BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0345.0023.p
         (221 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BH0997 [R] COG2738 Predicted Zn-dependent protease                    210   1e-54
BH1677 [R] COG2738 Predicted Zn-dependent protease                    187   1e-47

>BH0997 [R] COG2738 Predicted Zn-dependent protease
          Length = 226

 Score =  210 bits (535), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 101/190 (53%), Positives = 137/190 (72%), Gaps = 1/190 (0%)

Query: 1   MYLLVIIAFLFSLWAQFRVKGNFNKWAKVANTSGMTGYDAARRMLDANGLGDVPIEPVR- 59
           M +L+  A   +LWAQ +VKGNF KW++VA +S  TG   AR +LD  GL  V +E  + 
Sbjct: 6   MDILIFAALGLALWAQSKVKGNFQKWSRVAASSNATGAQVARFILDKEGLHHVKVERSKS 65

Query: 60  GALSDHYDPIHRVVRLSEPVYYERSIAAISVACHEVGHAIQHKVHYPMLTLRHRMFPVVN 119
           G LSDHYDP  + VRLS+PVY   SI+A++VA HEVGHAIQ + +Y ML +RHR+FPV +
Sbjct: 66  GTLSDHYDPRAKTVRLSDPVYQGHSISALAVAAHEVGHAIQDQHNYTMLVIRHRLFPVAS 125

Query: 120 IASGVAPFMLLAGFLFSSFNLIGLGIIFFSAAVAFQLVTLPVEFNASNRARQVMVEQGYI 179
           I S +AP++ +AGFL    NLIG+GII FS AV FQ+VTLPVEF+AS RA+  +++ G I
Sbjct: 126 IGSQLAPWLFIAGFLLEMTNLIGVGIILFSGAVLFQVVTLPVEFDASKRAKDKLLQLGLI 185

Query: 180 RNEEERGVAK 189
           ++ EE+G+ +
Sbjct: 186 QSREEKGIGQ 195


>BH1677 [R] COG2738 Predicted Zn-dependent protease
          Length = 224

 Score =  187 bits (475), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 100/219 (45%), Positives = 129/219 (58%), Gaps = 4/219 (1%)

Query: 3   LLVIIAFLFSLWAQFRVKGNFNKWAKVANTSGMTGYDAARRMLDANGLGDVPIEPVRGAL 62
           LL+II     LWAQ +VK  + K++KV  +SGMTG   AR++LD NGL DV +E VRG L
Sbjct: 9   LLIII----PLWAQMKVKSAYKKYSKVPASSGMTGAQVARKILDDNGLYDVRVEEVRGTL 64

Query: 63  SDHYDPIHRVVRLSEPVYYERSIAAISVACHEVGHAIQHKVHYPMLTLRHRMFPVVNIAS 122
           +DHYDP  + VRLS   ++  S+A  +VA HEVGHAIQ    Y  L  RH + PV N  S
Sbjct: 65  TDHYDPRDQTVRLSSQNFHGTSVAGAAVAAHEVGHAIQDAHDYAFLRFRHALVPVANFGS 124

Query: 123 GVAPFMLLAGFLFSSFNLIGLGIIFFSAAVAFQLVTLPVEFNASNRARQVMVEQGYIRNE 182
             +  +++AG L  +  L+ LGI+F +AAV FQLVTLPVEF+ASNRA   +V  G IRN+
Sbjct: 125 NFSFILIIAGILMQASGLLLLGIVFMAAAVLFQLVTLPVEFDASNRAMSQIVSAGVIRND 184

Query: 183 EERGVAKXXXXXXXXXXXXXXXXXXXXXXXITMFLGNRD 221
           EER   K                       I M++G  D
Sbjct: 185 EERETRKVLNAAALTYVAGALVALLELARFILMYIGMND 223


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.328    0.140    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 14,071,133
Number of extensions: 522404
Number of successful extensions: 2792
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 2791
Number of HSP's successfully gapped: 2
Length of query: 221
Length of database: 38,378,431
Length adjustment: 102
Effective length of query: 119
Effective length of database: 26,614,363
Effective search space: 3167109197
Effective search space used: 3167109197
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 114 (48.5 bits)