BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0349.0008.p (660 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SA1188 [L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, t... 733 0.0 BH2140 [L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, t... 722 0.0 lin1325 [L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, ... 721 0.0 SP0852 [L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, t... 719 0.0 L0290 [L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, to... 716 0.0 >SA1188 [L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit Length = 665 Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/639 (57%), Positives = 472/639 (73%), Gaps = 14/639 (2%) Query: 22 YDADDIQVLEGLVAVRKRPGMYIGSTSSSGLHHLVWEIVDNAVDEHLAKFCSKIDITLRK 81 Y D IQVLEGL AVRKRPGMYIGST GLHHLV+EIVDN+VDE L + ++ID+T+ K Sbjct: 9 YSDDSIQVLEGLEAVRKRPGMYIGSTDKRGLHHLVYEIVDNSVDEVLNGYGNEIDVTINK 68 Query: 82 DGSVTVLDNGRGIPTGMHKTGVPTPQVVFTILHAXXXXXXXXXXXXXXLHGVGASVTNAL 141 DGS+++ DNGRG+PTG+HK+G PT +V+FT+LHA LHGVGASV NAL Sbjct: 69 DGSISIEDNGRGMPTGIHKSGKPTVEVIFTVLHAGGKFGQGGYKTSGGLHGVGASVVNAL 128 Query: 142 SEWLEVEIYRDGKIHRQRFEYWVDKSGKEHVGEPVTGLEILGNTNKTGSKITFKPDIRVF 201 SEWLEVEI+RDG I+ Q F K+G G P +GL G T KTG+K+TFKPD +F Sbjct: 129 SEWLEVEIHRDGSIYHQSF-----KNG----GSPSSGLVKKGKTKKTGTKVTFKPDDTIF 179 Query: 202 PNGIALNYDTLAERVQEIAFLNSGLRIILTDERSG--RQDEYFYEGGASQFVQFLNEGKD 259 + N+D L+ER+QE AFL L+I L D RSG RQ+ Y YE G +FV ++NEGK+ Sbjct: 180 KASTSFNFDVLSERLQESAFLLKNLKITLNDLRSGKERQEHYHYEEGIKEFVSYVNEGKE 239 Query: 260 VLHDVIHFSSEKDDIEVEVALQYNAGYTETLASFVNSIPTRSGGTHETGFKTAYTRVLNE 319 VLHDV FS E + IEV+VA QYN Y+E++ SFVN++ T+ GGTHE GFKTA TRV N+ Sbjct: 240 VLHDVATFSGEANGIEVDVAFQYNDQYSESILSFVNNVRTKDGGTHEVGFKTAMTRVFND 299 Query: 320 YARRTQLLKEKDKNLEGNDLREGMMAVISVKMAE--VEFVGQTKDQLGSASARSAVDYIV 377 YARR LK KDKNL+GND+REG+ AV+SV++ E ++F GQTK +LG++ ARSAVD +V Sbjct: 300 YARRINELKTKDKNLDGNDIREGLTAVVSVRIPEELLQFEGQTKSKLGTSEARSAVDSVV 359 Query: 378 AENMARFLEENPQVAQSLLKKSIQXXXXXXXXXXXXDEIRSGKK-RSESSNLGGKLSPAQ 436 A+ + +LEE Q+++SL+KK+I+ ++ RSGKK + + + L GKL+PAQ Sbjct: 360 ADKLPFYLEEKGQLSKSLVKKAIKAQQAREAARKAREDARSGKKNKRKDTLLSGKLTPAQ 419 Query: 437 SKDVTRTELFIVEGDSAGGSAKQGRDSKIQAILPLKGKPMNSEKAKLLDVLKNDEFKXXX 496 SK+ + EL++VEGDSAGGSAK GRD K QAILPL+GK +N+EKA+L D+ KN+E Sbjct: 420 SKNTEKNELYLVEGDSAGGSAKLGRDRKFQAILPLRGKVINTEKARLEDIFKNEEINTII 479 Query: 497 XXXXXXXXPDFAVEDSNYSKIIIMTDADTDGAHIQVLLLTFFYRYMKPLIDAGKVYIAQP 556 DF +EDSNY+++IIMTDADTDGAHIQVLLLTFF++YMKPL+ AG+V+IA P Sbjct: 480 HTIGAGVGTDFKIEDSNYNRVIIMTDADTDGAHIQVLLLTFFFKYMKPLVQAGRVFIALP 539 Query: 557 PLYKLTRKSGKLETVRYAWSDEELANYLKEFGKNFELQRYKGLGEMNPEQLWETTMNPES 616 PLYKL + GK + V YAW+DEEL KE GK F LQRYKGLGEMNPEQLWETTMNPE+ Sbjct: 540 PLYKLEKGKGKTKRVEYAWTDEELNKLQKELGKGFTLQRYKGLGEMNPEQLWETTMNPET 599 Query: 617 RNLLQVQIEDAAKAERRVSTLMGDKVDPRKRWIVENVDF 655 R L++VQ+ED ++ +RV+TLMGDKV PR+ WI ++V+F Sbjct: 600 RTLIRVQVEDEVRSSKRVTTLMGDKVQPRREWIEKHVEF 638 >BH2140 [L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit Length = 655 Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/642 (56%), Positives = 465/642 (72%), Gaps = 13/642 (2%) Query: 22 YDADDIQVLEGLVAVRKRPGMYIGSTSSSGLHHLVWEIVDNAVDEHLAKFCSKIDITLRK 81 Y+ D IQVLEGL AVRKRPGMYIGST S GLHHLV+EIVDNAVDE LA + S I++T+ K Sbjct: 9 YNDDAIQVLEGLEAVRKRPGMYIGSTDSRGLHHLVYEIVDNAVDEALAGYGSNINVTIHK 68 Query: 82 DGSVTVLDNGRGIPTGMHKTGVPTPQVVFTILHAXXXXXXXXXXXXXXLHGVGASVTNAL 141 D SV+V D GRG+PTGMHK G PTP+V+ T+LHA LHGVGASV NAL Sbjct: 69 DQSVSVRDEGRGMPTGMHKLGKPTPEVILTVLHAGGKFGQGGYATSGGLHGVGASVVNAL 128 Query: 142 SEWLEVEIYRDGKIHRQRFEYWVDKSGKEHVGEPVTGLEILGNTNKTGSKITFKPDIRVF 201 SEWL VEI RDG ++ QRFE + G+P T LE G T +TG+ I FKPD VF Sbjct: 129 SEWLIVEIKRDGWVYEQRFE---------NGGKPSTTLEKKGKTRQTGTTIHFKPDPTVF 179 Query: 202 PNGIALNYDTLAERVQEIAFLNSGLRIILTDERSGRQDEYFYEGGASQFVQFLNEGKDVL 261 N +TL+ER++E AFL GL+I L D R ++ + YE G FV++LNE K+ L Sbjct: 180 ST-TNFNVETLSERLREAAFLLKGLKIELVDLRDDTKEVFHYEDGIKAFVEYLNEDKETL 238 Query: 262 HDVIHFSSEKDDIEVEVALQYNAGYTETLASFVNSIPTRSGGTHETGFKTAYTRVLNEYA 321 H V+ F+ E + IE+E A Q+N GYTE + SFVN++ T+ GGTHE G KTA TR +NEYA Sbjct: 239 HPVVFFNGESNGIEIEFAFQFNDGYTENVLSFVNNVRTKDGGTHELGAKTAMTRAVNEYA 298 Query: 322 RRTQLLKEKDKNLEGNDLREGMMAVISVKMAE--VEFVGQTKDQLGSASARSAVDYIVAE 379 R+ +LLKEKDKNL+G+D+REG A+ISV++ E ++F GQTK +LG+ ARSAVD +V+E Sbjct: 299 RKAKLLKEKDKNLDGSDIREGFTALISVRVPEEKLQFEGQTKGKLGTPEARSAVDSLVSE 358 Query: 380 NMARFLEENPQVAQSLLKKSIQXXXXXXXXXXXXDEIRSGKK-RSESSNLGGKLSPAQSK 438 ++ F EENP+++ L++K+I+ +E RSGKK R L GKL+PAQSK Sbjct: 359 KLSFFFEENPEMSSMLIRKAIKAAQAREAARKAREEARSGKKNRRRDVLLSGKLTPAQSK 418 Query: 439 DVTRTELFIVEGDSAGGSAKQGRDSKIQAILPLKGKPMNSEKAKLLDVLKNDEFKXXXXX 498 + R EL++VEGDSAGGSAKQGRD K QA+LPL+GK +N+EKAK+ D++KN+E + Sbjct: 419 NPQRNELYLVEGDSAGGSAKQGRDRKFQAVLPLRGKVINTEKAKIDDIMKNEEIRTIIHT 478 Query: 499 XXXXXXPDFAVEDSNYSKIIIMTDADTDGAHIQVLLLTFFYRYMKPLIDAGKVYIAQPPL 558 DF ++D NY K++IMTDADTDGAHIQVLLLTFFYRYM+PL++AGKVYIA PPL Sbjct: 479 IGAGVGADFTLDDVNYDKVVIMTDADTDGAHIQVLLLTFFYRYMRPLVEAGKVYIALPPL 