BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0352.0014.p (432 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value alr1609 [L] COG3464 Transposase and inactivated derivatives 152 9e-37 all7161 [L] COG3464 Transposase and inactivated derivatives 152 1e-36 alr7350 [L] COG3464 Transposase and inactivated derivatives 147 2e-35 alr7305 [L] COG3464 Transposase and inactivated derivatives 147 2e-35 alr2698 [L] COG3464 Transposase and inactivated derivatives 146 6e-35 >alr1609 [L] COG3464 Transposase and inactivated derivatives Length = 359 Score = 152 bits (384), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 0/403 (0%), Positives = 0/403 (0%), Gaps = 34/403 (8%) Query: 3 ILNLSKFNILSISENE-FDFLIQVVTSSPPLACPHCGCIANLYKHDSREQICMDLPIHGK 61 I + + L + V + L + Sbjct: 8 INRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLP-DADAFGVARLEEALRL 66 Query: 62 RVGLLIKRQRYRCRDCNRTFWEHLDHTIDEKRNCTKRLLSYIEKQSLQRTFVSISEDVGL 121 R G + K + + +++ V++ + Sbjct: 67 RAGGITKPVLLLEGFFDARDLPTISA-QHFHTAVHNEEQLAALEEASLDEPVTVWMKLDT 125 Query: 122 HEKTIRNIFRDYINRLKETLRFETPNWLGIDEIHIIKPR----CVLTNIEERTLLDVLPN 177 + L ++ + C T + Sbjct: 126 GMHRLGVRPEQAEAFYHR-LTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTFCEG 184 Query: 178 RNKETVVGYLSGLPNR--GEIQYVTMNMWQPYKDAVRAILPKALIIVDKFHVVRMANQAL 235 + + + G+ +V + + A + + A+ Sbjct: 185 KPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSSLIAV 244 Query: 236 ETIRKQLR------EGLSPKER--RGLMHDRFILLKRHTALTEMDKITLDLWTKNHPSLG 287 + R M + + T + ++ ++ Sbjct: 245 REHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGRVAMD 304 Query: 288 TAYDLKESFFDIWECDSRQTAFLKYNEWKAKIPTELQSAFEPL------TKAMKNWEEEI 341 ++ E + Sbjct: 305 MICVDLGPQAQDKAG---------DPVILWGEGLPVERIAEMTKVSAYELITRLTSRVAM 355 Query: 342 FAYFDHRITNAYMESLNSLIRVINRLGRGY-SFEALRAKILFT 383 Sbjct: 356 398 >all7161 [L] COG3464 Transposase and inactivated derivatives Length = 406 Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 113/403 (28%), Positives = 197/403 (48%), Gaps = 34/403 (8%) Query: 3 ILNLSKFNILSISENE-FDFLIQVVTSSPPLACPHCGCIANLYKHDSREQICMDLPIHGK 61 ILNL + +L E E +I + + +CP+CG + H ++ DLP K Sbjct: 8 ILNLPETKVLDCQEVEGAGIIITIEKAVNHCSCPNCGNVTQSI-HQDHWRMIHDLPWSEK 66 Query: 62 RVGLLIKRQRYRCRDCNRTFWEHLDHTIDEKRNCTKRLLSYIEKQSLQRTFVSISEDVGL 121 V L I R++++C C + F E L+ +++ + TKRL + I +Q L S+++ L Sbjct: 67 PVLLKINRRQFKCHKCKKVFSEKLEF-VEKSKGYTKRLAANIVEQVLNSNIHSVAKRNDL 125 Query: 122 HEKTIRNIFRDYINRLKETLRFETPNWLGIDEIHIIKPR----CVLTNIEERTLLDVLPN 177 ++ + ++ + + ++++ + LGIDEI ++K + V+ +++ R ++++ Sbjct: 126 SDEEVESMLKRQVTQIQK-INLRGLKRLGIDEIALVKGQGNYLAVIVDLDTRKPIEIVKT 184 Query: 178 RNKETVVGYLSG--LPNRGEIQYVTMNMWQPYKDAVRAILPKALIIVDKFHVVRMANQAL 235 R E + + G L +IQ V++++W PYK V ++P A I D+FHV++ N L Sbjct: 185 RRIEEIGEVMKGWGLKVLEQIQEVSIDLWSPYKSLVEELMPNANITADRFHVMKQVNDEL 244 Query: 236 ETIRKQLR------EGLSPKER--RGLMHDRFILLKRHTALTEMDKITLDLWTKNHPSLG 287 +TIRK + E S KER GL ++ L+K +L E KI L + P+L Sbjct: 245 DTIRKSEKKAAMSLEDKSEKERILAGLNKSKYSLIKNEDSLNEEQKIRLKAVQEVSPTLA 304 Query: 288 TAYDLKESFFDIWECDSRQTAFLKYNEWKAKIPTELQSAFEPL------TKAMKNWEEEI 341 + LKE F I+E + W I L ++ + M W EI Sbjct: 305 KMHSLKEKFRQIFES---------HTYWGDSIIQLLDWMYDAMLLFPKSIGTMIRWFGEI 355 Query: 342 FAYFDHRITNAYMESLNSLIRVINRLGRGY-SFEALRAKILFT 383 YFD R T+ +E +N+ +++I RLG G+ +F R + L Sbjct: 356 VGYFDGRTTSGTVEGINNKLKLIKRLGYGFRNFNNFRLRSLLN 398 >alr7350 [L] COG3464 Transposase and inactivated derivatives Length = 359 Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 0/367 (0%), Positives = 0/367 (0%), Gaps = 23/367 (6%) Query: 33 ACPHCGCIANLYKHDSREQICMDLPIHGKRVGLLIKRQRYRCRDCNRTFWEHLDHTIDEK 92 L + R G + K + + Sbjct: 39 GHGLLETARTLP-DADAFGVARLEEALRLRAGGITKPVLLLEGFFDARDLPTIS-AQHFH 96 Query: 93 RNCTKRLLSYIEKQSLQRTFVSISEDVGLHEKTIRNIFRDYINRLKETLRFETPNWLGID 152 +++ V++ + + L ++ Sbjct: 97 TAVHNEEQLAALEEASLDEPVTVWMKLDTGMHRLGVRPEQAEAFYH-RLTQCKNVRQPVN 155 Query: 153 EIHIIKPR----CVLTNIEERTLLDVLPNRNKETVVGYLS--GLPNRGEIQYVTMNMWQP 206 + C T + + + + L + +V + Sbjct: 156 IVSHFARADEPKCGATEKQLAIFNTFCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILY 215 Query: 207 YKDAVRAILPKALIIVDKFHVVRMANQALETIRKQLREGL------SPKER--RGLMHDR 258 + A + + A+ + G R M Sbjct: 216 GVSPLEDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYG 275 Query: 259 FILLKRHTALTEMDKITLDLWTKNHPSLGTAYDLKESFFDIWE-CDSRQTAFLKYNEWKA 317 + + T + ++ ++ E A Sbjct: 276 DGYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIA 335 Query: 318 KIPTELQSAFEPLTKAMKNWEEEIFAYFDHRITNAYMESLNSLIRVINRLGRGY-SFEAL 376 Sbjct: 336 ---- 391 Query: 377 RAKILFT 383 Sbjct: 392 398 >alr7305 [L] COG3464 Transposase and inactivated derivatives Length = 359 Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 0/367 (0%), Positives = 0/367 (0%), Gaps = 23/367 (6%) Query: 33 ACPHCGCIANLYKHDSREQICMDLPIHGKRVGLLIKRQRYRCRDCNRTFWEHLDHTIDEK 92 L + R G + K + + Sbjct: 39 GHGLLETARTLP-DADAFGVARLEEALRLRAGGITKPVLLLEGFFDARDLPTISA-QHFH 96 Query: 93 RNCTKRLLSYIEKQSLQRTFVSISEDVGLHEKTIRNIFRDYINRLKETLRFETPNWLGID 152 +++ V++ + + L ++ Sbjct: 97 TAVHNEEQLAALEEASLDEPVTVWMKLDTGMHRLGVRPEQAEAFYH-RLTQCKNVRQPVN 