BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0342.0015.p
         (201 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

all2223 [KR] COG0454 Histone acetyltransferase HPA2 and related ...    53   2e-07
Ta0277 [KR] COG0454 Histone acetyltransferase HPA2 and related a...    49   6e-06

>all2223 [KR] COG0454 Histone acetyltransferase HPA2 and related
           acetyltransferases
          Length = 153

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 12/127 (9%)

Query: 58  TVEDIPIYEKRYLE---ETPEQADEIDD--SEYINNPDQVVYLAFAEQQAVGRI------ 106
           T ED  +  + Y +   E P   D+++   +E    P+   Y+A+  QQ VG        
Sbjct: 9   THEDWSVLNQLYADMDGEPPLPNDDLEKIFAEIAQVPNYHTYIAYLNQQPVGTFSLLYAP 68

Query: 107 -VLKKNWNRYALIDMIQVDKPFRRHGIGRQLMEQAKCWALERGLPGVMLETQSINVRACR 165
            ++ + ++++A++D + V    R  GIG Q+++ A   + + G   VML +     RA +
Sbjct: 69  TMMHRGYHKFAVLDSVTVISSMRGEGIGSQMVKAALKLSADAGCYKVMLSSNLKRSRAHQ 128

Query: 166 FYESCGF 172
           FY+S GF
Sbjct: 129 FYQSLGF 135


>Ta0277 [KR] COG0454 Histone acetyltransferase HPA2 and related
           acetyltransferases
          Length = 179

 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 5/124 (4%)

Query: 66  EKRYLEETPEQADEIDDSEYINNPDQVVYLAFAEQQAVGRIVLKKNW---NRYALIDMIQ 122
           EK YL        E  + E I + D +  +A  +++ VG + +++     N++     I 
Sbjct: 36  EKVYLVGEYYMLTERAEQERIKSLDDLTLVAVLDRKVVGVLTVQRGIYRKNKHTASLGIA 95

Query: 123 VDKPFRRHGIGRQLMEQAKCWALERGLPGVMLETQSINVRACRFYESCGFVIGGF--DQY 180
           +    R  GIG ++++QA  W  ++G+  + LE  S NV A   Y+  GF I GF   Q+
Sbjct: 96  IMAGHRHKGIGTRMIKQAIEWCEDQGIKKLNLEVFSTNVNAINAYKKIGFEIEGFRKKQF 155

Query: 181 VYKG 184
           + +G
Sbjct: 156 LIEG 159


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.322    0.138    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 15,034,154
Number of extensions: 614184
Number of successful extensions: 1647
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1659
Number of HSP's successfully gapped: 2
Length of query: 201
Length of database: 38,378,431
Length adjustment: 101
Effective length of query: 100
Effective length of database: 26,729,697
Effective search space: 2672969700
Effective search space used: 2672969700
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)