL+ K +IDTV F Sbjct: 5 ETEKTDGAVEIARGVYWVGAIDWNGRDFHGFTTPGGTTYNSYLVVGEKTALIDTVKAPFA 64 Query: 71 REYAERLSQFMDPMDIEYIVINHTEPDHSGGLAALASRAVNATIVCTAIAVPELQEMYK- 129 E R++Q +DP ++YIV+NH E DH+G LA L + +A I T V L ++ Sbjct: 65 GEMLRRITQIIDPSKLDYIVVNHMELDHAGSLAEL-KKQTDAKIFITKRGVDILNGYFRG 123 Query: 130 LQSRNF--LIVKDGDTLDIGGKTLLFKETPYLHTAETMITYCVEDKILFPCDIFSTHVAV 187 L S N+ +V+ GD LD+GGKTL+F E LH ++M T+ ED+ILF D F H+A Sbjct: 124 LGSENWDLEVVQTGDELDLGGKTLMFLEATMLHWPDSMETFLKEDRILFSNDGFGQHIAT 183 Query: 188 EKLFSDEAGFDITEDFKGYYSAIIHPHRRYVRTLIEAVQDLDIE--MIAPSHGFLIRENV 245 K + E G D+ D YY+ I+ P + + + + ++ IAPSHG + ++++ Sbjct: 184 SKRYDFEVG-DVIPDAAEYYANILMPFHMPLLRFMGVLDKMGVDPLQIAPSHGIIWKQDL 242 Query: 246 RKYIDLYDVLSRETTEGKKAAIVYTTLKNNTKKMANILQDCLKENHIGTEVWDADKXXXX 305 +K ++ Y + +K ++Y T+ +T+ MA + + ++ + ++ + K Sbjct: 243 KKILEAYRAWANGEVN-EKVLVIYDTMWGSTEIMATEIAEAVRAAGVEVKLLNLRKNTRN 301 Query: 306 XXXXXXXXXXXVFVGSSTRYADMIGNLEPILQEMKNMNLEGKLAAAFGSYGWSGEAIEVI 365 VGS T + + L +K + + K A AFGSYGW G A++ + Sbjct: 302 HIMKEMLDAAAFAVGSPTLNNGLFPTVGDFLVYLKGLRPQKKKAVAFGSYGWGGGAVKTV 361 Query: 366 QDYLNATNMTVQSTSEVIKSTGMIHVEFPIRVRFSP--KDAEKVQKI 410 + L K TG+ +E +++R+ P K+ E+ +K+ Sbjct: 362 EKEL--------------KDTGIEVLEPGLQIRYRPYEKELERCRKL 394 >MA3381 [C] COG0426 Uncharacterized flavoproteins Length = 415 Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 121/370 (32%), Positives = 195/370 (52%), Gaps = 16/370 (4%) Query: 20 KIAQDTYWVGKID-NREVPFHRLI-LAKGTTYNSYLLKTGKPT-VIDTVDMEFGREYAER 76 +IA++ + VG D NR + F LI L +GT+YNSYL+K K T +IDTV+ F E + Sbjct: 30 EIARNVFGVGSKDWNRRI-FDSLIPLPEGTSYNSYLVKGEKKTALIDTVNPGFEEELEAK 88 Query: 77 LSQFMDPMDIEYIVINHTEPDHSGGLAALASRAVNATIVCTAIAVPELQEMYKLQSRNFL 136 ++ D ++Y+++NH EPDH+ + + +A A V T V + ++L Sbjct: 89 INMVSDLKKLDYLIMNHAEPDHANAIRFILEKAPEALFVTTKKGVKMAKLYHELPEARIK 148 Query: 137 IVKDGDTLDIGGKTLLFKETPYLHTAETMITYCVEDKILFPCDIFSTHVAVEKLFSDEAG 196 IV +GD+LD+GGKTL F E P+LH ETM TY EDK+LF CD F H A + DE Sbjct: 149 IVAEGDSLDLGGKTLRFIEAPWLHWPETMFTYLPEDKVLFSCDFFGAHTA--QGVYDEEI 206 Query: 197 FDITEDFKGYYSAIIHPHRRYVRTLIEAVQDLDIEMIAPSHGFLIRENVRKYIDLYDVLS 256 ++ K YY I+ P + +E ++DL IE+IAPSHG I +N ++ +D Y+ + Sbjct: 207 EELVSLAKRYYGEIMMPFGKMGARALEKIKDLGIEIIAPSHG-PIYKNPKRILDPYEKWT 265 Query: 257 RETTEGKKAAIVYTTLKNNTKKMANILQDCLKENHIGTEVWDADKXXXXXXXXXXXXXXX 316 + TE KA IVY ++ +T++M + + L + + ++D Sbjct: 266 QGKTE-NKALIVYVSMWGSTREMIRTIAETLLKEGVDVRMYDLVASDIGDVARELVDSRS 324 Query: 317 VFVGSSTRYADMIGNLEPILQE----MKNMNLEGKLAAAFGSYGWSGEAIEVIQDYLNAT 372 + +G+ T ++G + P+ +K +N K GS+GW G A++ + L + Sbjct: 325 IVLGAPT----VLGGMHPLALYGTYLVKALNPPAKYGVVLGSFGWGGGALKQAGELLAPS 380 Query: 373 NMTVQSTSEV 382 + + T +V Sbjct: 381 KIEIVGTLQV 390 >CAC1027 [C] COG0426 Uncharacterized flavoproteins Length = 392 Score = 181 bits (458), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 114/356 (32%), Positives = 180/356 (50%), Gaps = 7/356 (1%) Query: 20 KIAQDTYWVGKIDNREVPFHRLI-LAKGTTYNSYLLKTGKPTVIDTVDMEFGREYAERLS 78 K+ ++ YWVG D + F ++ KG+TYNSYL+ K +IDTV F E+ + + Sbjct: 5 KLCENVYWVGVKDQKLRVFDIIMNTKKGSTYNSYLINDDKVAIIDTVKDGFYDEFLKSIK 64 Query: 79 QFMDPMDIEYIVINHTEPDHSGGLAALASRAVNATIVCTAIAVPELQEMY--KLQSRNFL 136 + ++YIV+ HTE DHSG + L A +V + A L+E+ + S + + Sbjct: 65 SVIGDKKVDYIVVQHTELDHSGSMYRLIKEYPEAKVVSSKAANMYLKEIVNDEFNSLDAM 124 Query: 137 IVKDGDTLDIGGKTLLFKETPYLHTAETMITYCVEDKILFPCDIFSTHVAVEKLFSDEAG 196 VK+ L++G TL F P LH +TM TY E+ ILF CD+ H + DE G Sbjct: 125 EVKE---LNLGKNTLEFISAPNLHWPDTMFTYNKENNILFTCDVMGCHYCPDGSIKDEGG 181 Query: 197 FDITEDFKGYYSAIIHPHRRYVRTLIEAVQDLDIEMIAPSHGFLIRENVRKYIDLYDVLS 256 D + + Y+ I+ P +++V ++ ++DL ++MIAPSHG + ++ + + LY + Sbjct: 182 EDYLPEMRYYFDVIMSPFKKFVNMGLDKIKDLKLDMIAPSHGPVHINDIEESVKLYREWA 241 Query: 257 RET-TEGKKAAIVYTTLKNNTKKMANILQDCLKENHIGTEVWDADKXXXXXXXXXXXXXX 315 +E + K I Y T NT MA L + + + + EV + Sbjct: 242 KEKEPKEKNVQIFYITAYGNTGIMAKHLCEDINKKGVKAEVHEITDMKMEDIVELIADAN 301 Query: 316 XVFVGSSTRYADMIGNLEPILQEMKNMNLEGKLAAAFGSYGWSGEAIEVIQDYLNA 371 V VGS T D + + +L + + GK AAAFGSYGWSGE + ++ D L + Sbjct: 302 GVLVGSPTINQDAVRPVWDVLSSVCPIVNRGKAAAAFGSYGWSGEGVPMMMDRLKS 357 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.319 0.135 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 29,083,644 Number of extensions: 1193333 Number of successful extensions: 2575 Number of sequences better than 1.0e-05: 34 Number of HSP's gapped: 2464 Number of HSP's successfully gapped: 34 Length of query: 425 Length of database: 38,378,431 Length adjustment: 109 Effective length of query: 316 Effective length of database: 25,807,025 Effective search space: 8155019900 Effective search space used: 8155019900 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 117 (49.7 bits)