538 Query: 559 YKLTRKSGKLETVRYAWSDEELANYLKEFGKNFELQRYKGLGEMNPEQLWETTMNPESRN 618 YK+++ SG E V YAW ++ L +K+ G+ + +QRYKGLGEMN QLWETTM+PE+R Sbjct: 539 YKVSKGSGAKEVVEYAWDEDGLKKAIKKVGRGYTIQRYKGLGEMNATQLWETTMDPETRT 598 Query: 619 LLQVQIEDAAKAERRVSTLMGDKVDPRKRWIVENVDFTEIEE 660 L++V+I+DAA+AE+RVSTLMGDKV+PR++WI +V F EE Sbjct: 599 LIRVRIDDAARAEKRVSTLMGDKVEPRRKWIESHVAFGLEEE 640 >lin1325 [L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit Length = 301 Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust. Identities = 0/639 (0%), Positives = 0/639 (0%), Gaps = 14/639 (2%) Query: 22 YDADDIQVLEGLVAVRKRPGMYIGSTSSSGLHHLVWEIVDNAVDEHLAKFCSKIDITLRK 81 I ++ + + S V H I + Sbjct: 6 SYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPG 65 Query: 82 DGSVTVLDNGRGIPTGMHKTGVPTPQVVFTILHAXXX-XXXXXXXXXXXLHGVGASVTNA 140 R + + V+F + N Sbjct: 66 LHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNK 125 Query: 141 LSEWLEVEIYRDGKIHRQRFEYWVDKSGKEHVGEPVTGLEILGNTNKTGSKITFKPDIRV 200 + E + + V G T + I K Sbjct: 126 VDNVQEKADLLPHLQFLASQ-----MNF----LDIVPISAETGLNVDTIAAIVRKHLPEA 176 Query: 201 FPNGIALNYDTLAERVQEIAFLNSGLRIILTDERSGRQDEYFYEGGASQFVQFLNEGKDV 260 + +Y T + + + + E S + + Sbjct: 177 THH-FPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVSNERGGYDINGLI 235 Query: 261 LHDVIHFSSEKDDIEVEVALQYNAGYTETLASFVNSIPTRSGGTHETGFKTAYTRVLNEY 320 L + + + + + R L Sbjct: 236 LVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSL 295 Query: 321 ARRTQLLKEKDKNLEGNDLREGMMAVISVKMAE--VEFVGQTKDQLGSASARSAVDYIVA 378 Sbjct: 296 355 Query: 379 ENMARFLEENPQVAQSLLKKSIQXXXXXXXXXXXXDEIRSGKKRSESSNL-GGKLSPAQS 437 Sbjct: 356 415 Query: 438 KDVTRTELFIVEGDSAGGSAKQGRDSKIQAILPLKGKPMNSEKAKLLDVLKNDEFKXXXX 497 Sbjct: 416 475 Query: 498 XXXXXXXPDFAVEDSNYSKIIIMTDADTDGAHIQVLLLTFFYRYMKPLIDAGKVYIAQPP 557 Sbjct: 476 535 Query: 558 LYKLTRKSGKLETVRYAWSDEELANYLKEFGKNFELQRYKGLGEMNPEQLWETTMNPESR 617 Sbjct: 536 595 Query: 618 NLLQVQIEDAAKAERRVSTLMGDKVDPRKRWIVENVDFT 656 Sbjct: 596 634 >SP0852 [L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit Length = 647 Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/640 (56%), Positives = 465/640 (72%), Gaps = 15/640 (2%) Query: 22 YDADDIQVLEGLVAVRKRPGMYIGSTSSSGLHHLVWEIVDNAVDEHLAKFCSKIDITLRK 81 Y+ D IQVLEGL AVRKRPGMYIGST +GLHHLVWEIVDNAVDE L+ F +ID+T+ K Sbjct: 11 YNDDAIQVLEGLDAVRKRPGMYIGSTDGAGLHHLVWEIVDNAVDEALSGFGDRIDVTINK 70 Query: 82 DGSVTVLDNGRGIPTGMHKTGVPTPQVVFTILHAXXXXXXXXXXXXXXLHGVGASVTNAL 141 