155 Query: 153 EIHIIKPR----CVLTNIEERTLLDVLPNRNKETVVGYLS--GLPNRGEIQYVTMNMWQP 206 + C T + + + + L + +V + Sbjct: 156 IVSHFARADEPKCGATEKQLAIFNTFCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILY 215 Query: 207 YKDAVRAILPKALIIVDKFHVVRMANQALETIRKQLREGL------SPKER--RGLMHDR 258 + A + + A+ + G R M Sbjct: 216 GVSPLEDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYG 275 Query: 259 FILLKRHTALTEMDKITLDLWTKNHPSLGTAYDLKESFFDIWE-CDSRQTAFLKYNEWKA 317 + + T + ++ ++ E Sbjct: 276 DGYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERI- 334 Query: 318 KIPTELQSAFEPLTKAMKNWEEEIFAYFDHRITNAYMESLNSLIRVINRLGRGY-SFEAL 376 Sbjct: 335 --- 391 Query: 377 RAKILFT 383 Sbjct: 392 398 >alr2698 [L] COG3464 Transposase and inactivated derivatives Length = 359 Score = 146 bits (369), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 0/367 (0%), Positives = 0/367 (0%), Gaps = 23/367 (6%) Query: 33 ACPHCGCIANLYKHDSREQICMDLPIHGKRVGLLIKRQRYRCRDCNRTFWEHLDHTIDEK 92 L + R G + K + + Sbjct: 39 GHGLLETARTLP-DADAFGVARLEEALRLRAGGITKPVLLLEGFFDARDLPTISA-QHFH 96 Query: 93 RNCTKRLLSYIEKQSLQRTFVSISEDVGLHEKTIRNIFRDYINRLKETLRFETPNWLGID 152 +++ V++ + + L ++ Sbjct: 97 TAVHNEEQLAALEEASLDEPVTVWMKLDTGMHRLGVRPEQAEAFYH-RLTQCKNVRQPVN 155 Query: 153 EIHIIKPR----CVLTNIEERTLLDVLPNRNKETVVGYLS--GLPNRGEIQYVTMNMWQP 206 + C T + + + + L + +V + Sbjct: 156 IVSHFARADEPKCGATEKQLAIFNTFCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILY 215 Query: 207 YKDAVRAILPKALIIVDKFHVVRMANQALETIRKQLREGL------SPKER--RGLMHDR 258 + A + + A+ + G R M Sbjct: 216 GVSPLEDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYG 275 Query: 259 FILLKRHTALTEMDKITLDLWTKNHPSLGTAYDLKESFFDIWE-CDSRQTAFLKYNEWKA 317 + + T + ++ ++ E A Sbjct: 276 DGYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIA 335 Query: 318 KIPTELQSAFEPLTKAMKNWEEEIFAYFDHRITNAYMESLNSLIRVINRLGRGY-SFEAL 376 Sbjct: 336 ---- 391 Query: 377 RAKILFT 383 Sbjct: 392 398 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.323 0.139 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 31,444,309 Number of extensions: 1285972 Number of successful extensions: 4012 Number of sequences better than 1.0e-05: 41 Number of HSP's gapped: 3951 Number of HSP's successfully gapped: 41 Length of query: 432 Length of database: 38,378,431 Length adjustment: 109 Effective length of query: 323 Effective length of database: 25,807,025 Effective search space: 8335669075 Effective search space used: 8335669075 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 117 (49.7 bits)