DGS+TV D+GRG+PTGMH G+PT +V+FTILHA LHGVG+SV NAL Sbjct: 71 DGSLTVQDHGRGMPTGMHAMGIPTVEVIFTILHAGGKFGQGGYKTSGGLHGVGSSVVNAL 130 Query: 142 SEWLEVEIYRDGKIHRQRFEYWVDKSGKEHVGEPVTGLEILGNT--NKTGSKITFKPDIR 199 S WLEVEI RDG +++QRFE + G+PVT L+ +G +KTG+K+TF PD Sbjct: 131 SSWLEVEITRDGAVYKQRFE---------NGGKPVTTLKKIGTAPKSKTGTKVTFMPDAT 181 Query: 200 VFPNGIALNYDTLAERVQEIAFLNSGLRIILTDERSGRQDEYFYEGGASQFVQFLNEGKD 259 +F Y+T++ER+ E AFL + + LTD+R+ E+ YE G FV +LNE K+ Sbjct: 182 IFST-TDFKYNTISERLNESAFLLKNVTLSLTDKRTNEAIEFHYENGVQDFVSYLNEDKE 240 Query: 260 VLHDVIHFSSEKDDIEVEVALQYNAGYTETLASFVNSIPTRSGGTHETGFKTAYTRVLNE 319 +L V++F E + +VEVALQYN G+++ + SFVN++ T+ GGTHETG K+A T+V+N+ Sbjct: 241 ILTPVLYFEGEDNGFQVEVALQYNDGFSDNILSFVNNVRTKDGGTHETGLKSAITKVMND 300 Query: 320 YARRTQLLKEKDKNLEGNDLREGMMAVISVKMAE--VEFVGQTKDQLGSASARSAVDYIV 377 YAR+T LLKEKDKNLEG+D REG+ AV+S+ + E ++F GQTKD+LGS AR VD IV Sbjct: 301 YARKTGLLKEKDKNLEGSDYREGLAAVLSILVPEEHLQFEGQTKDKLGSPLARPVVDGIV 360 Query: 378 AENMARFLEENPQVAQSLLKKSIQXXXXXXXXXXXXDEIRSGKKRSESSNL-GGKLSPAQ 436 A+ + FL EN ++A +L++K+I+ DE R+GKK + L GKL+PAQ Sbjct: 361 ADKLTFFLMENGELASNLIRKAIKARDAREAARKARDESRNGKKNKKDKGLLSGKLTPAQ 420 Query: 437 SKDVTRTELFIVEGDSAGGSAKQGRDSKIQAILPLKGKPMNSEKAKLLDVLKNDEFKXXX 496 SK+ + EL++VEGDSAGGSAKQGRD K QAILPL+GK +N+ KAK+ D+LKN+E Sbjct: 421 SKNPAKNELYLVEGDSAGGSAKQGRDRKFQAILPLRGKVVNTAKAKMADILKNEEINTMI 480 Query: 497 XXXXXXXXPDFAVEDSNYSKIIIMTDADTDGAHIQVLLLTFFYRYMKPLIDAGKVYIAQP 556 DF++ED+NY KIIIMTDADTDGAHIQ LLLTFFYRYM+PL++AG VYIA P Sbjct: 481 YTIGAGVGADFSIEDANYDKIIIMTDADTDGAHIQTLLLTFFYRYMRPLVEAGHVYIALP 540 Query: 557 PLYKLTRKSGKLETVRYAWSDEELANYLKEFGKNFELQRYKGLGEMNPEQLWETTMNPES 616 PLYK+++ GK E V YAW+D EL K+FGK LQRYKGLGEMN +QLWETTMNPE+ Sbjct: 541 PLYKMSKGKGKKEEVAYAWTDGELEELRKQFGKGATLQRYKGLGEMNADQLWETTMNPET 600 Query: 617 RNLLQVQIEDAAKAERRVSTLMGDKVDPRKRWIVENVDFT 656 R L++V IED A+AERRV+ LMGDKV+PR++WI +NV FT Sbjct: 601 RTLIRVTIEDLARAERRVNVLMGDKVEPRRKWIEDNVKFT 640 >L0290 [L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit Length = 644 Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/644 (55%), Positives = 457/644 (70%), Gaps = 15/644 (2%) Query: 22 YDADDIQVLEGLVAVRKRPGMYIGSTSSSGLHHLVWEIVDNAVDEHLAKFCSKIDITLRK 81 YD IQVLEGL AVRKRPGMYIGST +GLHHLVWEIVDNAVDE L+ F ++I +T+ Sbjct: 8 YDDSAIQVLEGLDAVRKRPGMYIGSTDGTGLHHLVWEIVDNAVDEALSGFGNRISVTINA 67 Query: 82 DGSVTVLDNGRGIPTGMHKTGVPTPQVVFTILHAXXXXXXXXXXXXXXLHGVGASVTNAL 141 DGS++V D GRG+P G H G+PT +V+FTILHA LHGVG+SV NAL Sbjct: 68 DGSLSVEDEGRGMPVGKHAMGIPTVEVIFTILHAGGKFGQGGYKTSGGLHGVGSSVVNAL 127 Query: 142 SEWLEVEIYRDGKIHRQRFEYWVDKSGKEHVGEPVTGLEILGNT--NKTGSKITFKPDIR 199 S WLEVEI RDG ++RQRFE + G P T L +G +KTG+K+TF PD Sbjct: 128 STWLEVEITRDGTVYRQRFE---------NGGHPATTLVKIGKAPKSKTGTKVTFMPDSS 178 Query: 200 VFPNGIALNYDTLAERVQEIAFLNSGLRIILTDERSGRQDEYFYEGGASQFVQFLNEGKD 259 +F Y+ ++ER+ E AFL + I L D+R+ ++E+ YE G FV +LNE KD Sbjct: 179 IFST-TEFKYNIISERLNESAFLLKEVTISLEDKRTDEKEEFHYENGVQDFVSYLNEDKD 237 Query: 260 VLHDVIHFSSEKDDIEVEVALQYNAGYTETLASFVNSIPTRSGGTHETGFKTAYTRVLNE 319 L V++F ++D EVEVALQYN GY+E + SFVN++ T+ GGTHE G KTA T+ +NE Sbjct: 238 SLTPVLYFEGKQDGFEVEVALQYNDGYSENILSFVNNVRTKDGGTHEAGLKTAITKAMNE 297 Query: 320 YARRTQLLKEKDKNLEGNDLREGMMAVISVKMAE--VEFVGQTKDQLGSASARSAVDYIV 377 YAR+ LLKEKDKNLEG+D REG+ V+SV + E ++F GQTKD+LGS AR VD +V Sbjct: 298 YARKVNLLKEKDKNLEGSDYREGLTVVLSVLIPEEHLQFEGQTKDKLGSPLARPVVDSLV 357 Query: 378 AENMARFLEENPQVAQSLLKKSIQXXXXXXXXXXXXDEIRSGKK-RSESSNLGGKLSPAQ 436 +E ++ +L EN ++AQ+L++K+I+ ++ R+GKK + + L GKL+PAQ Sbjct: 358 SEKLSFYLMENGELAQNLIRKAIKAREAREAARKAREDSRNGKKSKKDKGLLSGKLTPAQ 417 Query: 437 SKDVTRTELFIVEGDSAGGSAKQGRDSKIQAILPLKGKPMNSEKAKLLDVLKNDEFKXXX 496 +K+ + EL++VEGDSAGGSAKQGRD K QAILPL+GK +N+EKAK+ D+LKN+E Sbjct: 418 TKNPNKNELYLVEGDSAGGSAKQGRDRKFQAILPLRGKVINTEKAKMQDILKNEEINTMI 477 Query: 497 XXXXXXXXPDFAVEDSNYSKIIIMTDADTDGAHIQVLLLTFFYRYMKPLIDAGKVYIAQP 556 DF + D NY KIIIMTDADTDGAHIQ LLLTFFYRYMKPL++AG VYIA P Sbjct: 478 YTIGAGVGADFTLADRNYDKIIIMTDADTDGAHIQTLLLTFFYRYMKPLVEAGHVYIALP 537 Query: 557 PLYKLTRKSGKLETVRYAWSDEELANYLKEFGKNFELQRYKGLGEMNPEQLWETTMNPES 616 PLYK++ GK E + YAW+D ELA K+FGKN LQRYKGLGEMN +QLWETTM+PE+ Sbjct: 538 PLYKMSEGKGKKEKIEYAWTDGELAELRKQFGKNANLQRYKGLGEMNADQLWETTMDPET 597 Query: 617 RNLLQVQIEDAAKAERRVSTLMGDKVDPRKRWIVENVDFTEIEE 660 R L+QV I+DAA+AE+RVS LMGDKV+PR++WI NV FT EE Sbjct: 598 RTLIQVTIDDAAQAEKRVSVLMGDKVEPRRKWIENNVKFTMEEE 641 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.315 0.133 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 46,518,518 Number of extensions: 1942389 Number of successful extensions: 4501 Number of sequences better than 1.0e-05: 101 Number of HSP's gapped: 3823 Number of HSP's successfully gapped: 151 Length of query: 660 Length of database: 38,378,431 Length adjustment: 113 Effective length of query: 547 Effective length of database: 25,345,689 Effective search space: 13864091883 Effective search space used: 13864091883 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 119 (50.4 bits)